Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                              --------->ANAC46                             <---------WOX13(1)                                              <---------ANAC55(2)                          <---------                                              --------->ANAC55(2)                         <---------ANAC58                                        --------->ICU4                                    <---------AtLEC2                               --------->YAB1<---------LBD16                              <---------ANAC58                              <---------ATHB12--------->ANAC58                   --------->ANAC58 ------>GLK1(2)             --------->WOX13(1)--------->ANAC58                   --------->ANAC58 >DOF2                    <------ZmHOX2a(2) --------->MYB52(1)  ------->TEIL ------->TEIL <----------   aagctcgaggggataagagcattgttagatcaatcagagggaaagattacggaagaattgaaaatgaaacttgaagatgaatcaagaaacttgcttgaca  10329300         --------->ICU4       <---------At4g35610    ========================HOX2a_HOX2a    <------ZmHOX2a(1)  --------->ANAC58                                                                               ----  --------->ANAC58       --------------------->WRI1                                   <------MYB83 <- -->HVH21<---------YAB1------>ZmHOX2a(1)                        <----------DOF2       <------MYB46(1) ------AGL15         ------>ZmHOX2a(2)                  <---------TOE2(3)    <------ZmHOX2a(1)   ---- -------AG  <---------YAB1      <---------YAB1        ---------->DOF2<---------At4g35610 <-----------HVH21   aggtaaggaagatgattatttgatcctcttagttagtattgtttttaatattagtttaaaggaagacttttagctcttaggagacgataggtgtcaaaac  10329400                                                 <---------AHL20(2)                                           <---------O2                                           <---------ANAC55(2)                                           <---------ANAC55(1)                                           --------->ANAC55(2)                                           <---------ANAC46                         <----------DOF2                                           <---------ANAC58                        --------->TOE2(3)                                           <---------ANAC58                  ------>ZmHOX2a(2)                                           ----------->GT1                   --------------->AtSPL8                                ---------->DOF2  --------->AHL20(2)         --------->At4g35610                  <---------At4g35610     <-----------------------TaNAC69(2)<---------At4g35610 ----->TOE2(2)    <---------ZAT14        <-----------GT1              <----------DOF2 ----------HVH21  <---------ZAT18   <---------ANAC58        <<<<<<<<<<<<<<<<<LFY ------->TEIL  ------ ----->TOE1(2)    --------->ZAT14   <---------ANAC58        >>>>>>>>>>>>>>>>>LFY <-----------------AGL1   ctgtgagtgagactattttgtgcagacaaaacacaaaagcttgtaacgtgataaatttcaaggcccaatgggcttttgatctgaacctttatggaatagc  10329500                       <------NtERF2                      <---------RAP2.3(1)                     <---------DEAR4(1)                     <---------DREB2C(2)                     <---------RAP2.3(3)                     <---------At1g77200                     <---------DEAR3(1)              ----------->GT1   <-------GAMYB                     --------->ETT(1)                --------->LBD16  ----------->GT1                    --------->RAP2.6(3)            <---------LBD16<---------TOE2(1)         ---------    <-----------GT1<-----------HVH21   ---------->DOF2            <---------TOE1(1)      <----------DOF2 --->At4g35610    <-----------RAV1(1)--------->TOE2(3)--------->At5g28300     <----------DOF2   tggatttttctgtttttctcttgtcggcgagaatataaacctaaagagggtaacccggtaaaatgagtccgagggttacactttaatgggcctttaataa  10329600                                                                                              <------                                                                                            ------>NtERF2                                                                                            <--------                                                                                           --------->RAP2.3(2)                       <-------TEIL                                                       --------->RAP2.3(1)                   --------------->AtSPL8                                                <---------ATERF1(1)                   --------------->AtSPL3                                                --------->LBD16                  --------->MYB52(1)                                                     ------>NtERF2                 <-----------GT1              <---------ICU4                            --------->DEAR3(1)             --------->AHL20(2)       <----------DOF2                                   --------->ANAC46     --------->ANAC55(2)            ---------->ID1                        ------>ZmHOX2a(1)--------->DEAR3(1)     <---------ANAC55(2)    <---------GLK1(2)<---------YAB1      --------->TOE1(3)     <---------LBD16 >YAB1  --------->GLK1(2) <---------YAB1   --------->YAB1        --------->TOE2(3)<----------DOF2   gcccattaagtatctataaataccgtacatgattcttcgtctttttcatcattcactgaaacaaaaaccctaattcctatgcttctttctccgccgcttc  10329700                                                 --------->YAB1                                               *TSS   <---------YAB1                                 --------->GLK1(1) <---------YAB1                                 <---------GLK1(1) --------->ICU4       <---------ALFIN1                               <------ZmHOX2a(1)--------->ICU4       ----------->HVH21                             --------->MYB59  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->AHL20(2)    xxxxxxxxxxxxxxxx>smallRNA(i) ----DOF2           <---------ANAC58          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        --------->ARR11(3) -At4g35610         <---------ANAC58          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <---------ARR11(3)   tctgtttttggctaattagatttcgttttattaggaactctgttttggcgatgatgatcaatgcttaatttctgacacctcttgtatgagaagagcttga  10329800                                                                                  <---------TOE2(3)                                                                                  <---------TOE1(3)                                                       ---------->DOF2    ------>ZmHOX2a(2)         >                                                <---------AHL20(2)       <---------At4g35610        >                                            <--------ATHB1               --------->At4g35610       --            <---------At4g35610             --------->YAB1              <---------ARR14(2)         --            <---------ZAT18                <---------ATHB12             <---------AGP1            <--       <----------DOF2                     --------->ICU4               --------->ARR14(2)        ---   taacctcttctttgagcacattatgcaatactctgagccttaccaatgatttttttacaaagacaagttttttggatctgaattagggtttaagagtgct  10329900      ---------->DOF2 >>>>>>>>ARR2              --------->ANAC58 >>>>>>>>ARR1              --------->ANAC58                               --------->ANAC58 ------->YAB1            ---------->DOF2---------->DOF2                   --------->ANAC58 ------->ATHB12   --------->TOE2(1) <---------ANAC58                   --------->ZAT18          <---- -------YAB1      --------->TOE1(1) <---------ANAC46                   <---------ZAT18   <----------- ------>ICU4     ------>ZmHOX2a(1)  <---------ANAC58                   --------->ZAT14   <-----------   atgattgtaaaagtaattcctcgtactgaaagccaatggcttgaaagactcacattactacccatagaatatgagcactcactcttctaaatccagtttt  10330000                             <----------DOF2                            <---------ANAC58                          <----------DOF2    ---------->ID1          <---------ANAC58                        ---------->ID1  <-----------RAV1(1)       <---------ANAC46                    <----------DOF2 -----AtMYB61            <---------RAP2.6(2)                    <---------MYB52(1) ------AG              --------->ALFIN1 <------------------------ANAC81 ------AGL2       ---------->DOF2    <----------DOF2        ---------->ID1                     <-----   ggttttgttgtttagcattgcaaagttgtggctttaattctttggttttgttttttagcattgtccctttgtcttttaagagccatgttttgaattgttg  10330100                                               --------->ATHB12               <-----------RAV1(1)                                               <---------ICU4           --------->AHL20(2)                --------->WRKY38(1)           <---------YAB1     <---------ANAC58               <---------MYB52(1)             --------->ICU4     <---------ANAC58              <-------GAMYB              --------->YAB1     <---------ZAT6<---------YAB1           <-             <---------ANAC58        <---------AtLEC2 --------->ATHB12 <---------YAB1              --             <---------ANAC58     ---------->ID1 <---------YAB1  <---------ANAC46   <---------MYB46(3) ----MYB46(3)<---------ANAC46   <-----------RAV1(1)  --------->ICU4<---------MYB52(1)         -------   ttgatagaattagtttcgttgagcaatgcccattttgttgcattgatagtgattactgattagtgtttcgtttattatttatggtgttgttgtatgtgta  10330200  Previous    Next  AGI:  At3g27860.1    Description:  PWWP domain-containing protein. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G40340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14756.1); contains InterPro domain PWWP (InterPro:IPR000313) Range:  from: 10327365    to: 10329323    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g27865.1    Description:  snoRNA. snoRNA Range:  from: 10329747    to: 10329838    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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