Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------ZAT6 ------YAB1 ---->AHL20(1) -----AHL20(1)                                                <---------ATHB12 -----AHL20(2)                                               <-----------------AGL1 --->YAB1                                           ------>ZmHOX2a(1)                  <---------GLK1(2) ----AHL20(2)                                    <---------YAB1                        <---------ARR11(3) --->AHL20(2)                                  --------->YAB1<-----------------AG--------->GLK1(2)<-- ---YAB1                           ----------->GT1 --------->TOE2(3)   ---------->DOF2 --------->ARR11(3) >YAB1             <---------AHL20(2)        ------->TEIL--------->TOE2(3) <----------ID1  <---------YAB1   tatttagtcttatctatgtatgaaattggtttggatgttgaaaaatgaatcatccttatcgtcaaccattttggaaagagacaaatctagattttgattt  6686700                            --------->AHL20(1)                            <---------AHL20(1)                            <---------AHL20(2)                         --------->YAB1                         --------->AHL20(2)                        <---------YAB1                    --------->AHL20(2)                  <---------ARR11(3)                  --------->ARR11(3)               <---------TOE2(3)              ---------->DOF2             --------->AHL20(2) --------->YAB1               <---------ANAC46  <------ZmHOX2a(2)      <-----------GT1<---------AHL20(2)<---------YAB1   <-----------RAV1(1)   <---------ARR11(3) --------DOF2<---------AHL20(2) <-----------GT1     <---------YAB1            --------->ARR11(3)   <-   ctttttttttacaaattaaagattttataatatatcacaatattgttgaagattacaattgtggcatatgtcaatttgaagatcaatttgaatttttgat  6686800                                                                                     --------->ATHB12                                                                                  --------->YAB1                                                                               <---------ICU4                                                                               <--------HAHB4                                                                              --------->ICU4                                                                              <---------YAB1                                                                            <--------HAHB4                                          <---------AHL20(2)                <---------ICU4                                        <---------AHL20(2)                  --------->YAB1                                       <---------ARR11(3)                  <---------YAB1                                       --------->AHL20(2)                  --------->ICU4                                       --------->ARR11(3)                  <---------ATHB12                                       <---------AHL20(2)               --------->KAN4(1)    --------       --------->YAB1                  <---------AHL20(1)         ---------->DOF2<---------YAB1    --    --------------->AGL15        ----------->GT1  <---------AHL20(2)   <---------KAN4(2)     <-------    =================================================================================================    <---------------AGL15  --------->TOE1(2)      --------->AHL20(2)  --------->YAB1<---------YAB1<-- ------TEIL         ---------->DOF2    --------->AHL20(1) <---------MYB59--------->YAB1   <----------   atacatctaaaataagaaaactaaaagaacataagaagtaatatatttttaaaaaattgacctaaaaacaaagaataatcattattatgatttaactcca  6686900                                    <---------ARR11(1)                                    --------->ARR14(2)                             <---------ALFIN1                             --------->AtMYB61                            <---------MYB55(2)                            --------->MYB46(3)                            <---------ATHB12                           ------>MYB83                           ------>MYB46(1)                           -------->P                                              --------->YAB1                      ------>ZmHOX2a(2)                                    <-----------HVH21                     <------ZmHOX2a(2)                                    <---------O2                     --------->GLK1(1)                                    --------->TGA1a                    <---------ARR14(2)         --------->ETT(1)           --------->bZIP60(2)                    <---------ARR11(3)         <---------ANAC46           <---------TGA1a                    --------->ARR11(3)       <-----------HVH21            --------->O2 ------->AGL15      --------->ARR14(2)      <-----------RAV1(1)       <---------At5g28300 ------->YAB1     --------->ANAC58  <---------ARR14(2)               <-----------GT1  --------->ATHB12 --------AGL15--------->ANAC58      <-----------ARR10           <---------ATHB12   --------->TOE2(3) ========MADS_MADS--------->ANAC58  ------->TEIL       --------->MYB52(1) =========================== -------ATHB12--------->ANAC58     <---------ARR14(1)<---------MYB52(2)   --------->ANAC46 -GT1         --------->ANAC46     <---------CCA1(2) --------->MYB46(3) <---------ALFIN1   atgagaaaacaattccaagcacgatctccaaccactcgaatcttcactgtcggaaacaaacggccaatgttttaccacgtcgcattcttaattggatgta  6687000                                                         --------->AHL20(2)                                                         <---------AHL20(2)                        --                                                        <---------AHL20(2)                        ---                                                        --------->AHL20(2)                        ---                                                    =================================================                                                    <----------DOF2                          --------                                                    --------------->AGL15                  --------->AHL20(2)       --------->ANAC58                        <-------MYC3  --------->AHL20(2)  <---------AHL20(2)<-       --------->ANAC58         <-----------GT1------->MYC3  <---------AHL20(2)  -------->HAHB4 -----       --------->ANAC46     <----------DOF2   --------->O2  --------->AHL20(2)  --------->ICU4------- <----------DOF2   --------->TOE2(3)          --------->ANAC46     <---------ZAT6<---------ICU4 ----- ===========bZIP_DOF   <-----------GT1      <---------ALFIN1<---------AHL20(2)  <---------YAB1-------   agtctttacaagcacttaaaacattaaactcttttttctcattcgtccacgtttctttttaaattaatactgttaacagataattattcacaaaaaaata  6687100                                                                <---------ALFIN1                                                            <------NtERF2                                                            --------->At4g35610                                                            <---------At4g35610                                                         <---------At4g35610                                                         --------->At4g35610                                                         --------->ATERF1(1)                                                        <---------RAP2.3(1)                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                       <---------RAP2.6(2)                                                       <---------ATERF1(2)                                                       <---------RAP2.3(2) ------->ARR11(3)                                      --------->ATERF1(2) ------>RVE1(1)                                 --------->REM1(2) ------>CCA1(1)                                 <-----------HVH21------->GAMYB                      - ===============================================MADS_MADS<------NtERF2                  <---------ANAC58 ->YAB1                                       *TSS<---------bZIP60(2)   ---------->ID1  <---------ANAC58 --------ARR11(3)                         <---------At4g35610 ----------->RAV1(1)      <---------At4g35610 ---->YAB1                    <-----------------AGL3   <---------DEAR3(1)<---------ANAC58           < -->AHL20(2)          <-----------HVH21   <---------ZAT2<---------ORA47(2) <---------CCA1(2) <------- ---->AHL20(2)    <---------TOE2(3)     <---------RAP2.3(3)--------->RAP2.6(2)       <---------CCA1(2) -->AHL20(1)    ---------->DOF2  --------->AHL20(2)   --------->RAP2.6(3)<---------ANAC58   ---------   atatctgaagaacaaaaaaaaaggtttcagggccttaaaatggctgctcgtgtcgaggcggcagcaacacacttgtcgtctctccctgtagcttctctgg  6687200              <---------ARR11(1)              ------->TEIL              <---------ARR14(2)              --------->GLK1(2)              --------->ARR14(2)      <------MYB83                                              -----             <---------CCA1(2)        <------MYB46(1)                                          <-----           <---------ANAC55(2)        ----------->GT1                                         -------           --------->ANAC55(2)       --------->MYB59                      <-----------GT1     <------           --------->ANAC58      <---------AHL20(2)                  <---------AHL20(2)       <------       <-----------HVH21        --------->AHL20(2)                   --------->AHL20(2)       <------ -------->ARR14(2)              --------->AHL20(1)           <----------DOF2               --------->HSFB2a(2) ---------ARR14(2)              <---------AHL20(1)      <---------At4g35610    <---------MYB52(1) --LBD16   --------->ANAC58     <---------AHL20(2)      <---------ZAT2  <---------YAB1     <---------HSFB2a(2) ------------>WRI1             --------->AHL20(2)  <-----------GT1 <----------DOF2        <---------LBD16   agttttcgcagtcacgaatcttgttttgaagaaattaatttggtaaaacatattttcgagctcctttctcttttattatccgttttctgacttctggatc  6687300          =================================HOX2a_HOX2a   --------->YAB1          <------ZmHOX2a(2)                              <---------ICU4         <---------ARR14(2)                             --------->ICU4      --------->ETT(1)                                  <---------YAB1    <-----------HVH21                                 --------->YAB1   <-----------RAV1(1)              ------>ZmHOX2a(1) <---------ICU4 <----------DOF2          ---------->ID1             <---------ATHB12 ->ZmHOX2a(2)           <-----------RAV1(1)         ------->TEIL ----At4g35610      <---------AHL20(2)     <---------ANAC58 -->ARR14(2)       <---------AHL20(2)      <---------ANAC46            <---------REM1(1) ---ARR11(3)       --------->AHL20(2)      <---------ANAC58      ------->TEIL ---AGP1 --------->ARR14(2)    <----------DOF2   <---------YAB1  <-------TEIL ---ARR14(2)       <---------AHL20(1)   <---------MYB52(1) <---------YAB1             <----------DOF2   tgtctttgtcggatcatccaatttttttgttgtctttcctctgtttcgtttatgaatcatgatgatgtacatgttgtaactgaagtaacttttggttatc  6687400                                             <-----------GT1                             <---------CCA1(1)                             <---------RVE1(1)                            --------->ARR11(3)                            <---------ARR11(3)                        <---------TOE2(3)                      <-----------GT1   <---------AHL20(2)            <---------TOE1(3)                 --------->GLK1(2)     --------->AHL20(2)        <----------DOF2        ---------->DOF2 --------->ANAC55(2)<---------AHL20(2)---------->ID1                  ------>ZmHOX2a(2)    <---------ZAT6 <---------ICU4      <---------AHL20(2)  <-----------RAV1(1)      <---------AHL20(2)   aaattagagttaaagagagaatttttacgagatatttgttataaatttatcgatttgattcttgttgctattagggttttgtctatttgattcgatcggg  6687500                                                 <---------MYB46(3)                                       ------>ZmHOX2a(1)                                     ------>ZmHOX2a(2)                                     <---------HSFC1(2)                                     --------->HSFC1(2)                                   <---------GLK1(2)                                   <---------ARR11(3)                        --------->GLK1(2)      <---------ANAC58                        --------->ARR14(2)     <---------ANAC58                        <---------ARR14(2)   <---------YAB1                                        --                  --------->ALFIN1 --------->ARR11(3)                                              --                  <---------MYB46(3)<------ZmHOX2a(2)       <---------At4g35610                   <--                <---------ANAC58   --------->ARR14(2) <------MYB83                        <---------ZAT14                <---------ANAC58   <---------ARR14(2) <---------ANAC46                    --------->ZAT14           --------->CCA1(2)     ----------->ARR10    <------MYB46(1) ---------->ID1 <---------YAB1<-   ttttttttaagagaaatgggttgtggaatctggaatagatccttctcatgcttgttgggttttgctgattttctcgtttttggttttatgagtaaactct  6687600  Previous    Next  AGI:  At3g19290.1    Description:  ABF4 (ABRE BINDING FACTOR 4); DNA binding / transcription activator/ transcription factor. similar to ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G49720.1); similar to abscisic acid responsive elements-binding protein 2 [Populus trichocarpa] (GB:ABN58425.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827) Range:  from: 6687146    to: 6690129    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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