Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                                                                      --------->AHL20(1)                           ----------->GT1                                            <---------AHL20(1)                        <---------AHL20(2)                                          ------->TEIL    -                       <---------AHL20(1)                                        <---------YAB1    <-    <-------TEIL       --------->AHL20(2)                                --------->ATHB12 <---------- -------->ARR14(2)     --------->AHL20(1)                               --------->ICU4--------->ARR11(3) ---AGL1     ------>ZmHOX2a(1)          <-----------RAV1(1)             <---------YAB1<---------ARR11(3)   caaatattcatcgtcctctcgcgaatataatgtgaatagaaaatgttgcaatatagataactcatggtttagtacttattgatatgaatattttacttaa  19446000          <-------TEIL      --------------->AtSPL8                                                                 <------- >>>>>>>>>ARR2                                                     <---------SPL7        --------->MYB46(3) >>>>>>>>>ARR1             ---------->DOF2                        --------->RAP2.6(2)   --------->ANAC58 >ANAC55(2)         <---------AHL20(2)           --------->At4g35610                    --------->ANAC46 -------->ATHB12   <---------AHL20(2)            <---------At4g35610             --------------->AtSPL8 --------YAB1      --------->AHL20(2) <---------AHL20(2)         --------------->AtSPL3 --------->ANAC58 -GT1 <---------------AtSPL8       --------->AHL20(1) --------->TOE2(3)     --------->At4g35610     <   tatgattgtaagtacattctattaattttaaaagacatatattaatcgtgcagcatccataaactaagccgtacaaatagctcaatgtacacccaataac  19446100                                                                        <---------CCA1(2)                                                                      --------->YAB1    <----------ID1                                                                 <---------YAB1<---------YAB1                                                              <---------AHL20(2)--------->YAB1       ---------->DOF2                  ------------>CBF<------ZmHOX2a(2)<---------ARR11(1) --ATHB12                     <---------ZAT18          <---------ARR11(3)<---------ARR11(3) ---------CCA1(2)        --------------------->WRI1    --------->ARR11(3)--------->ARR11(3)   ccatctctccaaagaggccataggcttcttagttcccttcgaaacaatctccaagacgatctattttcttattcatatcttatgataaaaaaaacaaata  19446200                                                                  --------->ZAT14                                                                  <---------ZAT18                                                                  --------->ZAT18                                                        --------->MYB52(1)                      --------->CCA1(2)              --------->ANAC58             --------->WOX13(1)                      --------->ANAC46          --------->ARR11(3)                   --------->LBD16 <---------ANAC58          <---------ARR11(3)                  <---------------AGL15 ------->TEIL         --------->RVE1(1)               ---------->ARF1----------->RAV1(1)         --------->CCA1(1)     --------->TOE2(3)     --------->ANAC58                       <--------     <---------AHL20(2)        --------->TOE1(3)   ---------->DOF2<---------ZAT14          --------->LBD16     --------->AHL20(2)<-------TEIL     <-----------HVH21      <---------ANAC58            --------->ANAC46   ctagtatttaaatatctatcaaagattcaaaacccttaaccctgtctcccccaagaagcaacagtgagtgcacccttacgaggcatttgctcccccaaac  19446300                                                                       <---------ANAC58                                                                       <---------ANAC46                    ------->MYC3                                     <<<<<<<<<<AtWER                   --------->ANAC58                                <---------ANAC58                   --------->O2        --------->AtLEC2            <---------ANAC58                   --------->ANAC58   <-------MYC3               --------->AtLEC2                 <---------ALFIN1     ------->MYC3            <-------TEIL                <---------REM1(2)     ------->MYC2       <---------ALFIN1            <-------TEIL   <---------ALFIN1--------->ANAC46   <-------MYC2     <---------ALFIN1<---------ANAC58  <---------ARR14(2)  --------->MYB46(3)<-------MYC3   <---------ALFIN1    ----------->RAV1(1)   <---------AHL20(2) -ALFIN1----------------------->TaNAC69(2)            --------->MYB46(3)  <---------ARR14(2) <-------   ttcatccactctctagcctccacgcgtctcaaactctccacatgcacaaactctcacccacacattcatgcatgcgtatataatacattcgtattccgat  19446400                                                                          --------->ANAC46                                                                          --------->ANAC58                                                                    --------->ANAC58                                                                    --------->ANAC58           ------                                                                    --------->ANAC46       --------->ANAC46                                                                  --------->MYB52(1)       --------->ANAC58                                                             --------->RAP2.6(2)        <------ZmHOX2a(2)                                                             ------>NtERF2--------->ANAC58 --------->ANAC58                                 --------->At4g35610        <---------ANAC46            =============                              <---------At4g35610           <---------ANAC58           <---------ARR11(3)                              --------->At4g35610           <---------ANAC58           --------->ARR11(3)                              <---------ZAT14               <---------ATERF1(2)       --------->GLK1(1)                    --------->CCA1(2)                       <---------RAP2.6(2)       <---------GLK1(1)                   <---------ARR11(3)                       --------->ATERF1(2)     <------NtERF2                   --------->ARR11(3)                       <---------DEAR3(1)     --------->LBD16                   --------->ARR11(1)      <---------bZIP60(1)------>NtERF2      <---------LBD16  ---------->DOF2  --------->ARR14(2)      --------->bZIP60(1)<------NtERF2  XXXXXXXXXXXXXXXXXXXX>MIR2112-5P --YAB1            <---------ARR14(2)   ----------->HVH21  --------->RAP2.6(3)---------->DOF2 -------   agactaaagaagagcgagagagatatggagagagcagaggccttgacatcatcgtttatatggcggccaaacgcaaacgcaaacgcggagatcacgccga  19446500                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                         ----------->ARR10                                                                                        <------NtERF2                                                                                       ------>NtERF2                                                                                       <---------At4g35610                      --------->ZAT6                                                   --------->LBD16                 ------>ZmHOX2a(1)                                                    <---------ANAC46               ------>ZmHOX2a(2)                                                      ----------->RAV1(1)              <------ZmHOX2a(2)                                                      --------->RAP2.3(1)             --------->ARR11(3)                                                     <---------ATERF1(1)             <---------ARR11(3)                                                     <---------At4g35610             <---------ARR14(2)                                                     ------>NtERF2       <---------ARR11(3)                                                    ---------->DOF2       --------->ARR11(3)---------->DOF2                                  --------->HSFB2a(2) >NtERF2  --------->ALFIN1                 --------->MYB46(3)    --------->ANAC58   --------->At4g35610 =======================HOX2a_HOX2a     --------->REM1(1)        --------->ANAC58  <---------ATERF1(1) -->DEAR3(1) --------->ARR14(2)   <---------MYB52(1)   <---------ALFIN1   <---------HSFB2a(2)     XXX   gttgtccaagatgtggatcctctaacacaaagttctgttactacaacaactatagcctcactcagcctcgctacttctgcaaaggctgccgcagatattg  19446600                                                          --------->RAP2.3(3)                                                         <------NtERF2                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                        --------->ABI4(1)                                                       <---------ATERF1(1)                                                       --------->RAP2.3(3)                                                       --------->RRTF1(2)                                                       --------->RRTF1(3)                                                       <---------ALFIN1                                                       --------->RAP2.3(2)                                                       <---------ATERF1(2)                                                       --------->ATERF1(2)                                                      --------->RAP2.6(1)                                                      <------NtERF2                                               --------->GLK1(1) --------->YAB1                                      <------NtERF2   --------->ORA47(2)                                     <---------MYB46(3)--------->RAP2.6(2)                                     --------->MYB55(2)--------->DEAR3(1)                                     ------>NtERF2    --------->ATERF1(1)                                    <---------DEAR3(1)--------->RRTF1(1)                                    --------->ALFIN1  --------->ERF1                                   --------->ATERF1(1)--------->RAP2.3(1)                     --------->HSFB2a(1)       <---------GLK1(1)<---------ATHB12                     <---------HSFB2a(1)   <---------ETT(2) <---------ALFIN1                --------->ANAC46   <------NtERF2--------->ARR14(2)                --------->ANAC58   <-------GAMYB<---------ARR14(2)               <---------LBD16    <---------MYB46(3)  --------->DEAR4(2)                          <--         <---------PCF2           <---------ATERF1(1)<---------ATERF1(1)                          ---       <---------MYB46(3)         <---------DEAR4(2) ------>NtERF2                     --------->ZAT6      --------->ALFIN1     ------>ZmHOX2a(1)   --------->HSFB2a(1)            --------->ZAT6    <----   --------->DAG2--------->LBD16  <---------ORA47(2) --------->LBD16     ----------->GT1        ----- ---------->DOF2--------->ANAC58 <---------DEAR3(1)<---------LBD16      --------->HSFB2a(2)     ----- XXXXXXXXXXXXXXXXX>MIR319A/B     <---------DREB2C(2)--------->ANAC46    <---------HSFB2a(2)   <------   gaccaaaggtggttccctccgcaatgttcctgtaggcggtggctgtcgaaaatcccgccgccccaaatcatcttctggtaacaatactaaaactagccta  19446700                     <---------MYB46(3)                     --------->MYB55(2)                    <---------DEAR3(1)      <---------ICU4<---------AtMYB61  --------------->AGL15           <---------ATHB12  <---------------AGL15          --------->ANAC58 <-----------------AGL3 <---------MYB46(3)                                            ------->TEIL <---------MYB52(1) --------->ALFIN1       ----------------------->TaNAC69(2)   ----------->HVH21 ----------AtMYB77 <---------MYB52(1)     ------>ZmHOX2a(2)      <---------ANAC58     <---------ARR11(1) ------>MYB46(3)  --------->LBD16--------->ANAC58       --------->ANAC46        ----------->TGA1  --- -----ARR14(2)   <---------DEAR3(1)     --------->ARR11(3)       <---------ANAC46     --------->GLK1(2) ---->ARR14(2)  <---------LBD16  ------>MYB83           --------->ANAC58      ----------->RAV1(2) --- ---->MYB52(1) ------->GAMYB     ------>MYB46(1)        --------->ANAC58  ---------->DOF2         --- ---MYB59    -------->P<---------AtMYB61<---------ARR11(3)       <---------ANAC58--------->MYB52(1)   accgctaattctggcaaccccggtggtggttcaccaagcatcgatcttgctcttgtttacgccaatttcttgaatccaaagcctgacgaatctatactac  19446800                                                                                                   <-                                                                                                  ---                                                 <---------ALFIN1                                ----                                               --------->LBD16                                   <---                                              <---------ATERF1(2)                              ------                                              --------->ATERF1(2)                              <-----                                             --------->DEAR3(2)                               -------                         <---------RVE1(1)   --------->RAP2.6(3)                      <---------ICU4                        <---------ARR14(2)  --------->MYB52(1)                        --------->YAB1-       <---------RAP2.6(2)       <--------P ------>MYB46(1)                           <--------ATHB1< ------>ANAC46          <---------GLK1(2)   ------>MYB83        <-----------HVH21    --------->ICU4-- ------>ANAC58          --------->ARR14(2)  -------->P <---------AtLEC2<---------ANAC46       <------ ------>ANAC58      <---------LBD16        ------>ZmHOX2a(1)------->TEIL             <---------ATHB12   aagaaaattgcgacttagccactacggattttttggtagataatcctaccggcacttccatggacccttcatggagtatggacatcaatgatggtcatca  19446900  Previous    Next  AGI:  At3g52440.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF3.5 (DOF3.5) [Arabidopsis Thaliana] (GB:Q9SVC5); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G21340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO50159.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 19446425    to: 19447168    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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