Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   --------->ALFIN1                                                               --------->ALFIN1                   <---------CCA1(1)                           ================================RAV                  <---------ARR11(3)                           <-----------RAV1(1)                  --------->ARR11(3)                 --------->ALFIN1              ----------->RAV1(2)   <---------ARR11(3)                              <---------ANAC58                ------>ZmHOX2a(1)   <---------ARR11(1)            --------->ICU4    <---------ANAC46          <---------HSFB2a(1)   --------->ARR11(3)   <---------YAB1             <---------ANAC58          --------->HSFB2a(1)   --------->ARR14(2)--------->ICU4          <---------ZAT6   ------->MYC2   <---------HSFC1(2)   <---------ARR14(2)<---------YAB1        <---------ANAC58   <-------MYC3   --------->HSFC1(2)  <---------ARR14(1) <---------AHL20(2)    <---------ANAC58   <-------MYC2  --------->ANAC58     <---  <---------CCA1(2)<---------RVE1(1)   --------->At4g35610    ------->MYC3  --------->ANAC58    -----   taccatatcttaagggaagagatattattacagagatgatgagatgagtgtgagcgtggaagcatgtgtgggagtgagaagcatcctctgggcctggagg  19294700                                             <----------DOF2                                            =====================HOX2a_HOX2a                                            ------>ZmHOX2a(2)                                          <---------ARR11(3)              <---------ARR11(3)                                      ===========================HOX2a_HOX2a                                      ------>ZmHOX2a(2)                  <---------CCA1(2)                                    --------->ARR11(3)               --------->AHL20(2)                        ===========================HOX2a_HOX2a     <----------DOF2       <---------YAB1   =====================HOX2a_HOX2a  ------>ZmHOX2a(1)   <---------At4g35610  ------>ZmHOX2a(1) --------->ARR11(3)   --------->YAB1<----------DOF2 ----GAMYB         --------->REM1(1)<---------ARR11(3)   --------->TOE2(3)--------->ARR11(3) ------>GT1--------->ALFIN1  <---------MYB52(1) <---------ARR11(3)<---------ICU4   gttacagctatgagtgtgactacatcctctcgttactcgatcttgatctttatcttcttcctcattcatctttatatatctttgattctgaggtccaaac  19294800        ---------->DOF2    ------>ZmHOX2a(2)   <---------GLK1(1)   --------->GLK1(1)   <------ZmHOX2a(2)  --------->ARR14(2)                                <---------AHL20(2)  --------->ARR14(3)                                --------->ICU4  <---------AGP1  ----------->RAV1(2)               <---------YAB1     <---------TOE2(3)  --------->ARR11(3)                      --------->YAB1  <---------TOE1(3)  --------->ICU4  <---------ARR11(3)                      <---------ICU4  <---------TOE2(3)---------->DOF2  <---------ARR14(3)       <---------MYB52(1)----------->GT1     <---------YAB1    <---------ANAC46  <---------ARR14(2)     <---------YAB1  --------->ICU4<---------YAB1 ---------->DOF2       ---------   tcaagatctccaaagaaaacacctgttctgtttgggacatagaattatggtgatattattagggtttttgattaaagtaaagatggtgttgaagaatatg  19294900                                               --------->AHL20(2)                                               <---------AHL20(2)                                           <---------YAB1                --------->ARR11(3)                                       <----------DOF2                   --------->GLK1(2)       <---------YAB1            <---------WRKY12                  ----------->GT1       <---------TOE2(3)         <---------ZAT18                 ---------->DOF2        ---------->DOF2    <---------WOX13(1)           <---------WRKY45              --------->ANAC58        --------->YAB1  --------->ATHB12    --------->AHL20(2)   <---------AHL20(2)  --------->ANAC58      --------->GLK1(2) >GLK1(2)     <---------MYB46(3) <---------WRKY38(1)  <---------bZIP60(2)<---------ARR11(3)   ttcttgattaacatagtggatgaataaaacagtagtcaactctttataattttttgacatggcccaagaaagaaaaatcttacagagaatcaaagttaga  19295000               --------->ZAT14            ------>ZmHOX2a(1)----------->RAV1(1)     --------->MYB52(2)     --------->REM1(1)     <---------MYB46(3)     --------->MYB46(3)     <------MYB83         ----------->RAV1(1)                <---------DAG2        --------->AHL20(2)     <------MYB46(1)<---------ICU4                           <----------DOF2    --------->TOE2(3)    <---------TOE2(2)  --------->AtLEC2               --------->ATHB12          --------->TOE1(3)    <---------TOE1(2)<---------ANAC58               <---------WOX13(1)          --------------->AGL15   <---------MYB52(1)<---------ANAC58             --------->ATHB12       <---------TOE2(3)   aactcgttggtttcctctgcaatccttgcaacaacaaaacatccaagtacaaagattgataggctttttggttttgagattaccttaaaatgtttttttt  19295100                                                                                                  <--                                                                                                  <--                                                                                               <-----                                                           --------->ANAC58                    ------                                                         ---------->DOF2                       <-----                     ----------->GT1            ------------>CBF               <---------ALFIN1<-----          ------>MYB83                      --------->ANAC58            --------->ARR14(2)     ------          ------>MYB46(1)                   --------->ANAC58       <---------At5g28300 <---------ATHB12        <---------MYB59         <---------HSFB2a(2)   --------->ANAC58  <---------ARR14(2)     ------        <---------MYB46(2)      --------->HSFB2a(2)   --------->ANAC58 <---------CCA1(2)    ---------        <---------MYB111(1)  <-----------GT1--------->ANAC46      <-----------GT1  ------------>CBF--  --------------->AtSPL8*TSS<---------YAB1 <---------LBD16 --------->ANAC58 --------->LBD16 ---------   tttgtctgtaccaaactttgaaatggttttattactagaaattacgacggaacaataagcaaagccatttaccatatccccagaccccaatgaataatat  19295200     ---------->DOF2                                                                         -------- <---------YAB1                                                                              -------- -------AHL20(2)                                                                             -------- -------YAB1                                                                                 <------- ----AHL20(1)                                                                                -------- --->AHL20(1)                                                                                -------- ----AHL20(2)                                                                          <------------CBF ----ARR11(3)                                <---------ANAC58                     <-----------GT1 --->AHL20(2)                                <---------ANAC58                   --------------------- --->ARR11(3)                 <------------CBF                    =================================== >AHL20(2)                 ------------>CBF  <---------ANAC46     <----------DOF2<-----------GT1 ------->YAB1       <----------DOF2   <------------CBF=============================================== >YAB1      <------------CBF  <<<<<<<<<<<<WRKY18      ---------->DOF2  <XXXXXXXXXXXXXXXXXXXXMIR1888   attataagaaagagaattggttctttaatgtcaattgtcaaattgtttcgtatagaaaaagaagaagacttttctcatggattttaacttattgcacgtc  19295300                             ------->MYC3                             <-------MYC3                            --------->ANAC58                            --------->ANAC55(2)                         --------->ARR14(2)     --------->AHL20(2)  <---------ARR14(2)    --------->ICU4      ------>NtERF2    <---------YAB1      <------NtERF2  --------->YAB1       <---------ZAT18  <--------HAHB4       ----------->HVH21  <---------ICU4       <---------SPL7 <---------YAB1       <---------ANAC58 <---------ATHB12     <---------ANAC58 ->ANAC46           ------>NtERF2 ->ANAC58          <---------DEAR3(1)                                     --------->CCA1(2) ->ANAC58        *TSS <---------ANAC46             --------->YAB1      ----------->ARR10          <-- --TGA1a         <---------At4g35610               <---------ICU4  ------>NtERF2                  <-- ->O2--------->ATHB51<------NtERF2                <---------YAB1  --------->LBD16                 <-- ->TGA1a         --------->At4g35610            --------->YAB1   --------->HSFB2a(2)         <------- -->TaNAC69(2)  --------->MYB52(2)      ------->MYC3             <---------HSFB2a(2)   --------->ANAC58 ==bZIP_DOF    --------->ZAT18          <-------MYC3         <---------ANAC58          --------->ANAC58 ==bZIP_DOF <---------ZAT6  --------->ANAC58   <---------YAB1<---------ANAC58      <---------HSFB2a(2)   tctatcattatttagtgttcgctggcggacacgttttgtaaacgtgtttatcatcatcatcttgcttcccgacgagatttgagttcaagaagcaaaaatg  19295400                                                          ----------------->AGL1          --------->ANAC58                           --------->ATHB12               --------->DAG2    <-------TEIL                               <----------DOF2                    ---------->DOF2 -------ANAC58                 <---------At4g35610  <---------YAB1      ---------->DOF2 <-------TEIL -------ANAC46           <---------ZAT6        <---------DAG2         --------->HSFB2a(2) -------ANAC58    <---------ANAC46        <-----------GT1 ----------------->AG  --------->YAB1      < --ICU4   --------->ANAC58     --------->At4g35610 <-----------GT1    <---------HSFB2a(2)          <-   gcgagtttcatcaaggcatggggtttagtgatcatctcactgtgttacacttttttcattgccaaattggttccaaaaggaatcaaaaggctcatactat  19295500                                        <---------ARR11(3)            <----------DOF2                                        <---------AHL20(1)        --------->ANAC58                                        --------->ARR11(3)        --------->ANAC58                                  <---------ANAC58               --------->RAP2.6(3)                                  <---------ANAC58          <------NtERF2            ------>ZmHOX2a(1)  <----------DOF2 ------>ZmHOX2a(1)--------->MYB52(1)      --------->ANAC58           --------->TOE2(3)  <---------DAG2  <---------ANAC58 ----------->HVH21        --------->ANAC58 -----------GT1            <-----------GT1 <-----------GT1--------->ANAC46       <---------ANAC58 ----------GT1          --------------->AtSPL8<---------ANAC58<-----------HVH21  <---------ANAC58   ttttccctgtcttcctcattttcttcatagtacctttcttgatatattccttacatttactcggcatcacggctttcttcatcgcttggctagcaaattt  19295600  Previous    Next  AGI:  At3g51960.1    Description:  bZIP family transcription factor. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G16770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72907.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 19293579    to: 19295124    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51970.1    Description:  ATSAT1 (ARABIDOPSIS THALIANA STEROL O-ACYLTRANSFERASE 1); acyltransferase. similar to long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein [Arabidopsis thaliana] (TAIR:AT5G55340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14447.1); contains InterPro domain Wax synthase (InterPro:IPR017088); contains InterPro domain Membrane bound O-acyl transferase, MBOAT (InterPro:IPR004299) Range:  from: 19295317    to: 19296560    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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