Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------ANAC58                                                                   --------->LBD16                                                                   ------>NtERF2                  >>>                                                                  --------->ANAC58                <--                                                                  --------->ANAC58                <--                                                                  --------->ANAC46 <---------ANAC58 -                                                                 <---------LBD16   <---------ANAC58 <                                                               <---------ARR14(2)  --------->ALFIN1--                                                          <---------ANAC46     <---------ANAC46 <----                                                      <---------HSFC1(2)       <---------ANAC58------       --------->TOE2(3)                              <---------HSFB2a(1)<---------AHL20(2) ---------       --------->TOE1(3)             *TSS             --------->HSFC1(2)--------->AHL20(2)XXXXXXXXXXX    --------->GLK1(1)<---------TOE2(3)      ----------->TGA1   --------->ARR14(2)--------->ALFIN1----   gcagagaaaccctaatttcaattgaggtcgaattgttgttgttgtgatgacgaagaagcgtcgtagttccgccattaaatggagtgtgtgtgagtgagtg  17300000       <-----------GT1 >>>>>>>E2Fa -------ANAC46 -------PCF2 ----------->CBF ------NtERF2 ---->NtERF2  <---------ALFIN1                                                                     -- -----ATERF1(1)                                                                                   <-- --->ALFIN1  --------->MYB46(3)                                                                ------ >ATHB12   --------->ANAC46                                                                    ------ XXXXXXXXX>MIR171A                                <----------DOF2                              <----- ----->RAP2.3(1)--------->ANAC46--------->HSFB2a(2)    <-----------GT1      ------>NtERF2     -------   gcgccaatatttccctccaccctaaaaaaaacttctaaaattctaagttgggctttttaactatttcatgtagttctcggcccattagacccaaaatttt  17300100         --------->AHL20(2) <---------HSFB2a(2) ------->YAB1 -------YAB1 --->AHL20(1)                  --------->ZAT14 --->AHL20(2)                  <---------ZAT14                                            <---------At4g35610 ----AHL20(2)          --------->AHL20(2)                    <----------DOF2  <---------ANAC58     <- -->AHL20(2)           <---------AHL20(2)              <---------YAB1         <---------ANAC58  <----   attatagaagaataaatatggacatttaaattcttcactgatacaatttggcattttttgattctttgggatttgtattgtcttgttttctctgctaatt  17300200                                             --------->GLK1(2)                      <-------TEIL          <---------ARR14(2)                  <---------ARR11(3)        --------->ARR14(2)                  --------->AHL20(1)        <---------GLK1(2)                  <---------AHL20(1)   --------->ANAC46                ------------>CBF          ---- --------YAB1     --------->ARR11(3)   --------->ANAC58   --------->AHL20(2)     <---------AHL20(2) -----AHL20(2) --------->AHL20(2)      --------->ANAC58   <---------AHL20(2)    --------->AHL20(2)   tatgattctaaattctaaaaaatattcatccattctaaaactcgcaaattctgagcatatttaaatgggcttagccaattcatttaatcggcccattagc  17300300                                               ------>ZmHOX2a(2)                              <------                                             <---------ARR11(3)                               -------                       --------->At4g35610   --------->ARR11(3)                               <------              ------------>CBF           <------------CBF                                     <------              ------>ZmHOX2a(1)         --------->ATHB12                                      <------       --------->ARR11(3)              <---------YAB1               <---------YAB1    --------->TOE2(3)       <---------ARR11(3)             <----------DOF2            <---------AHL20(2)   --------->TOE1(3) -------->CBF--------->TOE2(3)    <---------GLK1(2)   *TSS     ------->TEIL   ------>ZmHOX2a(1)   ccaattcaagttcttcctcaatagcagaagaaaatggaatctttattgatcttagggtttatatgaatttatgattcttcctcttaaaccctaatttcgt  17300400                    --------->YAB1                   <---------ATHB12                                                       --------->AHL20(2)        ------>ZmHOX2a(1)<---------At4g35610                                              <---------AHL20(2)  <-----------GT1 --------->ARR14(2)                                                <---------ANAC58 ---ANAC58        <---------ARR14(2)                                                <---------ANAC58 -->ANAC55(2)--------->ANAC58                                                       ----------->GT1<- ---ANAC55(2)--------->ANAC46                                                       <---------ANAC55(2) ---ANAC46   --------->ANAC58                        --------->AtLEC2               --------->ANAC55(2) ---ANAC58  ------>ZmHOX2a(1)  ------>ZmHOX2a(1)   <---------AtLEC2                 <---------ANAC46   attcttactccttcctcgccaatcttcatcttcctcatgttttctctaattctccatggaagaaagtctgtggaattacagaaatggcgtaatttaagag  17300500                                                                                  <---------------AtSPL8                                                                                  --------------->AtSPL8                                       ------>MYB83                 <-------TEIL  <---------------AtSPL3                                       ------>MYB46(1)             --------->CCA1(2)                                     <---------MYB111(1)           --------->ARR14(1)                                 --------->MYB46(3)               <---------ARR14(2)                               <-----------GT1                    <---------GLK1(2)                            <----------DOF2                       --------->ARR14(2)                       <---------GLK1(1) <---------ATHB12         --------->ARR11(1)    <----------DOF2    <---------ZAT18   ------->TEIL   --------->AtMYB61        ---------->DOF2     --------------->AtSPL3 --------At5g28300  <-------TEIL<---------At5g28300 --------->HSFB2a(2)     ---------->DOF2   ttacagtgagcattgtgcaaaatgcatttccttttaccaccaaatcgttctcttctacaatagctaaagattcgagtccaaagggaagtactttcacagt  17300600                                                                                       --------->GLK1(2)                                                                                      --------->ARR14(2)                   <---------ANAC58                                                   <---------ARR14(2)              --------->ATHB12                                                        <---------GLK1(2)              <---------ICU4                           ---------->DOF2          <---------ARR14(2)              -------->ATHB1                       ---------->DOF2             --------->GLK1(1)  ---             <---------ATHB12                   --------->TOE2(3)             >>>>>>>>>GT-1       <--          ------------>ATHB5          --------->HSFB2a(2)                   --------->At5g28300   --- <---------CCA1(2) <---------ANAC58   <---------HSFB2a(2)                  ----------->GT1       <---   ctcttatctcgttgaatcattgggtttgactaaaaaacttgcagaaacaatctcaaagaaagtcaccttcgaagacaaggtaaatccagattctgttctg  17300700                                          --------->ARR11(3)                                         --------->YAB1                                         <------ZmHOX2a(1)                                   <---------ARR11(3)                                   --------->ARR11(3)                                  <---------RVE1(1)                                  --------->GLK1(1)                                  <---------GLK1(1)      --------->TOE1(2)                                 --------->ARR11(3)    -------->P <---------ANAC46                          --------->GLK1(2)          <---------SPL7                         <---------GLK1(2)<---------ARR11(3)      <---------ANAC58                         --------->ARR11(3)         <---------ANAC58 ---->TEIL               <---------ARR11(3)    <---------ICU4     <---------ANAC58   --------->GLK1(1) -------ARR14(2)         <---------ARR14(2) --------->YAB1--------->ANAC46           <---------GLK1(1) ------>ARR14(2)         --------->ARR14(2)<------ZmHOX2a(2) --------->ATHB12 --------->At4g35610 ------CCA1(2)  ----------->GT1  <---------ARR11(3) <---------ANAC58        <---------GLK1(2)     ---   aatcttcttagaagtaatgggtttaaagattctcagatatctaggatcataagggcttacccacgattgcttgtaacagatgctgagaaatctcttcgtc  17300800                                                                       --------->GLK1(2)                                                                     --------->MYB46(3)                                                              --------->KAN4(2)                                                             <---------KAN4(1)                                                             <---------HSFB2a(1)              -------                                                             --------->HSFB2a(1)              <------                                                             <---------HSFC1(2)               -------                                        <---------bZIP60(1)  --------->KAN4(1)               <-------                          --------->At4g35610                --------->HSFC1(2)       ----------->GT1                        <------ZmHOX2a(1)<-----------HVH21  <---------KAN4(2)        --------->DAG2 ------->DOF2---------->DOF2            --------->bZIP60(1) <---------TOE1(2)      ---------->DOF2 <-   caaagcttcagtttttaaagtctagaggagcttcaagctctgaggtcatagagattgtttcgaatgttccaacaatcttggataagaaaggtgaagaatc  17300900  Previous    Next  AGI:  At3g46940.1    Description:  deoxyuridine 5'-triphosphate nucleotidohydrolase family. similar to unnamed protein product [Vitis vinifera] (GB:CAO61170.1); contains InterPro domain DeoxyUTP pyrophosphatase subfamily 1; (InterPro:IPR008181); contains InterPro domain DeoxyUTP pyrophosphatase; (InterPro:IPR008180); contains InterPro domain dCTP Deaminase; (InterPro:IPR003232) Range:  from: 17299179    to: 17299937    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g46950.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT1G61960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40592.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 17300354    to: 17301948    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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