Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ---------->DOF2                   <---------YAB1                          --------->YAB1                 --------->ATHB51                    -------->P                 <---------AHL20(2)             <------ZmHOX2a(1)                 <---------ICU4            --------->CCA1(2)              <---------ARR11(3)<--------                 --------->AHL20(2)       --------->ARR11(3)              --------->ARR11(3)<--------                --------->ICU4            <---------AHL20(1) <---------AHL20(2)    --------->ANAC46<-             --------->AHL20(2)           --------->AHL20(1) --------->AHL20(2)--------->YAB1      <-             <---------AHL20(2)           <---------AHL20(2)<---------AHL20(2)<-------TEIL<---------AHL20(2)   ataaaactcacaagattaattatttttcagaaaagagaaactaatatataggacttacctatattaattgtttagagatattcatactccatttacttga  7684000                                                         <---------REM1(2)                                                     <-----------GT1                                                   <-----------GT1                                               <---------DAG2         <---------ANAC55(2)                   <----------DOF2   <---------YAB1                             <---------ANAC58                                    <--   <---------AHL20(2)                   --------->AHL20(2)            <----------DOF2            ---- -ANAC58 <---------ANAC55(1)            --------->AHL20(1)          --------->HSFB2a(1)    --------->ARR11(3) -ANAC58 --------->ANAC55(2)            <---------AHL20(1)          <---------HSFB2a(1)    <---------ARR11(3) --------DAG2                <---------CCA1(2)<---------ANAC58     ------->TEIL<-----------------AGL3 ---------DOF2    <---------GLK1(2)     <---------AHL20(2)  --------->ANAC46   ======================   acttttttattaagtgttcagattatgttccatctcttgtattttattgcttttttctctacacataagaacctttcagtttccatttatgaagatttat  7684100             <----------DOF2          <---------RVE1(1)                                                                   <------ZmHOX2a(2)         <---------GLK1(2)         <---------AHL20(2)          <---------ZAT6                <-------         --------->ARR14(2)       --------->AHL20(2)    --------->AHL20(2)                   --------         <---------ARR14(2)      <---------YAB1         <---------AHL20(2)       <---------AHL20(2) <---------------AtSPL3        <-----------------AGL3 --------->AHL20(2)         --------->AHL20(2) <---------------AtSPL8        <--------HAHB4<---------------AtSPL8             --------->AHL20(2) -------AHL20(2)              <---------YAB1 --------------->AtSPL3             <---------AHL20(2) ----->AHL20(2) ----------->GT1--------->YAB1--------------->AtSPL8       ----------->GT1   <-------- ================================================MADS_MADS     ----------->GT1  <---------AHL20(1)   aaaatggtacagatactttagtaaaatgttgtatcattatatggagagatgtacaaatttatatagagataatattcagtaatttaatttagacagatca  7684200                                                                                 --------->ARR14(2)          --------->YAB1     ---------->DOF2                                     <---------ARR14(2)    --------->TOE2(3)   ----------->GT1                                        --------->LBD16   ----------->GT1      <----------ID1                                       <---------LBD16 --ARR11(3)           ---------->DOF2                                      <-----------GT1 ->ARR11(3)       <----------ID1                                         <---------AHL20(2) -At4g35610     ---------->DOF2<----------ID1                            --------->AHL20(2)      ----   tacaaatgttaataacaaaaaagaaaaagaaaaaagacaaaactggaatagaattagagaactaaatacctctaattaaaccggatttgatggtagtata  7684300         <---------ICU4       <---------ARR11(3)                <----------ID1       --------->At4g35610     --------->TOE2(3)       --------->ARR11(3)              --------->MYB52(1)     --------->ZAT2       <----------DOF2 --       --------->GLK1(2)    ------>ZmHOX2a(1)                 <---------ZAT2    <---------AHL20(2)<--       --------->ARR14(3)  --------->TOE2(2)              --------->MYB52(1)    <-----------GT1   ---       <---------ARR14(3)  --------->TOE1(2)      ----------->GT1         --------->ANAC55(2)    ---- ----->ANAC46      ----------->GT1  <---------ANAC55(2)  <-----------GT1<-----------GT1   ---------->DOF2   caaaaccaaaatcttgacattttgttaatccttcgaatacataagggcaaaatagtaaaataccagctctgtttttacttattttctttcttaaaagaaa  7684400            <------ZmHOX2a(1)            =============HOX2a_HOX2a           <---------HSFB2a(1)           --------->HSFC1(2)                                           <---------ANAC58           <---------HSFC1(2)                                    <---------YAB1           --------->HSFB2a(1)    --------->At4g35610           <---------ARR11(3) --------->AHL20(2)      <------------CBF                       --------->ARR11(3) ----------->TBP     ------>ZmHOX2a(1)                     <---------MYB52(1) <---------AHL20(2) --------->TOE2(3)                     --------->LBD16  --------->SPL7           < --------->TBP =============HOX2a_HOX2a <----------DOF2   ----------->GT1<---------SPL7            <- -------AHL20(1)    --------->TOE1(3)*TSS                <---------HSFB2a(2)                       <- ------>AHL20(1)  <------ZmHOX2a(2) <----------DOF2      --------->HSFB2a(2)           <-----------GT1 ----->AHL20(2)------>ZmHOX2a(2)  <---------At4g35610   <---------LBD16 <---------ANAC58   ------>ZmHOX2a(1)   tatataaatacgaaggatcgatccttaaattgtttcagctttctttttgttttcattttccggtaatatcattttcgtccgacttgttttctcctccttg  7684500                                                                         ---------->DOF2                                                                        --------->AHL20(2)                                                                 ------->TEIL >>>>>>>>>>>>>>>>>LFY                         >>>>>>>>>TBF1              ------>MYB46(1) --------->LBD16 ---------MYB52(1)    >>>>>>>>>TBF1        --------->YAB1       --------->MYB52(1)     <------MYB46(1) --------RAP2.6(3) >>>>>>>>>TBF1           --------->TOE2(3)  <---------MYB52(2)       <------MYB83 ------GAMYB    >>>>>>>>>TBF1   --------->ALFIN1    ------>MYB83--------->ARR14(2)    <---------TOE1(2)   ccgttaagttccattgaagaagaagaagaagaaggtgtgattcaacgataaacctagcgagaaaacgaaccgcataaaatcgccattgtaggttttcgat  7684600                                                                         --------->ARR14(2)                                                                         --------->GLK1(2)                                                                         <---------ARR11(3)                                                                         <---------ARR14(2)                                                                   <---------HSFB2a(2)                                                                   --------->HSFB2a(2)                                                               <---------RVE1(1)                                                              <---------GLK1(2)                    --                               <-----------GT1                --------->ARR11(3)          --------->ARR14(2)                         <---------TOE2(3)                    <---------ARR11(3)          <---------ARR14(2)                 --------->ANAC58                        <---------HSFB2a(2)              --------->GLK1(2)                 --------->ANAC58       <---------YAB1   --------->HSFB2a(2) ------>ZmHOX2a(1)     <-   tttctcagtcttacatagctcgaaattgatgtataactggtttttattcatgctcgattctagagatttttagaaaatcctattccagtgagaatctaga  7684700                                                                                           <--------P                                                            <---------TOE1(3)           <---------TOE1(3)                           <---------ANAC46       <---------ZAT6                  <---------DAG2                           <---------ANAC58       ----------->GT1                 <----------DOF2                           <---------ANAC58       <---------ANAC46             <---------WRKY18(1)<--                        <---------MYB52(1)     <---------AtMYB61            <---------ANAC58   <-----             <---------ANAC58 <---------TOE2(2)--------->ALFIN1             <---------ANAC58 <------MYB46(1)             <---------ANAC58 <---------TOE1(2)<---------DEAR3(1)           <---------AtLEC2 <------MYB83 ------->GLK1(1)<---------ARR14(2)          <---------DEAR3(1)       <---------TOE2(3)  <---------TOE2(3) --------GLK1(1)--------->ARR14(2)  <------ZmHOX2a(1)       <---------TOE2(3)<---------WOX13(1)<-----   gatttccattttgaagcgtttcttctgtttcgtatgtaggaacgagacggtggtgttaatctatggttatggaggtttgcttgactttttgaggttggct  7684800                                           ----------->GT1                                 <---------ANAC58                                 <---------ANAC46                              <---------ARR14(2) <----------DOF2------>ZmHOX2a(2)<---------ANAC58  --------->ANAC46                   <----------DOF2 -------WRKY18(1)      ---------->DOF2   <---------WOX13(1)                         --------->HSFC1(2) ----ANAC58    --------->At4g35610    <---------YAB1  <---------ICU4                <---------HSFC1(2) ----ANAC58    <---------At4g35610<-------GAMYB  <-----------GT1                   ------->TEIL   tgacttttgaagttttgatctgaagaaaagaggtttcgttgtaattggtttatacatcatgtctgggtcgagtatgtataagacgaagctttgtattctg  7684900  Previous    Next  AGI:  At3g21810.1    Description:  zinc finger (CCCH-type) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO24160.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 7684437    to: 7688623    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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