Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               --------->ARR14(2)             <---------ARR14(2)                                           <---------YAB1             --------->ARR11(3)                                         --------->YAB1             <---------ARR11(3)                                        <------ZmHOX2a(2)             <-----------ARR10                                        <---------ARR11(3)     --------->YAB1                                             <----------DOF2             <-------- <---------------AGL15                                         ------>ZmHOX2a(2)            --------- ---------GT1--------->GLK1(2)                               <---------ARR11(3)            <---------ATHB12 --->GT1     <---------ARR11(1)                              --------->ARR11(3)           ------>MYB46(1) --ZAT6     <---------ARR14(1)       --------->GLK1(2)    <---------WOX13(1)              ------>MYB83 --ANAC46   <---------CCA1(2)        --------->ARR14(2)--------->ICU4 --------->ARR11(3) --------->WOX13(1)   aaaccattcatagcaaatcttgttatccattaaactcagaatccaagagcaattgaaaagattgatctttgagatcataagtgaagaagaccaatcatgg  6416200                                                                      --------->ANAC58                                  <---------------AGL15               --------->ANAC58                                 <-----------------AGL3 --------->LBD16                                 ====================================================================                             --------->LBD16            <---------HSFB2a(2)                            --------->ANAC46            --------->HSFB2a(2)   <---------ZAT6           --------->ANAC58            ------>ZmHOX2a(1)   ----------->GT1       -------->P     <---------------AtSPL8   <-----------GT1 -ICU4                  <-----------GT1XXXXXXXXXXXXXXXXXXXX>MIR4227 --------->AtMYB61               - >YAB1        --------->YAB1--------->ANAC58           <---------LBD16--------->ANAC46              <   aagtagagataaacaatgagaagaattaacccgaaactaaaactggtaccaattcttcctggaaataaaaccacacaatgtctcacataaacccaaatag  6416300                <----------ID1                ----------->GT1                                              --------->TOE2(3)            ---------->DOF2                                               <-----------GT1 --------------->AGL15                        ------>MYB46(1)        <---------AHL20(2) <---------------AGL15   --------->DAG2       ------>MYB83           --------->AHL20(2) ================MADS_MADS                  --------->TOE2(3)    <---------AHL20(2) -------->TOE2(3)       ---------->DOF2     <---------MYB59     --------->AHL20(2) ---------MYB59----------->GT1            ------->TEIL        >>>>>>>>>GATA-1--------->TOE1(3)   aacctaaattgagtaaaagggaaaaaaaaagtcaaactaaattgaacctaattagagtttaatagataaaattatataaccctaaaattgagaagtagac  6416400                                                                      <<<<<<<<<TBF1                                                                   <<<<<<<<<TBF1                  ---                                                             --------->HSFC1(2)                   <--                                          --------->ZAT6     <---------HSFC1(2)                   ---                                  --------->ARR11(3)        ------>MYB46(1)              ---------->DOF2    --------->CCA1(2)             <---------ARR11(3)        ------>MYB83             ---------->DOF2   aagaagatagacagaactcacttgaattcgaatagagctcttcatcactaaaccctaagaccaagcttcttcttcttctagggtttcgaaagaaagtaga  6416500                                                                                           --------->ANAC58                                                                                           --------->ANAC46                                                                                           --------->ANAC58                                                     <---------TOE2(3)                 --------->ANAC58                                             <---------TOE1(2)                <---------AHL20(2) ------>ANAC58                              >>>>>>>ZML2 *TSS                  --------->AHL20(2) --------ID1                             <---------ARR11(3)            ----------->GT1 --------->ANAC58 ------>ANAC58         --------->ARR14(2)--------->ARR11(3)     <---------LBD16 ---------->DOF2   acgacaacgagtttgtttagctctggttcttcaaattttccaagttctaggttctatggtttttttttcggagaagtaaattaaaagactcgcacacaaa  6416600                                                                                              -------                                                                                              -------                                                                                              -------                                     <---------ANAC46  <---------ALFIN1                      --------                         <---------TOE2(2)            ----------------->AGL3                 <-------                         <---------TOE1(3)   >>>>>>>>>GT-1                                <----------                         <---------TOE1(2) <-------GAMYB         <--------P               --------->MYB46(3)                         <---------TOE2(3)----------->GT1     <---------TOE1(3)          -------->P                 <----------DOF2 <---------ANAC58   <---------TCP15(1)                   ------>MYB46(1)          ------------>CBF       <---------ANAC58   --------->PCF2--------------->AtSPL8 ------>MYB83     --------->AHL20(2)<---------MYB52(1) <---------MYB46(3)  <---------TOE2(3)  --------->AHL20(2)   aaaaaaaaaaaatacaattctttcgcttaggttttgcttctgtgtggttaataggtcccacttgaaggtaagtactcttcagtttaaatccaaccgttga  6416700                                                                                 <----------DOF2                                                                                 <---------DAG2                                                                              <-----------GT1                                                                              ---------->ID1                                                                           --------------->AtSPL8      <----------DOF2                                                    <----------DOF2      ------>ZmHOX2a(1)                                                 ------>ZmHOX2a(2) -->WRKY45                                                            --------->ARR11(3) -->WRKY38(1)                                         <----------DOF2 --------->ARR14(2) -->WRKY12                     --------->TOE2(3)      <---------DAG2  <---------AGP1 <-----------GT1 ->DOF5.7(2)              <---------ICU4           <---------ALFIN1   <---------ARR14(2) --MYB52(1)          <---------MYB52(1)         --------->ANAC46      <---------ARR11(3) --AtMYB77<-----------GT1<---------YAB1   --------->RAP2.6(2)        <---------CCA1(2)       <-------   ctaaaatccttttaatctcacccgttgattatttcttaaataagccgaacacaacactttattgtccagttggatcttttgtacttttttctatttttca  6416800                <----------DOF2            ---------->ID1            <-----------GT1        <----------DOF2       <---------DAG2                                                     <---------AHL20(2)     ---------->ID1                            <---------At4g35610 --------->At4g35610   --------->WRKY12                            --------->At4g35610 <---------At4g35610   --------->WRKY38(1)                <---------WOX13(1)     --------->AHL20(2)                  <---   ----------->HVH21                --------->ATHB12 ---------->DOF2    <---------ANAC55(2)    <----- <----------DOF2<---------DAG2     <---------YAB1 --------->At4g35610   --------->ANAC55(2) <-------- ----GT1<---------DAG2       <------ZmHOX2a(1) <---------ZAT2<---------AHL20(2)  <---------YAB1<-----   tttctttgacctttttccctttttaatgcgaggacatatgattggagagagctgctaaagtatttttttagcttaagtaatttctgattgtgttttactt  6416900                                                                                --------->YAB1                                                                             <---------ICU4                                                                             --------->YAB1       ---                                                                        <------NtERF2            ---- --------->ANAC46        --------->STY1(1)                            <---------LBD16<---------MYB52(2) --------GT1       <---------ANAC58             --------->TOE2(3)    <---------LBD16 --------->MYB46(3) ----DAG2          <---------ANAC58           <---------ATHB12   <---------GLK1(2) <-----------GT1<-- ---GT1        ---------->DOF2          --------->YAB1        --------->YAB1<---------ATHB12     ---- -----DOF2 --------->TOE2(3)       <---------AHL20(2)      --------->YAB1   --------->ICU4     ------   tacccgtcttaaaacttaaaagcttgcctagggtttttttattcatcaaacattaatcgtataatcaaattctcggcaataagtataacaaaccaaaaaa  6417000                                           --------->TOE2(2)                         --------->MYB46(3)            ---------->DOF2                --------->TOE1(2)                 --------->YAB1         < ------>ARR11(3)                  <-----------HVH21                         <---------ATHB12        < ----->CCA1(1)                --------->DAG2                                --------->AHL20(2)  ----- -------ARR11(3)             ---------->DOF2                           --------->ANAC46         <---- ----->RVE1(1)             <------ZmHOX2a(1)                 --------->TOE2(3)  --------->YAB1 <----- --->AHL20(2)     <------ZmHOX2a(1)   <---------MYB52(2)    <---------ZAT6  --------->ICU4 ----------   aatctcagaataacaaaagaggaagtataggaaaagtgtcactaacatgggagacattactagtcttaattctcagcaataaatataacaaacaaaagaa  6417100  Previous    Next  AGI:  At3g18640.1    Description:  zinc finger protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26850.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G26850.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN61511.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 6413307    to: 6416556    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version