Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ZAT18                                                           --------->ZAT18                                     <----------DOF2      <---------ANAC58                               <---------At4g35610        <---------ANAC58        --------->CCA1(2)                               --------->At4g35610       --------------->AtSPL8  --------->ARR11(3)                       --------->TOE2(3)     ---------->DOF2      --------->AHL20(2)          -------         <---------AHL20(2)   --------->MYB52(2)         <---------------AtSPL8  <---------ARR11(3)         --------->AHL20(2) <---------MYB52(1)   ----------->GT1<---------------AGL15  <-----------GT1   agagataacatttaaaaattcaaaacattagttagctgtctttatacaaaagagttatttgtgtaccaaaaaatagaaaacgagatatatgaccacatga  6023500                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                 --------->CCA1(2)                                                 <-                        >>>>>>>>>>FUS3                                                             <-                  --------->ANAC58                                                                 --                  <---------ANAC55(2)                                                          ------                  --------->ANAC58                                     --------->ANAC58  <---------HSFB2a(2)                  --------->ANAC46<-------TEIL                         --------->ANAC58  >>>>>>>ZML2-       <---------ANAC58 >>>>>>>>>>ABI3                                <---------------AtSPL3  -------       <---------AtLEC2--------->ANAC58                      <----------DOF2             --------->HSFB2a(2)       <---------ANAC58--------->AtLEC2                  ----------->HVH21               <---------HSFC1(1)     <---------YAB1    --------->ANAC58                --------->At4g35610       <---------AtLEC2---- -->ICU4          --------->ANAC55(2)                  <---------At4g35610<-------TEIL   --------->HSFC1(1)   tgagtttatgcatgcctattacgccatgcaaatagatacacacacacatagttgtgcctctgactttgtctgcaagtacgtttgtatggttctagacagt  6023600        ------>ZmHOX2a(1) ------->ATHB1 ---------AHL20(2) ---------ICU4 -------->ATHB12                                           <---------ICU4 -------->ATHB51                                           --------->YAB1 --------ATHB51             --------->ARR14(2)     --------->LBD16 --------YAB1               <---------ARR14(2)    <---------ANAC58 ------->ICU4     --------->ANAC58                <---------ANAC46                                 -- --->At5g28300    --------->ANAC58                <---------ANAC58            --------->ANAC58   <--- ------->HAHB4    --------->ANAC46               <---------LBD16              --------->ANAC58 ------ ---->GT1       <---------ALFIN1       <---------TOE2(3)  <---------ATHB12  ---------->DOF2   ------- ----->YAB1   <---------ALFIN1       ---------->DOF2      --------->ICU4<----------DOF2       <------   aattattgtcctaaacccacacgctctgtgaatactcactaaaggttgttttccgtagaaatcatgaacaaagactttaaaagcaaaacagaacaataaa  6023700           <---------WRKY12      <---------ICU4  <---------AHL20(2)                             --------->ATHB12                                  <-  --------->AHL20(2)                           <<<<<<<<<<<<<<<<<LFY                         <-------- <---------ATHB12                             --------->ANAC46                              <-------- --------->AHL20(2)                           --------->ANAC58                              <-------- ------->WOX13(1)                             --------->ANAC58                              --------- ------ATHB12                             --------->CCA1(2)                                ------>MYB83 --->WOX13(1)           <---------ZAT6   --------->ARR14(2)                                ------>MYB46(1) -->AHL20(2)       --------->CCA1(2)     <---------ARR14(2)     --------->At4g35610      --------->TOE2(2) ---AHL20(2)   ------->GAMYB---------->DOF2<-------TEIL <---------WOX13(1)               --------->TOE1(2)   tcaattaataagttcaacgggatatagtggaaaagaaaacacagatacacaccattggattgaaacagttgcatttgtggtcttacataaacctacgtgt  6023800             --------->AtMYB61            <---------ATHB12            --------->MYB46(3)            <---------MYB55(2)           -------->P      --------->ANAC58      --------->ANAC58                                              ---------->DOF2      --------->ANAC46                                            <------NtERF2  --------->YAB1                                                <---------PCF2 ---------DOF2     <----------DOF2                              --------->PCF5 -ANAC46   --------->ANAC58                                     --------->TCP16(1)    <-------TEIL << -ANAC58   ------>MYB83                                    <---------ANAC58           ------------>CBF -ANAC58   ------>MYB46(1)<----------DOF2                  <---------ANAC58     ---------->DOF2 <---- >ANAC55(2)--------->ANAC58                            <----------DOF2     ---------->DOF2     <-----   tcttttataagccaaccaatacttttctctttttttttgtttgaaacgagttgcagactttgagtggccccaaagaagaaagaaaagatgcaatttcctt  6023900                                                                                                  ---                                                                                         --------->MYB46(3)                                                                                        >>>>>>>>>>>>>                                                                   --------->ARR11(3)   <<<<<<<<<<<<<                                                               ---------->DOF2        ------->GAMYB                                                   --------->TOE2(3)                 <---------MYB52(2) <<<<<<<<MYB80                                   --------->ARR11(3)--------->AHL20(1)--------->MYB46(3) -----MYB52(1)                     *TSS          <---------ARR11(3)<---------ARR11(3)<---------MYB55(2) -----DOF2          --------->TOE1(1)   <----------DOF2---------->DOF2               --------->DEAR3(1)   tggtttgatattctcttcaacctcttacctctctattctcgtctttagcaaaatctcaaaagacaaaaagatattgatgtctctccaacgacccaatggg  6024000                                          --------->ALFIN1                                        <------MYB46(1)                                        <------MYB83                                       --------->MYB111(2)                                       <---------AtMYB61                      <------MYB46(1)                                       <---------MYB46(3)                     <------MYB83                                      <---------MYB55(1)               <---------------AGL15                  <---------------AGL15--------->MYB46(2)              --------------->AGL15                  --------->ANAC46   <---------MYB52(1)               --------->TOE2(3)                  --------------->AGL15--------->MYB111(1)            <-----------------AGL3 ------>GLK1(1)  ======================================================================MADS_MADS >>>>LFY         ----------------->AGL3--------->MYB55(2)           <-----------GT1             ----- <<<<LFY ---------->ID1---------->DOF2<--------P                   <---------AHL20(2)         <------   aactcgagttcgtcttcttcccacaagaagcacaaaactggtaggtgttgaaagaaacttatctaatatttaacttaatttggtttagagaaattggttt  6024100                                                                                        <------NtERF2                                                                                       ------>NtERF2                                                                                      --------->RAP2.3(3)                                                                                      ----------->HVH21                                                                                      --------->RAP2.3(2)                                                                                      --------->At1g77200                                                                                      --------->DEAR3(1)                                                                                      --------->DREB2C(2)                                                                                     --------->RAP2.3(1)                                                                                     <------NtERF2                                                                                     --------->RRTF1(1)                                                                                     --------->ATERF1(1)                                                                                     --------->ERF1                                                                                     --------->ORA47(2)                                                                                     --------->DEAR3(2)                                                      --------->ZAT2                ------>NtERF2                                                      <---------ZAT2                <---------ATERF1(1)                                                      --------->At4g35610          --------->DEAR3(1)                                            <---------bZIP60(2)                   --------->At4g35610                                           <<<<<<<GRF7----------->RAV1(2)         <---------ABI4(2)                                         ------>ZmHOX2a(1)                       <---------ATERF1(1)                                         ==========================HOX2a_HOX2a <---------ZAT2                        <------ZmHOX2a(1)----------->HVH21  <------ZmHOX2a(2)  --------->ZAT2                    --------->ICU4     ----------------->AGL1      <-------MYC3<---------At4g35610         --------->At4g35610           <-----------------AGL1      ------->MYC3--------->At4g35610 ------>GT1  ---------->DOF2<---------MYB46(3)     <---------At4g35610      --------->At4g35610 ---ANAC46  <------ZmHOX2a(1)      <---------MYB46(3) <---------At4g35610  --------->ANAC46       <--   gtataattctcagaggaaagtgatgaggagttgttgatggttcctgacatggaagcagctggatcaacatgtgttctaagcagcagcgccgacgatggag  6024200                                                       --------->ALFIN1                                                      --------->LBD16                                                     --------->DEAR3(1)                                                     <---------ANAC46                                                    <------NtERF2                                                    --------->ATERF1(1)                                                   --------->ABI4(1)                                                   ------>NtERF2                                                  --------->DEAR3(1)                                                  --------->RRTF1(3)                                                  --------->RAP2.3(3)              <---------WRKY18(1)                 --------->RAP2.3(2)           <---------ANAC58                       <---------DEAR3(1)           <---------ANAC58                      --------->ORA47(2)          <---------ZAT2                         --------->RAP2.3(1)          --------->ZAT2                         --------->DEAR4(2)       --------->LBD16                           --------->ERF1     <---------LBD16                             --------->RRTF1(1)   <---------ARR14(2)                            --------->ATERF1(1)   --------->GLK1(2)                           --------->ANAC46 --------->MYB46(3)                      --------->At4g35610                            ------------- -------WRKY38(1)                        <---------At4g35610              ---------->DOF2       -----   tcaacaatccggagcttgaccagactcaaaatggagtctctacagctaaacgccgccgtggaagaaaccctgttgataaagaatatagaagcctcaagag  6024300        <---------YAB1      --------->YAB1      <---------ICU4                                                                <-----------GT1     <---------ATHB12                                                       ----------->GT1     --------->ICU4                                                       ----------->GT1         <-- <---------ATHB12                                                         <---------ANAC46 --------->ATHB12 <---------YAB1      <----------DOF2                                --------->GLK1(2)     <---------YAB1 ---->AGL1----------->GT1                                ----------->GT1 --------->ALFIN1<---------GLK1(2) ------>GT1          <---------DAG2         <---------LBD16    ---------->DOF2   <---------ICU4 <----   gtaatcaatgatgagtaaaaaaacttttttttcttagcattcgatttgtggaattgaaatggtaaaaaagaaactgtggtgaaaaattacagattattga  6024400  Previous    Next  AGI:  At3g17609.1    Description:  HYH (HY5-HOMOLOG); DNA binding / transcription factor. Identical to Transcription factor HY5-like (HYH) [Arabidopsis Thaliana] (GB:Q8W191;GB:Q8LB41;GB:Q9LUN6); similar to HY5 (ELONGATED HYPOCOTYL 5), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G11260.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81308.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 6023935    to: 6024699    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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