Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->AHL20(2)                                                     <---------AHL20(1)                                                     --------->AHL20(1)                                                   <---------AHL20(1)                                                   --------->AHL20(1)                                                --------->AHL20(2)                                                <---------AHL20(2)                                            ------>MYB83<---------AHL20(2)                                            ------>MYB46(1)                         ----------->GT1                      ----------->GT1     <---------MYB59           --------->GLK1(1)                   <----------DOF2<-----------GT1  <---------AHL20(2)        --------->YAB1 ----GT1  <---------AHL20(2)   <----------DOF2 --------->AHL20(2)   <---------GLK1(1)   gaataagtttattttttttgtctttggtaatttcttttacaataccaaattaaaatattttaaaaattggatttcaaaaacataatgagttatatggttg  2451200                                 --------->ATHB51                                 <--------HAHB4                                 <---------ICU4                                <---------YAB1                                                   <---                     --------->ANAC58                                                            ----                    <---------ZAT18                                                            ------                    --------->ZAT14                                             --------->ARR11(3)               <-------TEIL     --------->ICU4                                  <---------ARR11(3)       <-----------GT1  <----------DOF2    --------->WOX13(1)                   --------->ARR14(2)    <---------ICU4  <---------ZAT14<---------YAB1               <---------YAB1  <---------ARR14(2)<--   --------->AHL20(2)--------->ANAC58--------->YAB1 --------->ZAT6   --------->AHL20(2)  --------->AHL20(2)   tccaaatatttaccaggtccagtacgcttttagcattattaatagcaattagcaactctagggattgtcatttacataaacaaatcttcaattttttcat  2451300                                                                --------->HSFB2a(2)                                                                <---------HSFB2a(2)                                                             <---------MYB52(1)                                                    <---------ARR11(3)      ------>ZmHOX2a(1)   <---------ANAC46          --------->ARR14(2) ------AHL20(2)           <---------ANAC58          --------->ARR11(3) ----->AHL20(2)<---------ANAC58                  --------->HSFB2a(2)                         -------- --->TOE2(3)   <---------ANAC58      <---------YAB1 <---------ARR14(2)                       <------- -------AHL20(2)          <---------ANAC58<-----------GT1   <-------GAMYB        <---------ATHB12<---   taattttcctgtgttttgggtccctattgcttctaaattctaataaaccgtccagatattgctgttatggaaacaatttttcaataaatctcatcaactg  2451400                                                                                              <------                                                                                            <--------                                                                        <---------YAB1     --------->ARR11(3)                                                                      --------->YAB1       <---------ARR11(3)        <-----------ARR10                                            <---------YAB1  --------->ZAT2        --------->GLK1(2)                                           <---------ARR11(3)     <---------GLK1(2)        <---------ARR11(3)                                          --------->ARR11(3)   ----------->ARR10    --------->YAB1         ---------->ID1                      <---------YAB1        <---------At4g35610 ->At4g35610           <----------DOF2                         <---------AHL20(2)    --------->At4g35610 --At4g35610   <---------ICU4                                  --------->AHL20(2)    <---------ZAT2 ------GLK1(2)<---------ATHB12     <---------YAB1             --------->YAB1         <------NtERF2<--   attctatcaaaatctaatcactaggctttttcccattagcattagcgcataacaaagttttgaatattaatatcattatccataggcagcttagattttt  2451500                                         --------->ARR14(2)                                       ---------->DOF2                                     --------->At5g28300                                    --------->TOE1(3)                                    --------->TOE2(3)                                    ----------->GT1                                 ------>MYB83                                       --------->AHL20(2)                               <---------MYB59                                      <---------AHL20(2)                               --------->AtMYB61                                 <----------DOF2  ------>ZmHOX2a(1)           --------->MYB46(3)  ----------------->AGL3      --------->ARR11(3) --------->TOE2(3)          ------>MYB83--------->GLK1(1)           --------->AHL20(2) --------->TOE1(3)          ------>MYB46(1)       <-----------------AGL3      <---------ARR11(3) ---AHL20(2)              <---------MYB59<---------ARR14(2)         <---------AHL20(2) -RVE1(1)     --------->AHL20(2) ------>MYB46(1)  <-----------------AGL2   --------->TOE2(3)       -- ---------GT1 <---------AHL20(2) --------->MYB52(1)                --------->AHL20(2)      <---------   tttccttagcatcaaattaaactcaaaaccgaaccaaaccgtaaatccacaaactaattttggttcgaatttaaaaacattatcttttaattttgtcatg  2451600                                                                                            ---------                                                                                            <--------                --------->MYB46(3)                                                          ---------     --------->At4g35610                                                      <---------ZAT14     <---------At4g35610                                                      --------->ZAT14 <---------ALFIN1                             <----------DOF2  <---------ANAC58             <-------- ---->NtERF2    <---------ATHB12           <-----------GT1     <---------ANAC58  --------->ANAC46 --HVH21      *TSS              <----------DOF2            ---------->DOF2    <---------ZAT18      --   ccccctctgctaagtgcaaccattcgtcttctcgcttcatcgttttctcttttccgatggcaaaagcttgcctcttgcagtctactctactcccagctta  2451700                                                                            --------->ARR14(2)                                                                        --------->ANAC55(2)                                                                        --------->ANAC58                                                                        <---------HSFB2a(2)                                                                        <---------ANAC55(2)                                                                        --------->LBD16                                                                    <---------RAP2.6(3)                                                                    <---------SPL7                                                                    <-----------HVH21            <---                                                                    ------>NtERF2                ----                                                                   <---------ANAC58              <---    --------->ANAC46                                               <---------ANAC58--------->ZAT14    --------->bZIP60(2)                                            --------->DEAR3(1)           <----  <---------ALFIN1                                       <---------SPL7 --------->HSFB2a(2)     <---- >At4g35610                                             <----------DOF2 --------->ANAC58       ------ -At4g35610                                           --------->LBD16  <---------LBD16         <----- >ZAT2--------->ZAT14                                 --------->At4g35610   <---------ARR14(2)------>NtERF2 -ZAT2<---------ZAT14                        <---------At5g28300 ------>NtERF2     <---------ZAT14 ------->ANAC46       --------->YAB1   <----------DOF2<---------At4g35610--------->LBD16    <--------   ctctccacttcacaaacttcgtaatcaaaacatcaccctctctttctcaccgcttccgctgtcccgatgccgtcccggaatccactgctcagtttcggcc  2451800                                       <---------YAB1                                      --------->ARR11(3)                                     <---------GLK1(1)                                     --------->GLK1(1)                                    <---------ARR11(3)                           <---------At4g35610                           --------->ZAT2      <---------------------WRI1    --------->ARR11(3) ------DEAR3(2)            <---------ZAT2 ----->At4g35610           --------->At4g35610 ------At4g35610           --------->HSFC1(2) -----DEAR3(1)             <---------HSFC1(2) -----MYB46(3)             --------->HSFB2a(1)                                              --------- --->SPL7                  <---------HSFB2a(1)                         --------->ANAC58<---------ARR14(2) ----ORA47(1)           <------ZmHOX2a(1)                              --------->ANAC58--------->ARR14(2) -RAP2.6(2)   --------->ANAC46  --------->LBD16        <---------WOX13(1)   --------->REM1(1)   ggtgagactacaatacaatccatggaggaagctccgaagatatcatggggatgcgagattgattcacttgagaacgctacttctcttcagaactggctct  2451900                                                                   <-----------HVH21                                                                   <----------DOF2                                                               ---------->ID1                                                              <-----------HVH21                                                             --------->O2                                                             <---------O2  --------->GLK1(2)                                                             --------->bZIP60(2)                --------->LBD16                              =================bZIP_DOF                --------->At4g35610             <-----------HVH21<---------DEAR3(2)                <---------At4g35610      <---------DDF1      --------->TGA1a       ---------->DOF2              <---------LBD16           --------->ETT(2)    <------NtERF2 <---------GLK1(2) -------------->TaNAC69(2)              <---------ETT(2) ------>NtERF2 --------->ANAC46   ctgattcaggtctccctccgcagaaaatggctattgatagagtcgacatcggtgagcgaggcctcgtcgcttcacagaatctcagaaaaggagagaaatt  2452000                                              --------->ZAT6                                           <---------ZAT18                                           --------->ZAT14                                           --------->ZAT18                                    <---------ANAC58                                    <---------ANAC46                                    <---------ANAC55(2)                   --------->GLK1(2)     -----                                    --------->ANAC55(2)                   <-----------ARR10    <-----                        <---------ICU4<---------MYB52(1)      --------->ANAC58                <------                       <---------YAB1--------->LBD16         <---------LBD16              <---------ANAC58                   <-----------TGA1 <---------ANAC58 <---------ICU4      <---------GLK1(2)<---------ANAC58            ------>ZmHOX2a(1) <---------YAB1  <---------ALFIN1--------->ANAC58   --------->TOE2(3)         ------>ZmHOX2a(1)  <---------At4g35610     ------>ZmHOX2a(1)---------->DOF2      --------->TOE2(3)   gctcttcgttcctccttctctcgtcatcagtgctgattccgtaagttcacactcctaatttcactcggaatcaaagaatctaatcttatattccttgatc  2452100  Previous    Next  AGI:  At3g07670.1    Description:  SET domain-containing protein. similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G14260.3); similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G14260.2); similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G14260.1); similar to Os02g0725200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001047982.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41138.1); contains InterPro domain Rubisco LSMT substrate-binding (InterPro:IPR015353); contains InterPro domain Rubisco methyltransferase; (InterPro:IPR011192); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 2451614    to: 2454866    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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