Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC58                                                               <---------ALFIN1        <------NtERF2                                                              --------->At4g35610    --------->ALFIN1                                                           <---------At4g35610     <---------ZAT2                                                     <------NtERF2 --------->LBD16 --------->ZAT2                                                    <---------RAP2.3(1)       --------->ANAC58                                                    <---------ATERF1(1)       <---------ALFIN1                                                   <---------RAP2.3(3)        --------->ANAC58                                                   <---------RAP2.3(2)      <---------ALFIN1                                                   <---------DEAR3(1)   --------->MYB46(3) --------->ANAC58                       <---------ANAC58         ----------->HVH21 <---------LBD16  --------->O2             <-----------HVH21   <-----------RAV1(2)------>NtERF2<---------LBD16   <---------O2          -------->P   <---------ANAC46       <---------ANAC58<---------ABI4(2)  <-----------RAV1(2) ---------->DOF2     --------->ALFIN1      --------->ALFIN1--------->At4g35610--------->ANAC46 ---->GT1 ------>MYB46(1)  ----------->HVH21  <---------ANAC58--------->ZAT2--------->AtMYB61      -- ->MYB59<---------MYB59<---------ANAC58<------ZmHOX2a(1)<------NtERF2 <---------ARR14(2)   --------->ANAC46 --TOE2(3)------>MYB83<-------TEIL  <------ZmHOX2a(1)<---------LBD16  --------->ARR14(2)   --------->AtLEC2   aaacaaagagcctaccttcagaggtgcgtttgacaccaggaggaagtggctcgacggcggaagcagcaccgggaacctccacaccaggtggccaagcaac  4028700                        --------->ANAC58                        --------->ANAC58                      --------->ARR14(1)                      --------->CCA1(2)                     <---------ARR14(2)                     --------->ARR11(1)                     --------->ARR14(2)              --------->At4g35610              <---------ZAT2              --------->ZAT2                    --------->MYB59              <---------At4g35610           <---------ZAT6              ----------->RAV1(2)         <---------ANAC46<---------------AtSPL8            <-----------RAV1(2)          <------NtERF2  --------->YAB1           <---------At4g35610           <---------MYB52(1)     --------->At4g35610<----------ID1  ------>NtERF2   -------->HAHB4     <---------At4g35610--------->ANAC46<---------RAP2.6(3)   <-------TEIL ------>ZmHOX2a(1)  <------ZmHOX2a(1)  <---------ANAC46--------->ICU4 <------ZmHOX2a(1) --------->RAV1(2)<---------TOE2(3)  ------>NtERF2     <---------ATHB12                   --------->LBD16   ttcctgatgctgaagcagctgaggatacgccaaatgcgatgccgtcgtgttaggcaaatgatggtacatagaggaagacgatgcaagagtccctgaatag  4028800                                                    --------->ANAC58                                                --------->LBD16                                               <---------HSFB2a(2)                                               --------->ANAC46                                               --------->HSFB2a(2)                                              <---------LBD16                                            --------->ARR14(2)                 <-----------HVH21          <---------ARR14(2)                --------->WOX13(1)         <---------GLK1(1)            <-----------------------TaNAC69(2)               ------>ZmHOX2a(2)           --------->GLK1(1)          --------->ARR14(2)               <-------TEIL           <---------ANAC46         <---------ZAT2              <------ZmHOX2a(2)       <---------ANAC55(1)      <---------At4g35610             --------->ARR14(2)       <---------ANAC58         --------->At4g35610             <---------ARR14(2)       <---------O2  --------->ANAC58  <---------ARR14(2)            <         <---------LBD16              <---------ANAC55(2)    <---------WRKY38(1)              <------      <---------HSFC1(2)              <---------ANAC58 --------->MYB52(1)                    <-------      --------->HSFC1(2)              --------->ANAC55(2)  <-----------HVH21             --------->MYB52(1)   ---------->DOF2                   <-------TEIL ---------->DOF2 --------->At4g35610---------->DOF2-   ttgctcaaagcttcggatccatcacgagctaagaaacgatacgtggtatccggaaagtaatggtcagcagaagaaccgtagagagaagaaagaccggttt  4028900                   <---------DEAR3(1)                  <---------At4g35610                  <------NtERF2                  --------->ATERF1(1)                  ------>NtERF2                  <---------LBD16                 <---------RRTF1(1)                 <---------RAP2.3(1)                <---------ANAC58                <---------RAP2.6(2)                <---------RRTF1(2)                <---------ANAC58                <---------RRTF1(3)                <---------DEAR3(1)            <-------GAMYB           <-----------RAV1(1)           <---------MYB46(3)           --------->MYB111(2)           --------->MYB52(2)           --------->MYB111(1)        --------->MYB55(2)                           --------->ZAT2        <---------MYB46(3)   <---------At4g35610     <---------At4g35610       <---------AtMYB61     <---------ZAT2       <---------At4g35610       --------->ALFIN1      --------->ZAT2       --------->At4g35610   --------->ATERF1(1)      --------->ARR14(2)    --------->ZAT2   <------NtERF2<---------RAP2.3(3)  --------->ARR14(1)  <---------ERF1<---------RAP2.3(2)  --------->CCA1(2)  ------>NtERF2 <---------ANAC46    --------->ARR14(2)  <---------RAP2.3(1)       <---------ARR14(2)    <---------ZAT2 <---------RAP2.3(3)       <------ZmHOX2a(1)   --------->ATERF1(1) --------->ATERF1(2)     --------->ALFIN1      <------NtERF2 <---------RAP2.3(2)    <------ZmHOX2a(1)  <---------MYB46(3) <---------DEAR3(1)<---------ANAC46 <---------ARR14(2)  --------->At4g35610 <---------RAP2.6(2)  --------->ALFIN1<-------TEIL<------NtERF2 <---------ATERF1(2) --------->ATERF1(1)  --------->ALFIN1 ---------LBD16<---------LBD16      --------->ARR11(1) ----------->RAV1(1)               ----------->HVH21 ----DOF2 <--------P <------NtERF2----------->ARR10  --------->At4g35610     <------NtERF2 --MYB52(1)--------->MYB55(2)--------->At4g35610 ----------->RAV1(1)       <---------ANAC58 -------->RAP2.6(3)--------->ALFIN1<---------GLK1(1)----------->RAV1(1)    <---------ANAC58<---------TOE2(3)   ttggcggcagtggttgttgcggcggaggaggagctggagatacggtggaggcagcagcagcataagaaggttgaagggcgtagctatacaattgacgatg  4029000                                                                                                  ---                                                                                                  ---                                                                                                -----                                --------->DAG2                                                  -----                        ---------->DOF2                                                        <-----                        --------->MYB52(1)                                                     ------                     --------->TOE1(3)                                                         <-----                     --------->TOE2(3)     <----------DOF2                   <---------ANAC46 -------                  <---------GLK1(1)     <-----------GT1             <---------YAB1            -------                  --------->GLK1(1) <----------DOF2               --------->YAB1      <---------ANAC46             --------->DAG2    ---------->DOF2      <-----------HVH21        <---------YAB1   -------            ---------->DOF2<----------ID1  <---------DAG2        <---------YAB1  <-----------RAV1(1)   tgccattcgatcgaaaaaggaaaccctaaaggaaaaagctttctacttttttggtgtcaaacaaattatcaaaattgttgtgtttgtggggtttacaacc  4029100     --------->YAB1 --->MYB46(1) --->MYB83                                                                                    <------ ---->AtMYB61                                                                           <---------GLK1(2) -->GAMYB                <-------TEIL                                                 --------->AHL20(2) ----MYB55(2)           <------ZmHOX2a(2)                                             <---------AHL20(2) --->MYB46(3)          --------->ARR14(2)                         <------------CBF   <---------AHL20(2) ----MYB52(2)          <---------ARR14(2)        --------->ZAT6 <---------AHL20(2)   --------->AHL20(2) -->ANAC58             --------->AGP1          *TSS   <---------GLK1(2)             <---------YAB1 -->ANAC58            --------->At4g35610<-----------GT1       <----------DOF2   --------->ICU4 -->ANAC46     <---------GLK1(2)    --------->ATHB12<---------ATHB12             <---------YAB1   <--   aactcaaacagaacaaaaattctcagatccataaaacttgatttgacattaccactgattctctgttttattgcagtttgcacattattaaattctcttt  4029200                                 --------->DAG2                                ---------->DOF2                            <---------YAB1                                                        <--                           <-----------TBP                                                        ---                   --------->AHL20(1)                   --------->LBD16                    ----------                   <---------AHL20(1)            <-----------GT1                        ------>MYB83                   --------->ARR11(3)       <----------DOF2              --------->At5g28300     ---- ----DOF2         --------->AHL20(2)        <---------DAG2  <---------KAN4(2)      --------->MYB52(1) --------DOF2   --------->AHL20(2)        <---------At4g35610           ----------->GT1 ------>MYB46(1)   ctttcttatcaacacaaaaaatatatagtttttataaagttgggagcttttttacatcagggaataaacactgagggtaactaagaaaccgaacaaagcc  4029300                                                                           <-----------HVH21                                                                          --------->bZIP60(1)                                                                     <---------At4g35610                                                                 ------>ZmHOX2a(2)            <------                          ------>ZmHOX2a(1)                   --------->ZAT14 ---------->DOF2 ------- -----PIF5             ---------->ID1                    ------>ZmHOX2a(1)<---------bZIP60(1)<-------TEIL ---->PIF5     <---------ZAT14                ==========================HOX2a_HOX2a         --------- >DOF2         --------->ZAT14 <---------GLK1(2)         ===============HOX2a_HOX2a        <---------GLK1(2) ------->RAV1(2)      --------->ZAT18         <------ZmHOX2a(1) --------->GLK1(1)  <----------DOF2   cctgctatgacttcaacttcagtgtgtcctattgattctttcaatggaggagcaatctcctcactgatctcttctgatgtcaaagctttgttagattcgt  4029400                                                                                                 <---                                                    <---------ALFIN1                          -------  <----------DOF2                        --------->MYB52(2)                               --------->ZAT14  ----------------------->TaNAC69(2)   <---------MYB52(1)                                 <---------ZAT14 ---MYB46(3)                         <---------MYB46(3)     <---------ANAC58           ----------->RAV1(2) -->MYB52(2)     <---------ZAT14   <---------At4g35610      <---------ANAC58      <---------ALFIN1 >ARR14(1)<---------ICU4           --------->At4g35610 <----------DOF2           ------>ZmHOX2a(1)   tgccctttaaactcattacttcacttctacgagcattagctgttagtttgttcaacactttggcatgttttccaacttctctcctcaccccctgcaatgt  4029500                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                          ------>MYB46(1)                                                          ------>MYB83                                                         ----------->RAV1(1)                                                        ------->GAMYB  <---------ATHB12    --------->ZAT6               <---------KAN4(2)          --------->ANAC58 --------GT1    <---------YAB1             --------->GLK1(2)---------->DOF2   --------->ANAC58 ---->GT1       <---------TOE2(3)      --------->YAB1  --------->MYB46(3)   ---------->DOF2<---------   tacaatcagtgagacattaagataacactagaatcagacattgagaatttgagaataaccaacaaagacctattgaacaaaagccagcctaagcttttct  4029600  Previous    Next  AGI:  At3g12680.1    Description:  HUA1 (ENHANCER OF AG-4 1). similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT2G47850.1); similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT2G47850.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO64978.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 4025083    to: 4029147    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g12685.1    Description:  similar to catalytic [Arabidopsis thaliana] (TAIR:AT1G24350.1); similar to unknown [Populus trichocarpa] (GB:ABK94924.1); contains InterPro domain Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832) Range:  from: 4029190    to: 4030362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version