Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                 <---                                                                                              -------                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(3)                                                                     <---------AHL20(2)   --------->ARR14(2)                                          <---------DAG2            <---------ARR11(3)    <----------                   <---------DAG2         <----------DOF2           --------->ARR11(3)    <---------ARR14(3)           ----------->GT1       <---------AHL20(2)                 <---------AHL20(1)    --------->GLK1(2)       --------->ZAT18          <---------YAB1          <---------ANAC46                  <---------ARR11(3)       --------->ZAT14       <---------AHL20(2)   --------->YAB1 <------ZmHOX2a(1)       <------ZmHOX2a(1)       <---------ZAT14      <---------AHL20(1)    <--------ATHB1 =================================HOX2a_HOX2a     <---------------AtSPL8 --------->ARR11(3)   --------->ICU4 ----------->GT1         <---------HSFC1(2)    <---------ANAC55(1)     <---------ARR11(3)   <---------ATHB12==================================HOX2a_HOX2a    <---------ANAC46<----------DOF2 <-----------RAV1(1) <---------ANAC58                --------->HSFC1(2)   <-----------------------TaNAC69(2) ---------->ID1    <---------ANAC58   ----------->GT1--------->ARR11(3)   acaattaagtgtacagaaaaaccttttggatatatttattgtcgcttttcaatgattttcgtgaaaaggatatatttgtgtaaaataagaaggatcttga  8078400                                                                                 <---------ARR11(3)                                                                                 --------->ARR14(3)                                                                                 <---------ARR14(3)                                                --------->ANAC58   --------->ANAC58                                    --------->YAB1             --------->YAB1    --------->GLK1(2) ----------->GT1                   <---------ATHB12           <---------YAB1     --------->ARR11(3) --------->GT1                    ------>MYB83  --------->ANAC58   --------->ANAC46             <---- ------ANAC46                     ------>MYB46(1)   --------->ZAT6 --------->ANAC58             <---- ---->HVH21         --------->TOE2(3) --------->At4g35610 <----------DOF2        <-----------ARR10 -ARR10    --------->AtLEC2      --------->WOX13(1) <---------ALFIN1     --------->AHL20(2)     <----   cgggtgtaaaaacatgcacaattcttaatttagaccaatcagaagacaacacgaacacttctttattataagctattaaacaaaatcttgcctattttgc  8078500                                                    <----------DOF2                                                   <---------ANAC58                                                   <---------ANAC58                                               --------->GLK1(1)                                           <---------TOE1(2)                                          <---------LBD16                                      <---------ARR11(3)                                      --------->ARR11(3)    --------->AHL20(2)               --------->RVE1(1)    --------->YAB1                   --------->CCA1(1)       ----------->HVH21 --------->YAB1                ----------->GT1 <---------GLK1(1) -----ANAC58                  --------->ALFIN1--------->ARR14(2)                              ------- -----ANAC46                  ----------->GT1 <---------ARR14(2)                         ----------->RAV1(1) -----ANAC58                <---------ANAC46 <------ZmHOX2a(1)                          --------->MYB46(3)   ttagaataatatgaagagtgactcatcagggagtggaaaatatctcaggatttgcttttagctctaacatgtcaaactatctagatgccaacaacacaaa  8078600                                                                    <---------AHL20(2)                                                               <---------AHL20(1)                                                               --------->AHL20(1)                                                               <---------AHL20(2)                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                            --------->AHL20(1)                                                      ----------->GT1    --------->AHL20(2)                                                     ----------->GT1--------->AHL20(2)               <---------YAB1       <---------YAB1 --------->DAG2<---------AHL20(1)       <----------DOF2      --------->YAB1        ---------->DOF2<---------ARR11(3)   <---------GLK1(2)     --------->YAB1        <---------AHL20(2)--------->AHL20(1) --->DOF2--------->AHL20(2) --------->AHL20(2) --------->AHL20(2)--------->ARR11(3)---------->DOF2---   gtgcaaattcttttaatatgaaaacaacaataatatttctaatagaaaattaaaaagggaaataaaatatttttttaaaatatacaaaagaagaaggaat  8078700                           <---------YAB1                          <---------AHL20(1)                          --------->AHL20(2)                          <---------AHL20(2)                          --------->AHL20(1)        <---------CCA1(2)                          <-----     ---------->DOF2--------->YAB1              <---------ANAC58                 --------->ARR14(2)   <---------YAB1   ----------->GT1             <---------ANAC58                ------>ZmHOX2a(1) --------->YAB1--------->AHL20(2)           <---------ANAC58                    <---------CCA1(2) ------>WOX13(1)<---------AHL20(2)          <---------ANAC58             <---------CCA1(2)  ---------   ccatcatcaaagttttataaaattgtaatataatacaaacttgtttgcttccttgtctctccctctgtctctctcatctctcctatcttctccatatata  8078800                                                                                              <------                                                                                              <------                              <---------ARR11(3)                                             <-------                        --------->ANAC46                                                     <-------                      --------->ANAC58                                                       --------                      --------->ANAC46    --------->ARR14(2)                                 --------            --------->ANAC46  --------->ARR11(3)  <---------ARR14(2)                 ------>ZmHOX2a(1)          --------->ANAC58   --------->RVE1(1)    --------->ARR14(2)             --------->ANAC46   <---------ICU4     --------->ANAC58    <---------ARR14(2)                     <---------ALFIN1 ------GT1--------->ANAC46   --------->CCA1(1)<---------------------WRI1       <---------ALFIN1    <- >ARR14(2)--------->ANAC58 *TSS          <---------CCA1(2)           ------>ZmHOX2a(1)      ---------   cttcatcttcacacccaaaactccacacaaaatatctctccctctatctgcaaattttccaaagttgcatcctttcaatttccactcctctctaatataa  8078900                                                                                                   --                                                                            --------->AHL20(2)     <- ---AHL20(2)                                                           <---------AHL20(2)   ------>ZmHOX2a(1) ---YAB1                                                      --------->ARR11(3)          ------>ZmHOX2a(2) --AHL20(2)                                                   --------->GLK1(2)           =========== --AHL20(1)                             <---------ICU4        <---------ARR11(3)         <------ZmHOX2a(2) ->AHL20(1)                             --------->ATHB51     --------->RVE1(1)          ------->TEIL ->AHL20(2)                             --------->AHL20(2)   --------->CCA1(1)          <---------ARR14(2) ----------GT1             <---------AHL20(2)      ----------->RAV1(1) --------->AHL20(2)============ >YAB1                <-------TEIL      <---------AHL20(2) --------->AHL20(2)           --------->ARR14(2)   ttcacattttcccactattgctgattcatttttttttgtgaattatttcaaacccacataaaaaaatctttgtttaaatttaaaaccatggatccttcat  8079000                            <---------ARR14(2)                            --------->ARR14(2)                       <---------ZAT2                      ------>ZmHOX2a(1)                    <---------ANAC58                    <---------ANAC58                  <---------ARR14(2)                <---------HSFB2a(1)                --------->HSFB2a(1)        ---------->DOF2--------->ZAT2   <-------TEIL <---------HSFC1(2)                                                            ------- ------->MYB59<------ZmHOX2a(1)                    <---------ALFIN1  <----------DOF2        <-------- --------TOE2(3)--------->HSFC1(2)              <---------ALFIN1    --------->TOE2(3)       --------- ====================HOX2a_HOX2a               --------->MYB46(3)<---------CCA1(2)<---------AtLEC2 ====================HOX2a_HOX2a    <---------GLK1(2)      <<<<<<<<<TBF1     <---------At4g35610   ttaggttcattaaagaggagtttcctgctggattcagtgattctccatcaccaccatcttcttcttcatacctttattcatcttccatggctgaagcagc  8079100                                         <---------ARR14(3)                            --------->MYB46(3)                                                      <                    <---------At4g35610  --------->ARR11(3)   --------->AtMYB61        <---------ANAC46       ------>ZmHOX2a(2)  --------->ANAC46                  <---------ATERF1(1)        <---------ANAC58 -->RAP2.6(2)       --------->At4g35610  <---------ARR11(3) ------>NtERF2              <---------ANAC58 -At4g35610 ----------->RAV1(1)          --------->ARR14(3)<---------ALFIN1            <---------bZIP60(2) >At4g35610--------->MYB46(3)  --------->MYB46(3)  ------->TEIL            ---------->DOF2         --   cataaatgatccaacaacattgagctatccacaaccattagaaggtctccatgaatcagggccacctccatttttgacaaagacatatgacttggtggaa  8079200                      <---------ANAC58                      <---------ANAC58                 <---------ANAC46                                         --------->HSFB2a(2)       -                 <---------ANAC58                                    <----------DOF2                -                 <---------bZIP60(2)           --------->ATHB12  --------->ANAC58           <--------            --------->YAB1                    <-------TEIL  ================================HOX2a_HOX2a           <---------ATHB12                  <----------DOF2------>ZmHOX2a(2)               ---------          ------>MYB83<---------ANAC46     --------->At4g35610   --------->ANAC58           <--------          ------>MYB46(1)              --------->YAB1      =================================HOX2a_HOX2a         --------->WOX13(1)     --------->ARR14(2)         <------ZmHOX2a(2)              <---------TOE1(2)       --------->MYB46(3)       <---------ARR14(2)        --------->PCF2  <---------HSFB2a(2)     --- -------TEIL<---------ICU4     --------->GLK1(1)          <---------ARR14(2)         ------>ZmHOX2a(1) ------->CCA1(2) <---------ANAC58      --------->MYB52(1) --------->ARR14(2)   --------->ZAT6--------   gattcaagaaccaatcatgtcgtgtcttggagcaaatccaataacagcttcattgtctgggatccacaggccttttctgtaactctccttcccagattct  8079300  Previous    Next  AGI:  At3g22830.1    Description:  AT-HSFA6B (Arabidopsis thaliana heat shock transcription factor A6B); DNA binding / transcription factor. Identical to Heat stress transcription factor A-6b (HSFA6b) [Arabidopsis Thaliana] (GB:Q9LUH8); similar to ATHSFA2 (Arabidopsis thaliana heat shock transcription factor A2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G26150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22596.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Helix-turn-helix, Fis-type; (InterPro:IPR002197); contains InterPro domain Heat shock factor (HSF)-type, DNA-bindin Range:  from: 8078827    to: 8081058    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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