Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->YAB1                    <---------YAB1      <---------YAB1                   <---------ICU4                                               -      --------->ICU4                  <---------ATHB12                                          <----    --------->YAB1              ----------->GT1       --------->YAB1                    --------->ARR11(3) ---GT1<---------ICU4        --------->TOE2(3)   <----------DOF2                        <---------ARR11(3)   accgagtcatcataacttatacactgatcaacattagtaaatcattcttctctttatcttgatcagtgtcttaatcaaagattagtagtagattttagtt  3369200                                                <---------ATHB12                                               --------->ANAC58      ------>MYB83                                               --------->ANAC58      ------>MYB46(1)                                              --------->WOX13(1)   --------->AtMYB61       <-------TEIL                                          --------->DAG2     <------ZmHOX2a(2)         <---------TOE1(3)                                        ---------->DOF2    <------ZmHOX2a(1)          <-----------RAV1(2)        <----------DOF2            --------->AHL20(2)  ---------->DOF2    --------->At4g35610 -------->YAB1                     --------->YAB1--------->YAB1  >>>>>>>>>>MYB80 --------->ALFIN1 -----AHL20(2)                    <---------ATHB12 ---------->DOF2 <---------MYB59<---------MYB46(3)   tattagaatactttccattttggagtctcacatccaattaaaaaaaggcaatcaaaagaaaggatcaaaccaaaccagttgaagtggttcaggttcactt  3369300                        >>>>>>>>>E2Fd                        <------NtERF2                        >>>>>>>>>E2Fc                       ------>NtERF2                      --------->ANAC58                      --------->ANAC46                                                              -                     <-------MYC3                                                                   <                     ------->MYC3                                                                  --                     ------->MYC2                                                                ----                     <-------MYC2                                                              ------                    --------->ANAC46                   --------->ATHB12                        ------                    --------->ANAC58    <-------GAMYB --------->ICU4                          -------                    --------->ANAC58    <-----------HVH21                                ----------->GT1                  <---------ALFIN1     <---------MYB46(3)                            <---------AHL20(2)            <---------ZAT18            <---------DEAR3(2)    <---------GLK1(1)      <---------AHL20(1)            --------->ZAT18---------->DOF2            <---------YAB1                --------->AHL20(2)       ---------->DOF2--------->ANAC58<---------DEAR3(1) <---------WOX13(1)         <---------AHL20(2)   catcgattctaaagtggacaacacgcgccaaaagttatcgtcggtcgagtcttgacatgattgaaatctcccaaaaaactatgtaataaaattgaaaaat  3369400                                  --------->DAG2                                  --------------->AtSPL3                                  --------------->AtSPL8                                  <---------------AtSPL8                                 ---------->DOF2                              <------MYB46(1)                              ----------->GT1       --------->GLK1(1)      <------MYB83   --------->YAB1            --------->MYB59           <---------TOE2(3) -------->YAB1            --------->ARR14(2)          ---------->DOF2        --------->ANAC58 ---------ICU4            --------->ARR11(1)         <---------AHL20(2)      --------->ANAC58 ------->ICU4             <---------ARR14(2)     --------->AHL20(2)--------->At4g35610 ----->YAB1             ----------->ARR10     --------->YAB1     --------->DAG2                    -- --->AHL20(2)    <---------AHL20(2)          <---------YAB1     ---------->DOF2     xxxxxxxxxxxxxxxxx --->AHL20(1)    --------->AHL20(1)        --------->YAB1--------->ATHB12   --------->ZAT18       --- -->YAB1         --------->AHL20(2)   --------->ZAT14--------->AHL20(2)     ------------------------>ANAC81   aataatcagaactctcaaataaaatgtagatttggtaaagtactctcatcataaattaaagattgaaaaagctgagagtacccaaaaaaaaaaaaaaaaa  3369500           <---------ALFIN1         --------->CCA1(2)         <------ZmHOX2a(2)                                       --------->ARR14(2)        <---------ARR11(3)                                      <---------MYB52(1)        --------->ARR11(3)                                    <---------ANAC58        --------->AGP1                                        <---------ANAC58                    ---        <---------ARR14(2)               <---------ICU4    --------->GLK1(2)         *TSS------>ZmHOX2a(1)        --------->ARR14(2)               --------->YAB1   <---------GLK1(2)        ------>ZmHOX2a(1)    ---------->DOF2                     <---------ATHB12  --------->ARR14(2)    ---------->ID1    --- ------->DAG2   --------->TOE1(1)     --------->WOX13(1)  <---------ARR14(2)    <-----------GT1------ xxx>smallRNA(le3)              <----------DOF2          <---------At4g35610<---------DAG2     ------ ------->DOF2  --------->HSFB2a(2)  ------------>CBF     --------->At4g35610<----------DOF2    ------   aaaagctaaagatccacctcgaacttctctccatctttctcaatcatcatctaattctcagattccgtttccttcttcctttttcctcttcctcttcaag  3369600                                                                                                   <-                                                                    <----------DOF2                --                                                          ----------->GT1                          --        --------->YAB1      <-----------GT1          ==================================HOX2a_HOX2a -- ---------->DOF2       <----------DOF2               --------->LBD16================================= -------->RAV1(1)     <---------DAG2                 ------>ZmHOX2a(1)                  <---------ANAC58 ------>RAP2.6(2)     --------->TOE2(3)            <---------LBD16  <---------DAG2      <---------ANAC46 --->ANAC46         -------->P             <---------AHL20(2)  --------->KAN4(2)        <---------ANAC58 --->ANAC58         ------>MYB83     ------>ZmHOX2a(1)  ---------->DOF2               --------------- --->ANAC58         ------>MYB46(1)XXXXXXXXXXXXXXXXXXXXX>MIR4221<-----------GT1 <------ZmHOX2a(2)  ==   ccacaaagactcataaaaatccaacctttttctcatttcctctgttaaatttttcctgaaaagtttattcctttttctacagatcgaatttcgtagttct  3369700             <---------MYB52(1)        --------->GLK1(2)        ------->TEIL        <---------ARR14(2)        --------->ARR14(2)       <---------GLK1(2) <---------ZAT14 --------->ZAT14 --------At4g35610 ------->ANAC46 ------->TGA1a                   --------->ARR11(3) ------->At4g35610               <---------ARR11(3)                                               <-- ========bZIP_DOF<----------DOF2<---------CCA1(2)                                             ------>ZmHOX2a(1) -------->TaNAC69(2)         --------->TOE2(3)          <---------ANAC46               <-----------GT1 ===========================bZIP_DOF                    ----------->GT1             <----------DOF2   cacctcactgaatctgttactttctctataatctaaatcttcaaaaatgtttctggttttgtgaaatcaacacttaaaaactcgagcttttacctcctct  3369800                                                          <---------ARR14(2)               --------->YAB1                                                          --------->ARR14(2)               <---------                                                       >>>>>>>>>TBF1                     <---------ARR11(3)        --------->YAB1                   --------->ANAC58 --------->ARR11(3)      --------->ANAC58 -------MYB52(1)                         --------->ANAC58 <---------ARR11(3)      --------->ANAC58   gttttttcaaagataaaaatgagagaagacgattcagactggttcgcaagatgggaagaagaacttccatcaccagaagagctcatgccaatatcacaat  3369900                                                          --------->ARR14(2)                                                          <---------GLK1(2)                                                          <---------ARR14(2)                                                       --------->ANAC58                                                       --------->ANAC58                                                     --------->MYB52(1)            --------->YAB1  <-                                                 --------->ANAC55(1)               <---------ICU4----                                                 --------->ANAC55(2)            --------->YAB1-------                                                 <---------ANAC55(2)           <---------YAB1 ------>MYB46(1)                                                 --------->ANAC58            <---------ICU4 ---------                                                 --------->ANAC58            --------->YAB1 ---------                                                 --------->ANAC46       --------->TOE2(3)   <--------                  --------->ZAT6               --------->MYB52(1)     ------>MYB46(1) --------->YAB1             <------ZmHOX2a(2)                <---------ATHB12      --------->AtMYB61 <---------ICU4            <---------ARR14(2)        ------->TEIL  <---------ARR14(2)------>MYB83<---------YAB1-----            --------->ARR14(2)     --------->ANAC46 --------->ARR14(2)-------->P<---------ICU4------>MYB83 --GT1      --------->AGP1     --------->CCA1(2)<---------LBD16    --------->MYB46(3)<---------YAB1--   ctctaatctcacccgatctagctctagccttcgatatacgaaccccaaatcacggaaacggaaactcaaaccaacctcatcatcatcatcatcaccaaac  3370000                                                                               ------>ZmHOX2a(2)                                                                               ====================HOX2a_HOX2a                                                                              <------ZmHOX2a(2)                                                                              =====================HOX2a_HOX2a                                                                              --------->CCA1(2)                                                                             --------->AGP1   -------                                                                             <---------AGP1   <------                                                                             <---------ARR14(2)     -                                                                             --------->ARR11(3)   <--                                                                             --------->ARR14(2)  ----                                                      --------->RAP2.6(2)    <-----------ARR10<------        --------->REM1(1)                           --------->At4g35610  <---------At4g35610  -------        <---------ALFIN1<---------At4g35610         <---------At4g35610  --------->At4g35610 --------      ------>ZmHOX2a(1) --------->At4g35610       <-----------RAV1(2) <-------TEIL          <------ZmHOX2a(1) --------ALFIN1         <---------ZAT2           ====================================HOX2a_HOX2a----- ----->AtMYB61          --------->ZAT2           =====================================HOX2a_HOX2a---- -->ANAC46        --------->ZAT2                 ------>ZmHOX2a(1)  <---------ARR14(2)  --------->LBD16 >AtMYB61         <---------ZAT2                --------->TOE2(3)   --------->ARR14(2) <---------HSFB2a(2) >MYB46(3)  <-----------HVH21                --------->ARR14(2) <---------At4g35610   <---------LBD16 -MYB46(2) --------->DEAR3(1)          --------->ANAC46      --------->At4g35610      <------NtERF2<- ---->MYB46(3)    <---------At4g35610  --------->ANAC58  <---------ARR14(2)  <---------ARR11(3)------ ------->ANAC46   --------->At4g35610  --------->ANAC58  --------->ARR14(2) <---------CCA1(2)<-------   cacacctcctacaccgtctcagcttcagcttccatcttctcaagccaattcctcagccgaattcgctgcagattcagcagatctaggctccggaggagct  3370100  Previous    Next  AGI:  At3g10760.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G05090.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73573.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18236.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 3369585    to: 3371232    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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