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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                    <---------AtMYB61
                                                                    --------->ALFIN1
                                                                 <---------DEAR3(1)
                                                                <------NtERF2
                                                               --------->MYB55(2)
                                                               <---------MYB46(3)
                                                              --------->ALFIN1
                                                              <---------AtMYB61
                                                              <---------ANAC46
                                                             <------NtERF2
                                                             --------->ATERF1(1)
                                                             <-------GAMYB
                                                            <---------DEAR3(2)
                                                            <---------DEAR4(2)
                                                            --------->MYB55(2)
                                                            <---------MYB46(3)
                                                           <---------DREB2C(2)
                                                           <---------DEAR3(1)
                                                           --------->ALFIN1
                                                           <---------ANAC46
                                                           <---------AtMYB61
                                                          <---------ABI4(1)
                                                          <------NtERF2
                                                          --------->ATERF1(1)
                                                         <---------RAP2.6(1)
                                                         ------>NtERF2
                                                         <---------RRTF1(1)
                                                         <---------ATERF1(1)
                                                         <---------ORA47(2)
                                                         <---------DEAR4(2)
                                                         <---------RAP2.3(1)
                                                         <---------ERF1
                                                        <---------RAP2.3(2)
                                                        <---------RRTF1(2)
                                                        <---------RAP2.3(3)
                                                        <---------RRTF1(3)
                                                        --------->ATERF1(2)
                                                        <---------RAP2.6(2)
                                                        <---------DEAR3(1)
             --------->ANAC58                           --------->DEAR3(1)            <---------ANAC58
             --------->ANAC58                          <---------At4g35610            <---------ANAC46
         <---------------------WRI1                    <---------ABI4(1)              <---------ANAC58
        <-----------HVH21                              <---------LBD16              ------->GAMYB
       --------->DEAR3(1)                 ---------->ID1<---------ATERF1(2)      --------->MYB52(1)
    <---------ALFIN1         <---------ARR11(3)        --------->ATERF1(1) ---------->TaMYB80      <
-------->ARR14(3)            --------->ARR11(3)      <---------DEAR3(1)    <---------KAN4(2)  <-----
-------->ARR11(3)    --------->DAG2   <---------ANAC58<---------ATERF1(1)  --------->ARR14(2) ------
---------ARR11(3)   ---------->DOF2   <---------ANAC58<---------RAP2.3(1)  <---------ARR14(2) <-----
 
aaggtctccaccgtcgaagcaaataaagcaaacatcttcttccttgtcttccttcttcggcggcggtgggggtggacgaatatgcaacggcgtattagcc  19002600
                                                                                                   <
                                                                                                  --
                                                                                                <---
                                                                                               <----
                                                                                               -----
                                                                                              ------
                                                                                              ------
                                                                                              ------
                                                                                           ---------
                                                                                           ---------
                                                                                           =========
                                                                                        ------->GAMYB
                                                                                        --------->DEAR3(1)
                                          --------->REM1(1)                             --------->AtMYB61
                                      --------->At4g35610                               --------->RAP2.6(2)
                           <---------AHL20(2)          <-----------GT1                 <------------AtMYB77
         <---------ATERF1(1)          --------->ZAT2<----------DOF2                    <---------MYB55(2)
         --------->ATERF1(1)--------->ATHB12     <---------ARR11(3)                    --------->ATERF1(1)
---------ZAT18            <----------DOF2<-------TEIL--------->DOF5.7(2)               --------->MYB46(3)
----ANAC58  <---------ATERF1(1)       <---------At4g35610         --------->ATHB12     --------->DEAR3(2)
----->RAV1(2)   --------->LBD16       <---------ZAT2--------->TOE1(3)                 -------->P----
----ANAC58--------->ATERF1(1)         <------NtERF2 --------->TOE2(3)               --------->MYB46(3)
 
tgtgcccttggaggcctcccccgttttcgttttattggggcagcttcatcaataactttaacctcttgctcattggacataggcacagcaaccgccccag  19002700
       <------NtERF2
   --------->REM1(2)
  --------->ALFIN1
------->GAMYB                                                                        --------->ANAC58
------------AtMYB77                                                                  --------->ANAC55(2)
------>P<-----------RAV1(2)                                                          --------->ANAC46
------MYB55(2)                                                                       --------->ANAC58
-----ZAT2                                                                         ----------->HVH21
---->ZAT2--------->MYB59                                                        --------->At4g35610
--->ANAC58                                                                      <---------At4g35610
--->ANAC46   <-------TEIL                   ------>ZmHOX2a(2)           <------ZmHOX2a(2)
--->ANAC58<------MYB46(1)                  --------->GLK1(1)            ===============HOX2a_HOX2a
-->RAV1(1)<------MYB83    <------ZmHOX2a(1)<------ZmHOX2a(2)           <---------ARR11(3)--------->GLK1(1)
>DEAR3(1)--------->MYB111(1) --------------------->WRI1  <<<<<<<<<<WRKY26   --------->ARR14(2)    --
====================RAV   =========================HOX2a_HOX2a         --------->ARR11(3)<---------GLK1(1)
----->MYB46(3)            ========================HOX2a_HOX2a    --------->YAB1 ------>ZmHOX2a(1) <-
 
caaccgtggaggcaggtacagagagagcaggacttggttaacaccgatctcttcacattgatcaactctcataagatcgattcctctgacggaactctct  19002800
                                  <---------ANAC58
                           --------->ANAC46
             --------->ANAC58     <---------ANAC58
             --------->ANAC58    --------->ZAT2
           ---------->DOF2 --------->ANAC58
        ---------->DOF2    --------->ANAC58
     ------>MYB46(1)     <---------ALFIN1                      <---------YAB1
     ------>MYB83      --------->LBD16              <---------GLK1(2)
    --------->ANAC58   ------>NtERF2             <---------MYB52(1)                             <---
    --------->ANAC58   <-----------HVH21   <---------ANAC58  <---------ICU4                     <---
   --------->MYB46(3) --------->ANAC46     <---------ANAC46 --------->ICU4                <---------At4g35610
 ------>NtERF2----------------------->TaNAC69(2)<-------GAMYB--------->ATHB12    <---------AHL20(2)
------->HSFB2a(2)    <---------LBD16       <---------ANAC58 <---------YAB1  ----------->GT1---------
--------HSFB2a(2) <---------ZAT2 <---------ZAT2<-----------RAV1(1)       --------->GLK1(2)--------->At4g35610
 
tcgcgaccagccaaagaagccaactccggcacgccttgctggagttgcttctgttgattctccatgattagtgaagaatttgaaaaaattgtgagcagta  19002900
                                                                        --------->ICU4
                                                                     <---------YAB1
          ----------->GT1              <----------DOF2               --------->ICU4
    <------ZmHOX2a(2)                <-------TEIL                  --------->YAB1
   --------->ARR14(2)               <---------ARR14(2)            <---------YAB1
   <---------ARR14(2)               --------->GLK1(2)          --------->ICU4
  --------->At4g35610            <---------TOE1(2)         <---------YAB1
  <---------At4g35610            <---------TOE2(3)       --------->YAB1 <---------YAB1
------ANAC58                --------->GLK1(2)           --------->ICU4--------->YAB1
------ANAC58            --------->TOE1(3)     --------->ARR14(2)  --------->ICU4              <-----
------>AtSPL3           --------->TOE2(3)     <---------ARR14(2)--------->YAB1          *TSS  <-----
 
cttgcagatcaactagtgaaatagaaaccctaatctgaggttctttggggattttggcgatgatgaatgatgatgatgatggagagaagtatgggtgatg  19003000
                                                   <<<<<<<<<TBF1
                                               <-----------GT1
                                           <------------------------ANAC81
                                        <---------DAG2                  <----------DOF2
                      ----------->GT1   <----------DOF2      <----------DOF2                     ---
----bZIP60(2)    <---------ZAT6       ------->TEIL <------------------------ANAC81               ---
----ANAC46 --------->ZAT6      --------->YAB1 <------------------------ANAC81       <----------DOF2
 
tgtttagaaaacgaagactagtgggaagaaaaaatcatatggactttttttttcttcttctattcttttccacttctttagttcttactttgttatgacc  19003100
                             <---------At4g35610
                            --------------->AGL15
                            <---------------AGL15
                           <-----------------AGL2
                        <----------DOF2      <---------YAB1
                  <-----------GT1         <---------YAB1                       --------->GLK1(2)
                <-----------HVH21         <---------AHL20(2)<---------------AtSPL8           <------
--->MYB83      --------->bZIP60(1)   <---------GLK1(2)      --------------->AtSPL8    --------->YAB1
--->MYB46(1)   <---------bZIP60(1)--------->HSFB2a(2)  --------->YAB1         <---------GLK1(2)
 
aaatgtataacaaaaatgttgtcacttctttctgcttatagaatttttattatttcaaaaatactagtaccaatttctacagattccaaaaatactataa  19003200
                                               <------MYB46(1)
                                            <---------ANAC58
                                            <---------ANAC58
                                           --------->ZAT2
                                           <---------ZAT2
                                    <---------GLK1(1)  --------->TOE2(3)                        ----
                                    --------->GLK1(1)  --------->TOE1(3)                       -----
                             <---------YAB1<---------STY1(2)                                   <----
                            <---------TOE1(2)  <------MYB83                                    -----
--------->HSFB2a(2)    <---------ARR11(3)  --------->STY1(2)                                   -----
<---------HSFB2a(2)    --------->ARR11(3)------>ZmHOX2a(1)                --------->YAB1     -------
---YAB1     <-------TEIL    <---------TOE2(2)  ----------->GT1--------->AHL20(2)         --------->MYB59
 
tttctagatttcaaattcatttctaaaatcttatgttagatttcctagcttggttaaaccttcaaatatttatccaaaaataacatttgagttaagtaga  19003300
        <---------ZAT2
        <---------At4g35610
  --------->GLK1(1)    ----------->GT1
  <---------GLK1(1)<-------TEIL                                                                -----
----->CCA1(2)     <--------P                                                                   <----
---->ARR14(2)   <------MYB46(1)                                                                <----
-----ARR14(2)   <------MYB83    --------->TOE2(3)      <-----------------AGL3       --------->CCA1(2)
---->ARR11(3)  --------->MYB46(2)                <---------ETT(2)                  --------->AHL20(1)
---->ARR11(1)  --------->MYB59<---------AHL20(2) --------->ETT(2)                  --------->ARR11(3)
---->ARR10     --------->MYB111(1)         --------->TOE2(2)     <---------ANAC46 --------->AHL20(2)
 
tatggaattccagcttattaggtagatagttattttcttaaaaaaacataggtagacatctatttgtggtgtccaatttagcaaaatatatggagcattt  19003400
                                                                                            --------
                                                                                           ---------
                                                                                           ---------
                                                                                           <--------
                                                                                           ---------
                                                                                           ---------
            --------->AHL20(2)                                                            ------>MYB46(1)
          <---------TOE2(3)                                                               ------>MYB83
    --------->AHL20(2)                                            --------->YAB1        --------->TOE1(2)
   <---------YAB1                                               <-----------GT1         --------->TOE2(2)
<---------AHL20(1)        ----------->GT1                     --------->AHL20(2) <-----------ARR10
--------->AHL20(1)        --------->ANAC55(2)                 <---------AHL20(2) --------->GLK1(2)
--------->AHL20(2)        <---------ANAC55(2)          --------->TOE2(3)         --------->ARR11(3)
<---------AHL20(2)  --------->ARR11(3)                <---------ANAC55(2)        <---------ARR11(3)
---->AHL20(2)       <---------ARR11(3)              --------->MYB52(1)          --------->RVE1(1)
-----AHL20(2)      --------->YAB1        <-------TEIL ----------->GT1       <---------AHL20(2)
-----AHL20(1)     <---------YAB1       --------->YAB1<---------TOE2(3)      --------->AHL20(2)
 
tattttattatttaagaaaatatgatattatgtaatatacaatgttcatatacaataacgtaaaatttatcaacatcatttaaaaatcttacctacgtaa  19003500
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AGI:  At3g51120.1   
Description:  zinc finger (CCCH-type) family protein. similar to PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G18090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47242.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Plus-3 (InterPro:IPR004343); contains InterPro domain GYF (InterPro:IPR003169); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (In
Range:  from: 18996880    to: 19002989    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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