Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------HSFB2a(2)                                                                          <---------AHL20(2)                                                                         --------->AHL20(2)   --------->ATHB12                     <---------At5g28300          --------->ICU4    --------->HSFB2a(2)  <---------AHL20(2)       --------->LBD16   --------->ARR14(2)  <-------TEIL          -------------- -->DAG2             <-------TEIL      <-----------GT1        --------->At4g35610      <------------- -->DOF2    ----------->RAV1(1)   <---------TOE2(3)           --------->CCA1(2)       ---------------   ctaagtaattggagcaacaagagtacatccgagattgagatttaccatatatacagacacagagagatgcaacgattaaatatggtgttccaaaaaatgc  4174800                       --------->TOE2(3)                                                  ---------->DOF2                       --------->TOE1(3)                 <---------ANAC55(2)           --------->ANAC58               ------->MYC3                              <---------ANAC46              --------->ANAC58               <-------MYC3                              --------->ANAC55(2)           --------->ANAC46            <---------ALFIN1                             --------->ANAC58            ---------->DOF2          ------>NtERF2<----------DOF2                   --------->ANAC58           --------->ARR14(2)          <---------RAP2.6(3)                            --------->ANAC46           <---------GLK1(2)         <---------ETT(1)                             --------->ARR14(2)            <---------ARR14(2) ->AGL15 --------->ANAC46                             <---------ARR14(2)       <------ZmHOX2a(1) --AGL15 --------->At1g77200                      <-----------RAV1(2)    <-----------RAV1(2) -->AGL3 <---------ATERF1(2)             <------ZmHOX2a(1)  ---------->DOF2 <------ZmHOX2a(1)    ----   aaaacgagttgccgacacatggaaactttaaaactcgaacagaggaatcaaatcaggttacgcaaagacacgattacaggaggacagaaacgcaaagaga  4174900                                                                                                 <---                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                       --------->WOX13(1)       --------->AHL20(1)              <---------------AGL15              --------->ANAC58               --------->AHL20(2)        --------->AHL20(2)                       --------->ANAC58               <---------AHL20(2)        <---------AHL20(2)                      <---------------------WRI1      <---------AHL20(1)       --------->AHL20(2)                   <---------------AtSPL3        --------->ANAC58   <-------  ----------->GT1                 ----------->HVH21  <---------ATHB12     --------->ANAC58<---------AHL20(2) <---------TOE2(3)     <---------GLK1(2)    --------------->AtSPL3      ---------->DOF2  --------->AHL20(2) ----->CCA1(2)--------------->AGL15         <---------------AtSPL8    --------->YAB1 <---------AHL20(2)   aatgaggtattaaattctaaattcagaatgttgagactgacaagtagtagtacgaatcattcacagagaaaatcaaaagcaatttatttgattttatatt  4175000                                                --------->DAG2                                           <---------YAB1           <---------ANAC58                                         <------ZmHOX2a(1)          <---------ANAC58                --------->ATHB12  --------->TOE1(2)                <---------ICU4     <---------YAB1             --------->ARR14(2)         <----------DOF2  <---------AHL20(2)            <---------ARR14(2)     <-----------GT1                         <----- ------AHL20(2)<---------YAB1   ------->TEIL--------->YAB1<---------DAG2               ----------->GT1 --YAB1---------->DOF2     --------->MYB52(1)  ---------->DOF2--------->AHL20(2)    <---------ATHB12   tgattttatcaaagggcatgatagaatagaaacggacctgagaggatgataaagtcttcacctttttaatacttgctgcataacaaatgaagaaaaaact  4175100                                                                  >>>>>>>>>TBF1      ---------->DOF2                                                           ---------->DOF2       ----------->GT1                                                       ------------------------>ANAC81 <---------TOE2(3)                           ---------->DOF2             --------->ANAC58       --------->ALFIN1              --------->ZAT2    --------->CCA1(2)      --------->ANAC58     --------->CCA1(2)<------ZmHOX2a(1) ----MYB52(2) --------->At4g35610    ----------->GT1 ---------->DOF2 >>>>>>>>>TBF1<-------GAMYB   aacatttgagaaaacaagctgaatcccatcaaagagatgaagttaattcgaatgagaaagcaaaagaagaagaagaagagatggggttaaaggaaggaga  4175200                                                     <------MYB83                                                     <------MYB46(1)                                                   <---------WOX13(1)                                                  <------------CBF                                               <---------WOX13(1)                                          <----------DOF2                                     <---------MYB52(1)                                   <---------ZAT6--------->ATHB12                               --------->ZAT14 <----------DOF2                      <------NtERF2<-----------RAV1(1)                        <---------ANAC58                     ------>NtERF2*TSS   <---------ANAC58                     <---------ANAC58     --           --------->ANAC46    --------->ZAT18<---------ANAC58             <----------DOF2    <------           --------->ANAC58    <---------ZAT14<---------ANAC58        ------->TEIL      <---------MYB55(2)           --------->ANAC58 --------->ALFIN1  <---------AtLEC2    <---------ANAC58      --------->MYB46(3)  --------->ARR11(3)--------->DEAR3(1)   <---------ANAC58         <---------ANAC58   <---------ALFIN1   cggagatttcgctacgaaatcgccgtcgaagtgtgtactgttggctttgcttgattggtctccgtcttgctggacctctttcttgttccacccgctcttt  4175300                                                                          ----------->RAV1(1)   <----                      ------------>CBF          <---------TOE2(2) <---------ANAC58            <------             --------->ANAC55(2)             --------->TGA1a      <---------ANAC58       --------->AHL20(2)             --------->ANAC58                <---------O2      ------->MYC2              <---------AHL20(1)             --------->ANAC46                <---------TGA1a   ------->PIF5         <---------AHL20(1)             --------->ANAC58                --------->O2      <-------PIF5         --------->AHL20(1)            <---------LBD16                  --------->ANAC58  <-------MYC2         --------->AHL20(2)           --------->MYB52(1)   <---------MYB46(3)             <-------MYC3         <---------AHL20(2)     --------->At5g28300        --------->MYB52(2)<------ZmHOX2a(1)    <-----------GT1   <---------AHL20(2) ---->ZmHOX2a(1) ------------>CBF            --------->ANAC58  ------->MYC3    --------->AHL20(2) --- ----DOF2<---------MYB52(2)   <---------MYB52(1)<---------TOE1(2)<---------TOE1(2) --------->AHL20(2)   cctcgactgtaactcacggaccaattcaatccgttagttcatttgccacgtaggattcaagtgctcgtgcgttttgccacataaattttattttatttta  4175400                                                                <---------ICU4                                                                -------->ATHB1                                                                --------->ATHB12                                                                --------->ATHB51                                                               <---------AHL20(2)                                                               --------->AHL20(2)                                                               --------->ICU4                                                               <---------ATHB51                                                             ------>MYB83                                                             ------>MYB46(1)                                                           ------->GAMYB                                                           <---------MYB59                                                        --------->WOX13(1)                                                       <---------WRKY12        <----------CDC5                                <---------WRKY45      --------->ANAC58                <-----------GT1  <---------WRKY38(1)      --------->ANAC58                --------->YAB1  <<<<<<<<<<WRKY6 --------->bZIP60(1)    --------->ARR14(2)            --------->WRKY18(1)                    <------- -------GT1 --------->At4g35610    <---------ICU4     <<<<<<<<<<WRKY11                    <---------- ---AHL20(2)<---------At4g35610   ------>ZmHOX2a(1)  <-----------HVH21                    ----------- ------>ETT(2)          <---------ARR14(2)       ----------->RAV1(2)               --------->ZAT14   tcgacatcacgcttagctctctctcgtattctcttcctaatcacatttcatacctggtcaaccaaattattggttttaaaaaaactatactacttctttg  4175500               <---------RVE1(1)              --------->ARR11(3)              <---------ARR14(2)              <---------ARR11(3)  --------->YAB1              ------>ZmHOX2a(2)       --------->CCA1(2)          <---------ICU4        --------->ANAC55(2)  <---------YAB1 <---------AHL20(2) <---------YAB1  <---------YAB1 ---DOF2      --------->ARR14(2)  --------->ATHB12--------->AHL20(2)                             <--- -----AGL15  <------ZmHOX2a(1)   <---------YAB1   --------->ATHB51                            <------ ---->AGL15<---------TOE2(3)   --------->YAB1     <---------AHL20(2)                  <----------DOF2   ggttatgagatttgaggatttttttaaaatcatttatcattgttgattcgaattatttatgtgatcgatactagtagtacttcgtaagctttgttttttc  4175600                                                                <---------------AGL15                                                                <----------DOF2                                                             <---------ARR11(3)                                                             --------->ARR11(3)                     -        <---------ANAC46             <----------DOF2        <---------CCA1(2)                       <       <---------------AtSPL8        <---------DAG2  <---------YAB1    ----------->GT1          <---- -------DOF2           <---------ZAT18            <---------MYB52(1)<-----------RAV1(1)         ----- -----GT1  <-------TEIL--------->ZAT18    <----------DOF2   <---------GLK1(1)        ----------->HVH21   ttttccaatggagtacatactattgtgaactattctctgcttttctttttcagttagtattgatatctttatgttgtaagaaaaatcgtgacacaattac  4175700  Previous    Next  AGI:  At3g13040.1    Description:  myb family transcription factor. similar to PHR1 (PHOSPHATE STARVATION RESPONSE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT4G28610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41770.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 4172149    to: 4175234    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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