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UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                 <---------AHL20(2)
               <---------AHL20(2)
               <---------YAB1                                 --------->YAB1
              --------->YAB1                       <---------MYB46(3)
              <---------AHL20(1)                 --------->At5g28300                      <---------
              --------->AHL20(2)              <---------At5g28300                         --------->ANAC58
    --------->TOE1(3)                         <---------TOE2(3)                           --------->ANAC58
   <---------ANAC46                          --------->MYB52(1)                     <---------TOE1(2)
  <---------TOE2(3)                  ----------->GT1  <---------ZAT6           --------->GLK1(1)
 <---------DOF5.7(2)        <-----------GT1  <---------DOF5.7(2)               <---------GLK1(1)  --
 
tcattaacgtgaaacaatattattttgttatttactagtgaagaaaattaacggtgagtgataaatcagaagtctaaaatggatttctaggttacgacaa  2833000
                                <---------ANAC58
                                <---------ANAC58
                             <----------DOF2
                --------->GLK1(1)        ----------->GT1      <----------DOF2
   --------->AHL20(2)      <---------At4g35610             <-----------GT1
  --------->AHL20(2) <---------TOE1(2) ----------->GT1 <----------DOF2
-ID1    --------->AHL20(2) --------->At4g35610         <---------DAG2   --------->YAB1       -------
------->AHL20(2)<---------GLK1(1)   <---------ANAC46<-----------GT1    <---------YAB1    <----------
 
aaaaaataaaaaaaaatggatttctaggttagctttcttgggtagagaaataagtttacttttcactttcagttttcattatccattgaatgggtcatga  2833100
                                                                       ------>NtERF2
                                                                      --------->ANAC46
                                                                      --------->ANAC58
                                                   --------->ZAT14    --------->ANAC58
                                                   --------->ZAT18   <---------LBD16
                                                   <---------ZAT14  >>>>>>>>>>E2Fb
                                        <---------------AtSPL8   <---------GLK1(1)
                                       ---------->DOF2          ------->TEIL
   ----------->HVH21                  --------->YAB1         --------->ICU4
 ----------------->AGL1              <---------ATHB12    <---------MYB52(1)      ---------->DOF2   -
-->ICU4                          ===================================================================
-HVH21   ----------->GT1         ----------------->AGL3 --------->LBD16--------->LBD16           ---
 
agaggcctgatatggtgaataatgggcttaaataggcccaataaaagtacttagtccaccggtaatgaatttcccgccatagaagaaagtcatcaacttc  2833200
          <----------DOF2
       <---------------AGL15
       <---------ANAC58
       <---------ANAC58
       ==================================================================================MADS_MADS
   ------>ZmHOX2a(2)          --------->ARR11(3)
  <------ZmHOX2a(2)           <---------ARR11(3)
 <---------ARR11(3)           <---------ARR14(2)
 --------->ARR14(2)           --------->ARR14(2)                                ----------->GT1
 --------->ARR14(3)          --------->CCA1(1) <---------WRKY18(1)            <---------TOE1(3)
 <---------ARR14(3)          --------->RVE1(1)--------->WRKY38(1)             <---------TOE2(3)
 --------->ARR11(3)     <---------MYB59       --------->WRKY12           <---------------AGL15
 <-----------ARR10      --------->TOE2(3)     --------->WRKY45          <---------YAB1
 <---------ARR14(2)  <-----------GT1      --------->DAG2                --------->ICU4
---------->ARR10     <<<<<<<<<GT-1        <---------TOE2(3)           --------->MYB52(1)          --
=======================MADS_MADS        ---------->DOF2               <---------DOF5.7(2) --------->AHL20(2)
------>LBD16  --------->ANAC55(2)  --------->LBD16  ---------->DOF2<------ZmHOX2a(1)  ---------->DOF2
 
cgaagatcttccgttttaagtgatttacctaaatatcccccaaaaaaggttgaccaaaagttaagacagaggataacgattaagggtaacaaagtaaatg  2833300
                                                   --------->ANAC58
                                                   --------->ANAC46
                                           --------->LBD16
                                          --------->ANAC46
                                          --------->LBD16
                                     <------ZmHOX2a(2)                                             -
                                    <---------ARR14(2)                                        ------
                                    <---------ARR11(3)                                        ------
                                    --------->ARR14(3)                                      ------>NtERF2
                                    --------->ARR11(3)                                    ----------
                          ----------->GT1 --------->ANAC58   ------->TEIL               --------->ANAC55(2)
                       ---------->DOF2------>ZmHOX2a(2)      <---------ARR14(2)         --------->ANAC46
      <----------ID1  <---------AHL20(2)  --------->ANAC58   --------->ARR14(2)         --------->O2
 --------->YAB1----------->GT1      --------->ARR14(2)       --------->GLK1(2)          --------->ANAC58
<---------ATHB51     --------->AHL20(2)  --------->LBD16     <-----------ARR10          --------->ANAC58
--------->ICU4 --------->YAB1   ---------->DOF2    --------->ANAC58     ---------->DOF2 <---------O2
------->WOX13(1)     <---------AHL20(2) <---------LBD16<---------SPL7 ---------->DOF2<---------REM1(2)
 
gcaattataagggcaaaatagtaattaaaaggaataaaagatcccccgaaacacaagccctacgaatctagtcgaaagagcgagtgtgttcacgcgacct  2833400
                                <------MYB83
                               --------->MYB111(1)
                               <---------MYB46(3)
                               --------->MYB55(2)
                               --------->MYB46(2)
                               --------->MYB111(2)                                       <---------TOE1(2)
                              <---------MYB55(1)                                      ------>ZmHOX2a(2)
                              <--------P                                  <------ZmHOX2a(2)
                             <---------MYB52(1)                          <---------ARR11(3)
                          <---------LBD16                                --------->ARR11(3)  -------
                        --------->ARR14(2)                              --------->GLK1(1)<---------TOE2(2)
   *TSS                 <---------ARR14(2)                            <------NtERF2  <------ZmHOX2a(2)
-------->ANAC46   <---------ZAT6<------MYB46(1)                    <------NtERF2    <---------ARR14(2)
--->TOE2(3)       ----------->GT1                        --------->HSFC1(2)         --------->ARR14(2)
--->AtMYB61     <---------At5g28300                      <---------HSFC1(2)------>ZmHOX2a(2)--------
->HVH21     <----------DOF2 --------->LBD16              <---------At4g35610--------->TOE1(2)<------
 
caacgagactcaacgcttttacagttaaatccggtaggtgagagagagagagagaagggaagcttatggaggcagagatcgtgagacgatcggaggtaac  2833500
                                                              --------->O2
                                                              <---------ANAC46
                                                              <---------O2
                                                              --------->ALFIN1
                                                              <---------TGA1a
                                                              =================================MYC_MYB
                                                           <---------DEAR3(1)
                                                          --------->ATERF1(1)
                                                          <------NtERF2
                                                         <---------RAP2.3(1)
                                                         ------>NtERF2   <---------ARR14(2)
                                                         <---------ERF1----------->ARR10
                                                         <---------ORA47(2)
                      ----------->GT1                   <---------RAP2.3(2)             <---------MYB52(1)
                    --------->GLK1(2)                   <---------RAP2.6(2)           <---------MYB46(3)
                  <---------HSFC1(2)                    --------->ATERF1(2)           --------->MYB55(2)
                  <---------HSFB2a(1)                   <---------RAP2.3(3)           --------->MYB52(2)
           <------MYB46(1)                              <---------ATERF1(2)          <-------TEIL
           <------MYB83--------->TOE2(3)                <---------ANAC46 --------->ARR11(1)
          --------->MYB111(2)                           <---------RRTF1(2)     <-----------RAV1(2)
          --------->ALFIN1                              <---------DREB2C(2)   <------NtERF2
          <---------AtMYB61                             <---------RRTF1(3)  <---------RAP2.6(2)
-->MYB52(1)<---------ANAC46                             <---------DEAR3(1) <-------TEIL<-------GAMYB
--->HVH21 <---------DEAR3(1)                   <---------AtMYB61--------->ALFIN1 <------NtERF2
---DOF5.7(2) --------->ALFIN1        <------ZmHOX2a(1) --------->ATERF1(1) <---------LBD16
 
gggattaagaagggaggtggaagaatcgtcaattggtagaggagattgcgatggtgatggcggcgatgtgggagaagatgcggcagggttcgttgggacg  2833600
                                            <------ZmHOX2a(1)
                                --------->ALFIN1                <---------ZAT2
                              <---------ANAC46                  --------->At4g35610
                              <---------ANAC58                <---------ZAT18
                              <---------ANAC58        --------->ALFIN1          <---------ANAC58
                             <---------DEAR3(1)<------ZmHOX2a(1)<---------At4g35610      <---------ARR14(2)
                ===================================HOX2a_HOX2a--------->ZAT18   <---------ANAC58
                <------ZmHOX2a(2)<---------MYB46(3) <---------ANAC46           <------MYB83
                ================================HOX2a_HOX2a<---------ANAC58    <------MYB46(1)
      =================HOX2a_HOX2a        --------->ALFIN1 <---------ANAC58  <--------P <------ZmHOX2a(1)
      <------ZmHOX2a(1)---------->DOF2   <------ZmHOX2a(1) <---------ANAC46  --------->ALFIN1
 
agcgggagaggaagaagagatcgagttaaagggccgtggtcgaaggaggaggatgatgtgttgagtgagctcgttaagaggttgggagcgaggaattgga  2833700
                                                                               --------->ANAC58
                                                                               --------->ANAC55(1)
                                --------->ANAC58            <---------At4g35610--------->ANAC58
                                --------->ANAC58            --------->At4g35610--------->ANAC46
                            --------->ANAC58      <------MYB83         --------->ARR14(2)
                            --------->ANAC58      <------MYB46(1)      <---------ARR11(1)
                            --------->ANAC46     <---------AtMYB61     <---------ARR11(3)
                      <---------MYB46(3)        <---------MYB52(1)    <---------CCA1(2)        <----
<-----------GT1   ------>ZmHOX2a(1)    ---------->ID1       --------->ZAT2     --------->ANAC55(2)
 
gttttatcgctcggagtattcctggtcgttcaggcaagtcttgtcgtcttcgttggtgtaatcagctcaatccaaatcttatacgcaattcatttactgg  2833800
                                                      ------>ZmHOX2a(2)
                                                    --------->ARR11(3)
       <----------DOF2                              <---------ARR11(3)             --------->At4g35610
  <-----------GT1                               ------>ZmHOX2a(1)                  <---------At4g35610
<-----------GT1                                 =============HOX2a_HOX2a        <-------TEIL       <
-----MYB52(1)       <---------AHL20(2)      <-----------GT1 <----------DOF2 <---------YAB1       <--
 
tattttctctcttttgaaagtattcaatttcaattggtgattccatttttcctgtgatcttctcttttttttttgagttttgattcatctgtgttgaatt  2833900
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AGI:  At3g09230.1   
Description:  ATMYB1 (MYB DOMAIN PROTEIN 1); DNA binding / transcription factor. similar to MYB109 (myb domain protein 109), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G55730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15749.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:  from: 2833404    to: 2835344    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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