Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------------->AGL15    <---------------AGL15                                                                   <--------   <-----------------AGL3                                                                 --------->ARR14(2)   ----------------->AGL3                                                                 <---------ARR14(2)   ----------------->AGL2            <-----------GT1     <-----------GT1                  ------->TEIL ------->TOE1(1)            ----------->GT1            <---------AHL20(2)                <---------CCA1(2) ------->TOE2(1)           ----------->GT1       --------->AHL20(2)                   ------->MYC3 ---GT1                    <---------MYB46(3)    <---------AHL20(2)    <---------At4g35610--------->ARR11(3) >YAB1   ---------->DOF2--------->ALFIN1       <----------DOF2    ---------->ID1      <-------MYC3   ctcgtactaaataaagaactatatgtgtgtgggtaatattatccaatctctttaaatttaaaccacttgtctcatctcatatgcaaaacgtgtatcttgt  5547300                                          <---------ZAT18                                          --------->ZAT18                                  ----------->HVH21                                <---------ANAC58                                 --------->ARR14(2)                                <---------ANAC58                       <---------ARR14(2)       -----                                <---------ANAC55(2)                 <---------ANAC58           ------      --------->ANAC58          --------->ANAC55(2)  --------->ANAC58  --------->ARR14(2)      ------      --------->ANAC46          --------->ANAC46     --------->ANAC58<----------DOF2          <------      --------->ANAC58          ----------->GT1     --------->DAG2  <---------ANAC58      --------->AHL20(2) -ANAC46                      ------>ZmHOX2a(2)    ---------->DOF2  <---------ANAC46<-----------GT1   aagaacacacgctcttctaatatagaaatagatcgcgtaacaagtggacttggaaaagctatagtttatggcgttttcggacagatttacacttaaataa  5547400                         --------->AHL20(2)                                                         <                         <---------AHL20(2)                                                       ---                         --------->ATHB51                                                    <-------                         <---------ICU4                                                      ========                         <--------HAHB4                                     <----------DOF2 ---------        <---------CCA1(2)-------->ATHB1                                     --------->TOE2(3)------>ZmHOX2a(1)     ------>ZmHOX2a(1)  <---------ATHB51                                 ------->TEIL       --------- <-----------GT1        <---------ATHB12     --------->YAB1             <---------CCA1(2) <---------YAB1 ---->AHL20(1)          --------->ICU4      <---------YAB1     --------->At5g28300  --------->AHL20(2) --->AHL20(2)   <---------AHL20(2)<---------ARR11(3)          ----------->GT1       <---------AHL20(2) --->YAB1      --------->AHL20(2) --------->ARR11(3)          <---------DEAR3(2)    --------->AHL20(1) ---AHL20(2)<----------DOF2  <---------AHL20(2)              --------->ETT(1)      --------->AHL20(2)   tattatcctcacatcttttaaattcaattatttcattatcttggttatcagaactgagttttgtcggtaacattgtatctttaaaaaaaattatcctaaa  5547500    --------->ANAC58                                               --------->YAB1    --------->ANAC58                                              ----------->GT1  --------->MYB52(1)                           <---------ICU4    <---------TOE1(3) ---------MYB52(2)                          --------->TOE2(3)    <---------TOE2(3)     --------->YAB1 ------->DOF2                   <---------ANAC58         <--------P<------ZmHOX2a(1)  <---------YAB1 --------AGL15                  <---------ANAC58      --------->LBD16              --------------->AGL15 ==================================================================================================MADS_MADS >TOE1(3)               <---------AHL20(2)<---------------------WRI1               <---------------AGL15 >TOE2(3)         ----------->GT1    --------->YAB1  <-----------RAV1(2)      ---------->DOF2   -----   caaagaacgaaacgatacaatagtataaatttgttcttgtcataaacgataatttccaggtaagattaaggataaaacaaaaaagcttataatagcaatt  5547600                          ------------>CBF                         --------->AtMYB61                        --------->ANAC46                   <---------ARR14(2)                   --------->ARR14(2)                --------->SPL7                <---------TOE1(2)              <---------SPL7 --------->ARR14(2)              --------->TOE2(2)                                <---------MYB111(1)            --------------->AtSPL8                             <---------MYB52(2)            <---------------AtSPL3  ---------->ID1            --------->HSFC1(2)    --------->ANAC58 --------->MYB46(3)         --------->TOE2(3)-------->P         <---------HSFB2a(2)    --------->ANAC46====================HOX2a_HOX2a          <-----------ARR10      --------->HSFB2a(2)    --------->ANAC58<------ZmHOX2a(2)    <----------DOF2--------->MYB52(1)      <----------DOF2 ---->AHL20(2)--------->TOE1(2)  ------>ZmHOX2a(1) --------->AHL20(2)<---------MYB52(1)       -------   taaaacacgaattcaacgtacgatccaccacaatcctcgtcgtctttcaaacttaaaataccgaaactacccttaccttcttctttccataagaaatcaa  5547700                                                                 --------->TOE2(3)                                                               <-----------ARR10                      ------->TEIL                             <---------ARR11(3)                     <---------CCA1(2)    <----------DOF2     <---------CCA1(2)            ----------                 <------------CBF   <---------ARR11(3)    --------->ANAC46         --------->YAB1              ------------>CBF      --------->ARR11(3) <---------ARR14(2)      --------->ATHB12       ------>ZmHOX2a(1)*TSS        --------->GLK1(2)  --------->ARR14(2)      <--------HAHB4-------- -->YAB1 <---------AtMYB61         --------->RVE1(1)<---------ANAC46          <---------ATHB12 <-----   aaccaagtcctatggtcgcaattgtatctctatctaaaaatcttctttgaatttgtgtatacacaaatcttattcaacgaatcatttatcaccaaaaggt  5547800                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                          <---------ANAC46                                                                                <-------MYC2                                                                                <-------PIF5                                                                                ------->MYC3                                                                                <-------MYC3                                                                                ------->PIF4                                                                                <-------PIF4                                                                                ------->MYC2                                                                                <-------MYC4                                                                                ------->PIF5                                                                               <---------O2                                                                               <---------TGA1a                                    <---------O2                               --------->TGA1a  <----                                    <---------TGA1a                            --------->O2    <-----                                    --------->TGA1a                            --------->ANAC55(2)                                    --------->O2                               <---------ANAC55(2)                         <---------ANAC58                                     ------->TEIL>>>>>>>>CAMTA3                         <---------ANAC46                                     ------------>OsbHLH66 <                         <---------ANAC58                                  --------->ANAC58    <-----   ===========================================bZIP_DOF                     --------->ANAC46------->MYC3   <----------DOF2   <---------ANAC58                                      --------->ANAC58<-------MYC3 >DOF2               <---------ANAC58   <---------DEAR3(2)       --------->ZAT18------->MYC4--------- ->DAG2              <---------ANAC46  <---------DEAR3(1)<<<<<<<<<<<<<<<<<LFY<---------ALFIN1  ------ ----GLK1(2)--------->MYB52(2)<---------WOX13(1)         ----------->RAV1(1) <------------OsbHLH66 --   tctctcttttttgtttgtttctgtcttgtgtgaatgactcgtcggtgttcgcattgtagcaacaatgggcacaattcacgcacgtgtccaacgcgtggtg  5547900          --------->ALFIN1       <---------DEAR3(1)     --------->ALFIN1    ------->MYC2    ------->MYC3    <-------MYC3    <-------PIF4    <-------MYC2               --------->ALFIN1    ------->MYC4               <---------AtMYB61    <-------MYC4              <------ZmHOX2a(1)    ------->PIF4            --------->ALFIN1     <---------ARR14(2)     ----------->GT1    <-------PIF5     --------->ATERF1(1)--------->ALFIN1             <---------MYB52(1)    ------->PIF5     <------NtERF2--------->ALFIN1                  --------->LBD16        <---------DOF5.7(2)   <---------TGA1a  --------->LBD16     <---------ANAC46         ------>NtERF2             --------->MYB52(1)   --------->TGA1a <---------DEAR3(1)<---------AtMYB61           --------->LBD16          <---------WRKY12  ------------>OsbHLH66    <------ZmHOX2a(1)     --------->ARR14(2)<---------ANAC46      --------->DOF5.7(2) <------------OsbHLH66--------->ALFIN1<---------MYB46(3)        --------->DEAR3(1)<---------ANAC58 -----MYB46(3)     <---------ANAC46  <---------DEAR3(1)         --------->ANAC46  <---------ANAC58 ----AtMYB61       <---------ANAC58  --------->ALFIN1        <---------ALFIN1   <------MYB46(1) ------NtERF2      <---------ANAC58<---------MYB46(3)      ------>ZmHOX2a(1)    <---------ANAC46 ----DEAR3(1)     <---------LBD16 <---------AtMYB61    <---------ARR14(2)       <---------ANAC58 >ALFIN1<---------ANAC46 --------->ALFIN1     --------->ALFIN1<---------ATERF1(1) <---------ANAC46 --->ALFIN1     --------->ALFIN1  <---------DEAR3(1)   --------->ARR14(2)       <------MYB83 --------------->PIF3(1)<------ZmHOX2a(1)    <------ZmHOX2a(1)------>ZmHOX2a(1) <---------ANAC58   gtggcacgtgcggtggaagtggcggaggaggaggaggtggtggtggaggagggtctggttcctcctccgccgtgaagttatttggtgtgaggttaacgga  5548000                                                                <------NtERF2                                                                --------->ATERF1(1)                                                               ------>NtERF2                                                               <---------ATERF1(1)                                                               <---------RAP2.3(1)                                                               --------->RAP2.6(2)                                                              <---------ANAC46                                                              --------->ATERF1(2)                                                              <---------ATERF1(2)                                                             <---------At4g35610                                                             --------->ATERF1(1)                                                             <------NtERF2                                                             --------->DREB2C(1)                                                             <---------ABI4(1)                                                             --------->At4g35610                                                             --------->RAP2.3(1)                                                             <---------DREB2C(1)                                                            <---------ORA47(2)                                                            <---------ATERF1(1)                                                            <---------RAP2.3(1)                                                            <---------RAP2.6(1)                                                            <---------ERF1                                                            <---------RRTF1(1)                                                            ------>NtERF2                                                            <---------DEAR4(2)                                                           <---------ATERF1(2)                                                           <---------RRTF1(2)                                                           <---------RAP2.6(2)                                                           <---------RRTF1(3)                                                           <---------RAP2.3(2)                                                           --------->ALFIN1                                                           <---------RAP2.3(3)                                                           <---------DEAR3(1)                                                           --------->ATERF1(2)                                                           --------->DEAR3(1)                                                           <---------ANAC46                                                          --------->At4g35610                                                          <---------At4g35610                                                          <---------ABI4(1)                                                          --------->RAP2.3(1)                                                          --------->DEAR4(2)                                                          --------->DREB2C(1)                                                          <------NtERF2                                                          --------->ATERF1(1)                                                         <---------RAP2.6(1)                                                         <---------RAP2.3(1)                                                         <---------ATERF1(1)                                                         <---------RRTF1(1)                                                         <---------DEAR4(2)                                                         <---------ORA47(2)                                                         <---------ERF1                                                         ------>NtERF2                                                        <---------ATERF1(2)                                                        <---------RAP2.3(3)                                                        <---------ANAC46                                                        <---------RRTF1(3)                                                        <---------DEAR3(1)                                                        --------->DEAR3(1)                                                        --------->ATERF1(2)                                                        --------->ALFIN1                                                        <---------RRTF1(2)                                                        <---------RAP2.3(2)                                                        <---------RAP2.6(2)                                                       <------NtERF2                                                       ------>NtERF2                                                       <---------ABI4(1)                                                       --------->ATERF1(1)                                                      <---------RRTF1(1)                                                      <---------ERF1                                                      <---------RAP2.3(1)                                                      <---------ATERF1(1)                                                     <---------RRTF1(3)       <---------MYB52(1)                                                     <---------ANAC58 --------->ANAC46                                                     <---------ANAC58================================                                                     <---------RAP2.3(3) --------->AtMYB61                                                     <---------RRTF1(2)  <---------ALFIN1                    <---------ANAC58                 <---------RAP2.6(2) --------->DEAR3(1)                  --------->ALFIN1                   <---------DEAR3(1)------->TEIL            ---------->DOF2                          <---------ANAC46------->GAMYB              -----          <---------AHL20(2)                        <---------LBD16 --------->ANAC58            -----         --------->AHL20(2)                      <-------GAMYB<---------DEAR3(1)<---------CCA1(2)        <---------YAB1     ----------->GT1      <---------MYB46(3)  <---------MYB52(2)  <---------MYB52(1)      <--------HAHB4----------------->AGL1      <-----------RAV1(1) --------->ANAC58   <-----------HVH21     --------->ICU4 <---------ANAC58    <------NtERF2<---------RAP2.3(2)--------->MYB46(3)<---------ATERF1(1)   tggctcgattattaaaaagagtgcgagtatgggtaatctctcggcattggctgttgcggcggcggcggcaacgcaccaccgtttatctccgtcgtctcct  5548100            --------->YAB1            --------->TOE2(3)         <---------CCA1(2)     <-----------HVH21    --------->bZIP60(2)    <---------O2  <--------ATHB1    --------->TGA1a    <---------bZIP60(1)    ==============================MYC_MYB    --------->O2  -------->HAHB4    <---------ANAC46    <---------TGA1a          <---------DOF5.7(2)    --------->bZIP60(1)    <---------MYB52(1)                                             <---------At4g35610   <------NtERF2  --------->ATHB12                                                       ------>ZmHOX2a(1)  ------>NtERF2   <---------ICU4            --------->ARR14(2)                         ------>ZmHOX2a(2)  <---------ATERF1(1)      --------->DOF5.7(2)                        ----------->GT1<---------ARR11(3) <---------ETT(2)<---------ATHB12           <---------GLK1(2)  <---------ICU4        --------->ARR11(3) =============MYC_MYB     <-------GAMYB     <---------ARR14(2)<---------YAB1         <---------ARR14(2) ->ZmHOX2a(1)    --------->ICU4           --------->ANAC46    --------->ICU4       <---------YAB1 ------>RAV1(2)  <---------YAB1    <------ZmHOX2a(2)        --------->YAB1    <---------At4g35610   ctggcgacgtcaaatcttaatgattcgccgttatcggatcatgcccgatactctaatttgcatcataatgaagggtatttatctgatgatcctgctcatg  5548200  Previous    Next  AGI:  At3g16350.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G47390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45826.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 5547724    to: 5549666    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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