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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                          ------>ZmHOX2a(1)
                                                                         <---------MYB59
                                                                      <---------PCF2
                                                                      --------->TCP15(1)
                                                                     <------MYB83
                                                                     <------MYB46(1)
                                                                    <---------MYB46(3)
  --------->TOE2(3)                                                 --------->MYB59
------>MYB46(1)     <-----------GT1  <----------DOF2               --------->ALFIN1                -
------>MYB83   <---------YAB1      <---------DAG2               --------->DAG2        ----------->GT1
--------MYB59--------->YAB1  <---------AtLEC2  <---------YAB1 ---------->DOF2--------->ZAT6    -----
 
accaaacttaacccaattacaatttgccatttgcatcactctttgtttttatatttgtaaaacacaaaaggtgggtcctaatactaacaatgtgaaaacc  19275900
                                                                                --------->HSFC1(2)
                              --------->HSFB2a(1)                               <---------HSFC1(2)
                              <---------HSFC1(2)                                --------->HSFB2a(1)
          ------>ZmHOX2a(1)   <---------HSFB2a(1)                           --------->LBD16
   <---------ZAT14            --------->HSFC1(2)                           --------->HSFC1(1)
   --------->SPL7         --------->LBD16                                  --------->HSFB2a(2)
   --------->ZAT14       --------->HSFB2a(2)                               <---------HSFB2a(2)
 <---------SPL1(2)       --------->HSFC1(1)               <---------------AtSPL8<---------HSFB2a(1)
 <---------SPL7          <---------HSFC1(1)              --------->DAG2    <---------HSFC1(1)      <
-------------->AtSPL3    <---------HSFB2a(2)            ---------->DOF2 <---------ARR14(2)         <
---->AtMYB61          <---------ARR14(2)         <-------TEIL           --------->ARR14(2)         <
 
ataccgtacagtcctcaattacgaagttccagaagtttcgactattcgaatgtgcatcaaaaaggtccaaaaccgtttccagaagtttctaatttctaac  19276000
               <---------AHL20(2)
               --------->AHL20(2)
               <--------ATHB1
              <---------YAB1
              --------->ICU4
            --------->YAB1
            <---------ICU4
           <---------YAB1                                                           --------->TOE2(3)
           --------->ICU4                                                          --------->bZIP60(2)
         --------->YAB1                                                           ------>NtERF2
        <---------YAB1                                                           <---------ALFIN1  <
  <---------ZAT14           --------->AHL20(1)                                --------->ANAC58     <
  --------->ZAT14    <-----------GT1                                        ---------->DOF2        <
  <---------ZAT18 <---------ICU4                                       --------------->AGL15       <
  --------->ZAT18--------->ICU4                 --------->YAB1         ------>ZmHOX2a(1)           <
--------------->AtSPL8      --------->AHL20(2) <---------YAB1          <---------------AGL15       <
<---------------AtSPL8      <---------AHL20(1)<---------ARR11(3)      <-----------------AGL3 <------
---------ANAC58--------->YAB1  --------->AHL20(2)             <-----------GT1 --------->ANAC58     <
---------ANAC46<---------ICU4  <---------AHL20(2)         <----------DOF2----------->TBP <---------ICU4
---------ANAC58<---------AHL20(1)             --------->ARR11(3)      ----------------->AGL3 -------
 
ttgagtgtactataataataatttttacaaatattttaatcaaatctaatatcatcactcactttctactcttcctatataaagccacctcaaaattatc  19276100
        <-----------GT1
      ----------------------->TaNAC69(2)
---------bZIP60(2)           ------->GAMYB
---------ANAC58    --------->ANAC46
---------O2  ------>MYB83  <---------At4g35610
---------ANAC58  <---------ALFIN1
---------ANAC55(2) --------->ANAC58                                             ------->TEIL
---------ANAC55(1) --------->ANAC58                                  --------->LBD16
---ARR11(3)  ------>MYB46(1)--------->MYB46(3)                   <---------ARR14(2)
---------ANAC46 ------>ZmHOX2a(1)        ------->TEIL            --------->GLK1(2)               ---
-->ARR11(3)<---------MYB59 --------->At4g35610   <---------ETT(1)--------->ARR14(2)     <---------LBD16
 
ttacgtggacattaccttcctcactccatcaactgccataaacgaacttaatccgaccagtttttcaaaatccgaagatgatgaactcaacttcggagac  19276200
                                                                                               <----
                                                                                             <------
                                                                                         --------->SPL7
                                                                                       --------->LBD16
                                  ----------------->AG                                <---------HSFB2a(2)
                            <---------AHL20(2)                                        --------->HSFB2a(2)
                  --------->GLK1(2)                               <------ZmHOX2a(1)   --------->ANAC46
                  --------->ARR11(3)                           <-----------RAV1(2)   <---------LBD16
          --------->YAB1    --------->AHL20(2)               --------->TOE2(3)      <---------LBD16
         <---------ATHB12 <----------DOF2                --------->DOF5.7(2)    --------->ARR14(2)
         --------->ICU4 ---------->ID1                   <---------MYB52(1)    <---------CCA1(2)   <
    --------->YAB1<-----------ARR10  <------------CBF   <-----------HVH21      <---------MYB52(1) --
-------->GT1     <---------GLK1(2)------------>CBF     --------->ANAC46   ------->TEIL--------->LBD16
 
tggttaatcgaaatcatcaagaatcttgtctttaatttccaattgggtttttcaaaacccgttacctcaggatgatgaacccgtttctcccggaaggctg  19276300
               --------->MYB46(3)
             --------->AtMYB61
             <---------ALFIN1
          --------->AtMYB61
          <---------ALFIN1
          --------->DEAR3(1)
       --------->DEAR3(1)
       <---------ALFIN1
       --------->AtMYB61
      --------->MYB46(3)
    <---------ALFIN1--------->MYB52(1)
    --------->AtMYB61
    --------->DEAR3(1)   <---------ANAC46
   --------->MYB46(3) <---------ATHB12                                      <---------AtMYB61
--------->MYB46(3)--------->MYB46(3)             --------->AtMYB61<---------ARR11(3)
--NtERF2 --------->MYB46(3)                   <---------ALFIN1  --------->ANAC58
---DEAR3(1)----------->RAV1(1)     --------->ANAC58             --------->ANAC46       ------>ZmHOX2a(2)
------ZmHOX2a(2) --------->ANAC58  --------->ANAC46             --------->ANAC58<---------MYB46(3)
------->ARR14(2) --------->ANAC58  --------->ANAC58       ----------->HVH21 --------->ALFIN1       <
 
cgatccaccaccaccaccacaaccaatggagggtttacacgaaaatgctccacctccatttctgaccaagacatttgagatggtggatgatccaaacact  19276400
         <---------ANAC46                                                     <-----------TGA1
       --------->ARR14(2)                     --------->GLK1(1)               <-----------HVH21
       <---------ARR14(2)                    <---------ARR14(2)              --------->bZIP60(2)
       <---------ARR11(1)                    --------->ARR14(2)              --------->ANAC46
       ------->TEIL                    ----------->RAV1(2)                  ------>ZmHOX2a(1)
       --------->ARR11(3)            <---------ANAC58                   ------>ZmHOX2a(1)
      <---------ARR14(1)             <---------ANAC58               <-----------GT1
      <---------CCA1(2)             ---------->ID1               --------->ARR14(2)
    --------->TOE1(1)   <------ZmHOX2a(1)--------->HSFB2a(2)     <---------GLK1(2)
---------ALFIN1      <------ZmHOX2a(1)<---------SPL7           --------->ANAC46
 
gaccacatcgtatcttggaacagaggaggaacaagttttgtcgtctgggatttgcattctttctccacgattctccttcctcgtcatttcaaacacagca  19276500
                                                                   --------->ANAC46
                                                               ------>MYB83
                                                         ----------->HVH21
           --------->At4g35610                     --------->ARR14(2) --------->MYB52(1)   <------ZmHOX2a(1)
           <---------At4g35610              --------->ZAT14    ------>MYB46(1)          --------->At4g35610
        <-------TEIL                        <---------ZAT14  <---------MYB59      ---------->DOF2
 
atttctcaagtttcatcagacaactcaatacttatgtgagtcttctctgctctgtattctctgaccaaacacaaaacagagcattcaaagcagaggaatg  19276600
                                                      --------->LBD16
                     <-----------GT1               <---------At5g28300
                --------->AHL20(2)        --------->HSFB2a(2)                       <-----------GT1
                <---------AHL20(2)        <---------HSFB2a(2)                      --------->AHL20(2)
           <---------AHL20(2)            <---------ANAC58                      <---------YAB1  -----
         <----------DOF2<----------DOF2  <---------ANAC58                      <---------AHL20(2)
       <------------------------ANAC81   <---------ANAC46               <-----------GT1       ------
 <---------MYB52(1) <-----------GT1 <-----------RAV1(1)          <---------YAB1--------->AHL20(2)
 
ctctgtttttttcttttatttttttaactttcatttcccttgttgctggaaaattaccgcgaagtattctgaatgttactatataattaacttggtaatg  19276700
                                                                                <---------ZAT18
                                                                                <---------ZAT14
                                                                                --------->ZAT18
                                                                           <---------ANAC58
                                                                           <---------ANAC58
                           ----------->GT1                           <---------MYB52(1)
                        <-----------RAV1(1)                         --------->LBD16
                     --------->ARR14(2)                            <---------ANAC58
                     --------->GLK1(2)                             <---------ANAC58
                     <---------ARR14(2)         --------->HSFC1(2) <---------ANAC55(2)
                    <---------ARR14(2)     --------->HSFC1(1)      <---------ANAC46
                    <---------GLK1(2)      <---------HSFC1(1)   --------->GLK1(2)
 --------->DAG2 <---------At4g35610        --------->HSFB2a(2) <---------GLK1(2)--------->ZAT14
---------->DOF2 --------->At4g35610        <---------HSFB2a(2) <---------ARR14(2)
------>GT1   <---------At5g28300   <-----------GT1    XXXXXXXXXXXXXXXXXXXX>MIR4243<---------ANAC46
----->GT1   <-----------GT1<---------MYB46(3)   <---------HSFC1(2) --------->ANAC55(2)
 
gaaaaaagtcattttttacagcagaatctgttgttaatttagcattctagaaacatcgaaaatgtagattccgtaatggctagtggagtagaagaaggtt  19276800
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AGI:  At3g51910.1   
Description:  AT-HSFA7A (Arabidopsis thaliana heat shock transcription factor A7A); DNA binding / transcription factor. Identical to Heat stress transcription factor A-7a (HSFA7A) [Arabidopsis Thaliana] (GB:Q9SV12); similar to AT-HSFA7B (Arabidopsis thaliana heat shock transcription factor A7B), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G63350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22596.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232)
Range:  from: 19276272    to: 19277597    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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