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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
AtMYB61
--------->
ALFIN1
<---------
DEAR3(1)
<------
NtERF2
--------->
MYB55(2)
<---------
MYB46(3)
--------->
ALFIN1
<---------
AtMYB61
<---------
ANAC46
<------
NtERF2
--------->
ATERF1(1)
<-------
GAMYB
<---------
DEAR3(2)
<---------
DEAR4(2)
--------->
MYB55(2)
<---------
MYB46(3)
<---------
DREB2C(2)
<---------
DEAR3(1)
--------->
ALFIN1
<---------
ANAC46
<---------
AtMYB61
<---------
ABI4(1)
<------
NtERF2
--------->
ATERF1(1)
<---------
RAP2.6(1)
------>
NtERF2
<---------
RRTF1(1)
<---------
ATERF1(1)
<---------
ORA47(2)
<---------
DEAR4(2)
<---------
RAP2.3(1)
<---------
ERF1
<---------
RAP2.3(2)
<---------
RRTF1(2)
<---------
RAP2.3(3)
<---------
RRTF1(3)
--------->
ATERF1(2)
<---------
RAP2.6(2)
<---------
DEAR3(1)
--------->
ANAC58
--------->
DEAR3(1)
<---------
ANAC58
--------->
ANAC58
<---------
At4g35610
<---------
ANAC46
<---------------------
WRI1
<---------
ABI4(1)
<---------
ANAC58
<-----------
HVH21
<---------
LBD16
------->
GAMYB
--------->
DEAR3(1)
---------->
ID1
<---------
ATERF1(2)
--------->
MYB52(1)
<---------
ALFIN1
<---------
ARR11(3)
--------->
ATERF1(1)
---------->
TaMYB80
<
-------->
ARR14(3)
--------->
ARR11(3)
<---------
DEAR3(1)
<---------
KAN4(2)
<-----
-------->
ARR11(3)
--------->
DAG2
<---------
ANAC58
<---------
ATERF1(1)
--------->
ARR14(2)
------
---------
ARR11(3)
---------->
DOF2
<---------
ANAC58
<---------
RAP2.3(1)
<---------
ARR14(2)
<-----
aaggtctccaccgtcgaagcaaataaagcaaacatcttcttccttgtcttccttcttcggcggcggtgggggtggacgaatatgcaacggcgtattagcc
19002600
<
--
<---
<----
-----
------
------
------
---------
---------
=========
------->
GAMYB
--------->
DEAR3(1)
--------->
REM1(1)
--------->
AtMYB61
--------->
At4g35610
--------->
RAP2.6(2)
<---------
AHL20(2)
<-----------
GT1
<------------
AtMYB77
<---------
ATERF1(1)
--------->
ZAT2
<----------
DOF2
<---------
MYB55(2)
--------->
ATERF1(1)
--------->
ATHB12
<---------
ARR11(3)
--------->
ATERF1(1)
---------
ZAT18
<----------
DOF2
<-------
TEIL
--------->
DOF5.7(2)
--------->
MYB46(3)
----
ANAC58
<---------
ATERF1(1)
<---------
At4g35610
--------->
ATHB12
--------->
DEAR3(2)
----->
RAV1(2)
--------->
LBD16
<---------
ZAT2
--------->
TOE1(3)
-------->
P
----
----
ANAC58
--------->
ATERF1(1)
<------
NtERF2
--------->
TOE2(3)
--------->
MYB46(3)
tgtgcccttggaggcctcccccgttttcgttttattggggcagcttcatcaataactttaacctcttgctcattggacat
aggcacagcaaccgccccag
19002700
<------
NtERF2
--------->
REM1(2)
--------->
ALFIN1
------->
GAMYB
--------->
ANAC58
------------
AtMYB77
--------->
ANAC55(2)
------>
P
<-----------
RAV1(2)
--------->
ANAC46
------
MYB55(2)
--------->
ANAC58
-----
ZAT2
----------->
HVH21
---->
ZAT2
--------->
MYB59
--------->
At4g35610
--->
ANAC58
<---------
At4g35610
--->
ANAC46
<-------
TEIL
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--->
ANAC58
<------
MYB46(1)
--------->
GLK1(1)
===============
HOX2a_HOX2a
-->
RAV1(1)
<------
MYB83
<------
ZmHOX2a(1)
<------
ZmHOX2a(2)
<---------
ARR11(3)
--------->
GLK1(1)
>
DEAR3(1)
--------->
MYB111(1)
--------------------->
WRI1
<<<<<<<<<<
WRKY26
--------->
ARR14(2)
--
====================
RAV
=========================
HOX2a_HOX2a
--------->
ARR11(3)
<---------
GLK1(1)
----->
MYB46(3)
========================
HOX2a_HOX2a
--------->
YAB1
------>
ZmHOX2a(1)
<-
caaccgtggaggcaggtacagagagagcaggacttggttaacaccgatctcttcacattgatcaactctcataagatcgattcctctgacggaactctct
19002800
<---------
ANAC58
--------->
ANAC46
--------->
ANAC58
<---------
ANAC58
--------->
ANAC58
--------->
ZAT2
---------->
DOF2
--------->
ANAC58
---------->
DOF2
--------->
ANAC58
------>
MYB46(1)
<---------
ALFIN1
<---------
YAB1
------>
MYB83
--------->
LBD16
<---------
GLK1(2)
--------->
ANAC58
------>
NtERF2
<---------
MYB52(1)
<---
--------->
ANAC58
<-----------
HVH21
<---------
ANAC58
<---------
ICU4
<---
--------->
MYB46(3)
--------->
ANAC46
<---------
ANAC46
--------->
ICU4
<---------
At4g35610
------>
NtERF2
----------------------->
TaNAC69(2)
<-------
GAMYB
--------->
ATHB12
<---------
AHL20(2)
------->
HSFB2a(2)
<---------
LBD16
<---------
ANAC58
<---------
YAB1
----------->
GT1
---------
--------
HSFB2a(2)
<---------
ZAT2
<---------
ZAT2
<-----------
RAV1(1)
--------->
GLK1(2)
--------->
At4g35610
tcgcgaccagccaaagaagccaactccggcacgccttgctggagttgcttctgttgattctccatgattagtgaagaatttgaaaaaattgtgagcagta
19002900
--------->
ICU4
<---------
YAB1
----------->
GT1
<----------
DOF2
--------->
ICU4
<------
ZmHOX2a(2)
<-------
TEIL
--------->
YAB1
--------->
ARR14(2)
<---------
ARR14(2)
<---------
YAB1
<---------
ARR14(2)
--------->
GLK1(2)
--------->
ICU4
--------->
At4g35610
<---------
TOE1(2)
<---------
YAB1
<---------
At4g35610
<---------
TOE2(3)
--------->
YAB1
<---------
YAB1
------
ANAC58
--------->
GLK1(2)
--------->
ICU4
--------->
YAB1
------
ANAC58
--------->
TOE1(3)
--------->
ARR14(2)
--------->
ICU4
<-----
------>
AtSPL3
--------->
TOE2(3)
<---------
ARR14(2)
--------->
YAB1
*
TSS
<-----
cttgcagatcaactagtgaaatagaaaccctaatctgaggttctttggggattttggcgatgatgaatgatgatgatgatggagagaag
tatgggtgatg
19003000
<<<<<<<<<
TBF1
<-----------
GT1
<------------------------
ANAC81
<---------
DAG2
<----------
DOF2
----------->
GT1
<----------
DOF2
<----------
DOF2
---
----
bZIP60(2)
<---------
ZAT6
------->
TEIL
<------------------------
ANAC81
---
----
ANAC46
--------->
ZAT6
--------->
YAB1
<------------------------
ANAC81
<----------
DOF2
tgtttagaaaacgaagactagtgggaagaaaaaatcatatggactttttttttcttcttctattcttttccacttctttagttcttactttgttatgacc
19003100
<---------
At4g35610
--------------->
AGL15
<---------------
AGL15
<-----------------
AGL2
<----------
DOF2
<---------
YAB1
<-----------
GT1
<---------
YAB1
--------->
GLK1(2)
<-----------
HVH21
<---------
AHL20(2)
<---------------
AtSPL8
<------
--->
MYB83
--------->
bZIP60(1)
<---------
GLK1(2)
--------------->
AtSPL8
--------->
YAB1
--->
MYB46(1)
<---------
bZIP60(1)
--------->
HSFB2a(2)
--------->
YAB1
<---------
GLK1(2)
aaatgtataacaaaaatgttgtcacttctttctgcttatagaatttttattatttcaaaaatactagtaccaatttctacagattccaaaaatactataa
19003200
<------
MYB46(1)
<---------
ANAC58
<---------
ANAC58
--------->
ZAT2
<---------
ZAT2
<---------
GLK1(1)
--------->
TOE2(3)
----
--------->
GLK1(1)
--------->
TOE1(3)
-----
<---------
YAB1
<---------
STY1(2)
<----
<---------
TOE1(2)
<------
MYB83
-----
--------->
HSFB2a(2)
<---------
ARR11(3)
--------->
STY1(2)
-----
<---------
HSFB2a(2)
--------->
ARR11(3)
------>
ZmHOX2a(1)
--------->
YAB1
-------
---
YAB1
<-------
TEIL
<---------
TOE2(2)
----------->
GT1
--------->
AHL20(2)
--------->
MYB59
tttctagatttcaaattcatttctaaaatcttatgttagatttcctagcttggttaaaccttcaaatatttatccaaaaataacatttgagttaagtaga
19003300
<---------
ZAT2
<---------
At4g35610
--------->
GLK1(1)
----------->
GT1
<---------
GLK1(1)
<-------
TEIL
-----
----->
CCA1(2)
<--------
P
<----
---->
ARR14(2)
<------
MYB46(1)
<----
-----
ARR14(2)
<------
MYB83
--------->
TOE2(3)
<-----------------
AGL3
--------->
CCA1(2)
---->
ARR11(3)
--------->
MYB46(2)
<---------
ETT(2)
--------->
AHL20(1)
---->
ARR11(1)
--------->
MYB59
<---------
AHL20(2)
--------->
ETT(2)
--------->
ARR11(3)
---->
ARR10
--------->
MYB111(1)
--------->
TOE2(2)
<---------
ANAC46
--------->
AHL20(2)
tatggaattccagcttattaggtagatagttattttcttaaaaaaacataggtagacatctatttgtggtgtccaatttagcaaaatatatggagcattt
19003400
--------
---------
---------
<--------
---------
---------
--------->
AHL20(2)
------>
MYB46(1)
<---------
TOE2(3)
------>
MYB83
--------->
AHL20(2)
--------->
YAB1
--------->
TOE1(2)
<---------
YAB1
<-----------
GT1
--------->
TOE2(2)
<---------
AHL20(1)
----------->
GT1
--------->
AHL20(2)
<-----------
ARR10
--------->
AHL20(1)
--------->
ANAC55(2)
<---------
AHL20(2)
--------->
GLK1(2)
--------->
AHL20(2)
<---------
ANAC55(2)
--------->
TOE2(3)
--------->
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
<---------
ANAC55(2)
<---------
ARR11(3)
---->
AHL20(2)
<---------
ARR11(3)
--------->
MYB52(1)
--------->
RVE1(1)
-----
AHL20(2)
--------->
YAB1
<-------
TEIL
----------->
GT1
<---------
AHL20(2)
-----
AHL20(1)
<---------
YAB1
--------->
YAB1
<---------
TOE2(3)
--------->
AHL20(2)
tattttattatttaagaaaatatgatattatgtaatatacaatgttcatatacaataacgtaaaatttatcaacatcatttaaaaatcttacctacgtaa
19003500
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AGI:
At3g51120.1
Description:
zinc finger (CCCH-type) family protein. similar to PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G18090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47242.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Plus-3 (InterPro:IPR004343); contains InterPro domain GYF (InterPro:IPR003169); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (In
Range:
from: 18996880
to: 19002989
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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