Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                              <------                                                                                              <------                                         ------->GAMYB                                        -------                                        <---------MYB52(2)                             --------->At4g35610                                   --------->YAB1                                      <---------ZAT2                                --------->YAB1 <---------YAB1                          <---------STY1(2)        <------ZmHOX2a(2)       --------->WOX13(1)                             <---------ANAC58      <------ZmHOX2a(1)        --------->MYB46(3)       ---------->DOF2        <---------ANAC58 -------GLK1(2)              ----------->RAV1(1)--------->YAB1     --------->ANAC46    --------->ZAT2 ---->ICU4           ---------->DOF2    --------->MYB46(3)       <---------DOF5.7(2)   <---------At4g35610   gattgtgaggatcaaaatggttccaaaggcccaacaatcacaacaaactttgataaaaaaaagaagtaaacgtagcaattggcttcgctagctggaagct  7516700            <---------ANAC58            <---------ANAC58            <---------ANAC55(2)            <---------ANAC55(1)            --------->ANAC55(2)            <---------ANAC46           <-----------------------TaNAC69(2)           <-------TEIL                                        <----------DOF2          --------->CCA1(2)                                --------->WRKY38(1)         <---------ARR14(2)                                --------->WRKY45       ----------->ARR10                                   --------->WRKY12 <---------LBD16         --------->ANAC46                 --------->DOF5.7(2) <-----------RAV1(2)     --------->ANAC58               <---------MYB46(3) -->At4g35610   <---------AtLEC2                <---------AHL20(2) ---At4g35610  <-------TEIL                 --------->ATHB12  >>>>>>>>>>>>WRKY18 ---ZAT2 --------->ARR14(2) ----------->RAV1(1) --------->AHL20(2) <-----------GT1 -->ZAT2<------ZmHOX2a(1)--------->ANAC58  <---------YAB1<-------GAMYB   ggtccagggaggatacgtgcatggaacacacaacaaaaccttcttatgatttaaatggtcgttgacttttgacccttgtggttttttggacaaaaccctg  7516800                             <---------At4g35610                             --------->At4g35610                       --------->TOE1(1)                        --------->ARR11(3)                            --------->At4g35610                    ---------->DOF2                                 --------->YAB1                 --------->YAB1                               <---------TOE2(3)              --------->HSFB2a(2)                           <---------AHL20(2)                   <---              <---------HSFB2a(2)  <----------DOF2      <---------AHL20(2)                       ----       <---------AHL20(2)   <-----------GT1         <---------YAB1 <---------YAB1               -----      <-----------GT1   <---------ARR11(3)<---------YAB1--------->AHL20(2)  ---------->DOF2    <-----   tgtttttatttcatttctataaaaaagatttatctgcctttgttatgttttcttcttattaattaagttatcatcggacaaagttcaattactagttatt  7516900     --------->DAG2   ---------->DOF2          ----------->GT1 ------AHL20(2)     --------->YAB1 ----->AHL20(2)    <---------YAB1                          <---------At4g35610                      < ---->AHL20(2)  --------->ICU4                         --------->GLK1(2)                        ----- ----YAB1     ----------->GT1            --------->AHL20(2)--------->At4g35610       ------------>CBF   aaaaaaaaaggttctatagttattataagtttgtaacaaaaaaaaaaatgttgtcagaatcagttgataacacatttgtctaattccttcaattttgggc  7517000                                                                                        --------->ANAC46                                 <---------SPL7                                      <---------REM1(2)                                 <------NtERF2                            <---------ZAT18                               --------------->AtSPL8                     <---------ZAT14     <------         ---------->DOF2     <----------ID1                               --------->ZAT14     ------- --------->AHL20(2)   <---------ANAC55(2)                               --------->ZAT14<---------LBD16 --------->YAB1       --------->ANAC55(2)                            --------------------->WRI1 ---------ATHB12    <-----------GT1      <---------YAB1          <----------DOF2    ------>ZmHOX2a(1) ------->CBF        --------->AHL20(2)   <---------AHL20(2)  <----------DOF2*TSS    <-----------HVH21   caatgaaattcgaaagcccaaattacataatgggccgaaccatattattctctctctcgctctctttctttctctgtgctcttctccttcacggcgaagt  7517100                                   --------->SPL7                                 --------->ARR14(2)                                 <---------ARR14(2)             <---------MYB46(3)                                --------->ATERF1(1)           --------->ATERF1(1)                                --------->At4g35610           <------NtERF2                                <------NtERF2                 <---------LBD16                                <---------At4g35610           <---------At4g35610                               <---------MYB46(3)             ------>NtERF2                               <---------ATERF1(1)           <---------RAP2.3(1)                               <---------DEAR3(2)           <---------RAP2.3(2)                               ------>NtERF2  --------->TOE2(3)<---------DEAR3(1)                               <---------RAP2.3(1)          <---------RAP2.3(3)                               <---------ERF1 --------->TOE1(3)<---------ANAC46               -------                              <---------RAP2.3(2)           <---------RRTF1(2)                <------                              <---------RAP2.6(2)       ---------->DOF2                      <-------                             --------->ATERF1(1)    --------->ANAC46        ------>ZmHOX2a(1)--------                             <------NtERF2<---------ARR14(2)<---------RAP2.6(2)    <---------MYB52(1)                      <---------At4g35610 --------->ARR14(2)<---------DEAR3(1)    <-----------HVH21                      --------->At4g35610 <---------MYB52(1)<---------RRTF1(3)    <-------GAMYB                      --------->ZAT14  <---------------------WRI1  ===================HOX2a_HOX2a                 ------>ZmHOX2a(1)<---------ATERF1(1)------->GAMYB <------ZmHOX2a(2)        <-------- ---O2       <---------GLK1(1)<---------DEAR3(1) <---------WRKY12<------NtERF2 ------>ZmHOX2a(1) ---- -->O2 <---------AtLEC2    <---------DEAR3(1)<-----------------AGL1================HOX2a_HOX2a-------   gactcacttccatggattcctctctgctctcggcggctacggccgataccttcaacggcaatgcggcggatcaaattcctcctccgttacagcctccggg  7517200     ----------->HVH21     <---------YAB1   --------->CCA1(2)  <---------ARR14(2)  --------->ARR14(2) -->LBD16 ---HSFB2a(2)                    <---------LBD16 --LBD16                      <---------At4g35610                  <---------ARR11(3) ->HSFB2a(2)                  --------->At4g35610                 --------->REM1(1)              <--- -LBD16                       --------->ZAT2              --------->YAB1                     <------- ----->MYB52(1)            <------ZmHOX2a(2)              ------>ZmHOX2a(2)             ---------->ID1 -->HSFB2a(2)      <-----------HVH21  <------ZmHOX2a(2)   ----------->GT1           <----------DOF2--   aacggatatgactggaatttccttcagggatcagctctggatcaattcataccctcttgatcgtaactacatcttcgattacttcgctttgtctcctttc  7517300                                     <-------TEIL                                      <----------DOF2                                    <------ZmHOX2a(2)                                --------->ZAT14                                   --------->ARR14(2)                                <---------ZAT14                                   --------->ARR11(3)                           ------>ZmHOX2a(1)                                   <---------ARR14(2)                        ------>ZmHOX2a(1)                          <---------LBD16             ------>ZmHOX2a(2) --------->At4g35610                      --------->GLK1(2)    <---------At5g28300          <---------At4g35610   ------- --------GT1         <---------GLK1(2)    <-----------GT1   <---------ALFIN1<---------ALFIN1  <------ ---DOF2    ----------->RAV1(1)    <---------ARR11(3) ==============================HOX2a_HOX2a ------->ANAC46   --------->YAB1 ----------->ARR10    =================================HOX2a_HOX2a   tacgatacaacttgcaacaatgagattcttcggagaagatccattcaccctctcgatctctctcacctctcgtaagctcctcctcactgctctacagata  7517400                                                        --------->TOE1(2)                                                        <---------LBD16                                                       ----------->RAV1(2)                                                       --------->O2                                                       <---------ZAT2                                                       <---------O2                                                       --------->TGA1a                                                       <---------TGA1a                                                       --------->ZAT2                                                    ----------->HVH21                                                <------MYB46(1)                                                <------MYB83                                          <---------TOE2(3)  <---------ARR14(2)                            <----------DOF2    --------->MYB59                                    ---                            =====================================bZIP_DOF                    --------                  <---------TOE2(3)       <---------TOE1(3)  --------->ARR14(2)             --------- -->ARR14(2)    =================================================bZIP_DOF                 <---------ANAC46 ---ARR14(2)    ---------->DOF2--------->MYB59 <---------AtMYB61 <---------ZAT6          <---------TOE2(3)   gggttatgttgaaactcataaaggtttcaactttaggtcgaattagggtttggtctcacctgggatactgttagagaaatggagatagatttaggtggag  7517500                                                  ----------->HVH21                                  <---------AHL20(2)                                  --------->AHL20(1)                                  --------->AHL20(2)                                  <---------AHL20(1)       <---------HSFB2a(2)                                 --------->AHL20(2)        --------->HSFB2a(2)    <---------ZAT6           <---------YAB1     --------->At4g35610                        ------>MYB83 ------>GLK1(2)       >>>>>>>>>>>>>>>>>LFY   <------ZmHOX2a(1)                             ------>MYB46(1) --->GT1         <---------WOX13(1)  <---------AHL20(2) --------->AGP1                   --------->AtMYB61 >ALFIN1       --------->ATHB12 <---------YAB1  <---------At4g35610                      <---------MYB59   aatttagtgacaatgtttgattgaaaccattgtgattatattatgtaggaagatgacaggtctagaatatatgttaactgatgctactgaaccaaacctg  7517600  Previous    Next  AGI:  At3g21350.1    Description:  RNA polymerase transcriptional regulation mediator-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN68925.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45772.1); contains InterPro domain Mediator complex, subunit 6, metazoa/plant (InterPro:IPR016820); contains InterPro domain MED6 mediator; (InterPro:IPR007018) Range:  from: 7517076    to: 7518750    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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