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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                     --------->ARR11(3)
                                     <---------ARR11(3)
                                 --------->YAB1
                           ------>ZmHOX2a(2)
                          --------->GLK1(1)
                          <------ZmHOX2a(2)
                         <---------ARR11(3)
                         <---------ARR14(2)
                         <-----------ARR10
                         --------->ARR11(3)
                         <---------ARR14(3)
                         --------->ARR14(2)
      ----------->GT1    <---------AGP1 <---------LBD16
-------->YAB1           <---------CCA1(2)
--------YAB1        --------->ANAC46 --------->GLK1(2)     --------->MYB52(1)
------>AHL20(2)    <---------REM1(2)<---------GLK1(2)   --------->TOE1(3)
----->YAB1     --------->ZAT6   <---------ATHB12        --------->TOE2(3)
---->ICU4    <-----------GT1  --------->WOX13(1)  --------->ANAC46             <------ZmHOX2a(1)----
 
tataatcaagggtttattactctacgcagatctcaatcaaaatctcggaaaacacaaaaccctaacgatgaaattgagagaaggagagtgagaaccatgt  2360200
                                                                                            --------
                                                                                          --------->ANAC58
                                                                                    --------->SPL7
                                                                                   --------->ATERF1(1)
                                                                                   <------NtERF2
                                                                                 <---------ANAC58
                                                                          ------>NtERF2   --------->ANAC46
                                                                          --------->LBD16 --------->O2
                                                                         --------->ANAC58 <---------ALFIN1
                                                                         --------->DEAR3(1)------>NtERF2
                                                                         --------->ANAC46 ==========
                      ----------->RAV1(1)                          --------->MYB46(3)--------->ANAC58
                    <---------At4g35610                          <-----------GT1 <---------ANAC46
                    <---------ZAT2                    <---------ANAC58   --------->ANAC58 --------->ANAC58
                    --------->At4g35610   --------->ANAC58    <----------DOF2    <---------ANAC58
       --------->ANAC46                 ---------->DOF2       ======================================bZIP_DOF
       --------->ANAC58              --------->TOE2(3)<---------ANAC58 <---------ATERF1(1)--------->TGA1a
       --------->ANAC58 --------->AtMYB61 --------->ANAC58   --------->TOE2(3)  <---------LBD16
--->TEIL            <------NtERF2 <----------DOF2  <-----------GT1<---------At5g28300--------->ANAC58
 
acctcggtataagcatcaatggcagcaccaaaacgttctttcttaaagcaattgtttccgtcttcctttaaccgctccgccatggcggaagccacgcctg  2360300
                                                                        <-----------HVH21
                                                                        <---------PCF2
                                                                       <------NtERF2
                                                                       --------->ATERF1(1)
                                                                      ------>NtERF2
                                                                      --------->ABI4(2)
                                                                      <---------ATERF1(1)
                                                                     <---------ANAC46
                                                                    <------NtERF2
                 --------->LBD16                                    --------->ATERF1(1)
              ----------->RAV1(1)                                  <---------ERF1<---------ANAC58
             --------->ANAC58                                      <---------DEAR4(2)
             --------->ANAC58                                      <---------RAP2.3(1)
            ------>NtERF2                                          <---------RRTF1(1)
          <---------ZAT18                                          ------>NtERF2 <---------ANAC58
        --------->ANAC46                                          <---------RAP2.3(2)
        --------->ANAC58                                          <---------RAP2.3(3)
        --------->ANAC58                                          --------->DEAR3(1)
       <---------LBD16                                            <---------DEAR3(1)
   <---------ARR11(1)                                             <---------O2  --------->ABI4(2)
   <-----------ARR10                                              --------->O2<---------MYB52(1)
   <---------ARR11(3)                                    <---------ANAC58    --------->LBD16
   --------->ARR14(2)                       --------->ZAT6       --------->ATERF1(1)    <---------At4g35610
   <---------ARR14(2)                       <---------ALFIN1    <---------ATERF1(1)   <---------HSFB2a(2)
  <---------CCA1(2)   >>>>>>>>>MYB2  ------>ZmHOX2a(1)   <---------ANAC58  <---------LBD16
--->RAV1(2)<---------ALFIN1   <----------DOF2 --------->ANAC46 ----------->HVH21<-------TEIL   <----
=========================================bZIP_DOF ------>ZmHOX2a(1)<---------ATERF1(1)--------->HSFB2a(2)
 
taaccatatctacggcaccccagaaaaccaagtctttatcctttccaacactcctctgtaacttgtgcgacggcgcgtcccggtgcgtttcagaagagaa  2360400
            --------->HSFB2a(2)
       <---------HSFB2a(1)                                                                      ----
       <---------HSFC1(2)                                                                       <---
       --------->HSFC1(2)                                                                       ----
       --------->HSFB2a(1)                                                                      <---
   --------->ANAC58                       --------->DAG2                                      <-----
   --------->ANAC58                 --------->ANAC58           <---------MYB52(1)             <-----
  ------>NtERF2               ---------->DOF2      --------->AHL20(2)                       <-------
  --------->LBD16 ---------->DOF2   --------->ANAC58      ------->TEIL                    --------->LBD16
 --------->RAP2.6(2)     ----------->GT1---------->DOF2   ------------>MYB.PH3(1)       <---------LBD16
-----REM1(1)<---------HSFB2a(2)--------->DAG2      <---------AHL20(2)---------->DOF2<----------DOF2
 
gtagccgcgaaatttctcgatgaaaggagagagaaaagtaagcaaaagggaattttaaatgaatcggttatcgaaagagattagtctctttaccgggtca  2360500
                          ------>ZmHOX2a(2)
                         <------ZmHOX2a(2)
                        <---------ARR11(1)
                        <---------ARR11(3)
                        --------->ARR11(3)
                        <---------ARR14(2)
                        --------->ARR14(2)                                  --------->YAB1
                        <-----------ARR10                                   ----------->GT1
                        <---------AGP1                           <------------CBF  <---------AHL20(2)
----->ZAT2             <---------CCA1(2)                        <---------MYB46(3) --------->AHL20(2)
------ZAT2             <---------ARR14(1)                       --------->ATHB12  <---------AHL20(1)
----->At4g35610       --------->LBD16                          --------->WRKY18(1)--------->AHL20(2)
------At4g35610     <---------LBD16                     ---------->DOF2   <------------CBF         <
----WRKY12        --------->GLK1(2)                  --------->TOE2(3)   --------->MYB52(2)       <-
----WRKY38(1) --------->YAB1                         --------->YAB1  ----------->GT1   <---------AHL20(2)
----HVH21    <------ZmHOX2a(2)         <----------DOF2*TSS    <-----------HVH21   <---------AHL20(2)
 
gctcgatgagacttggatcataatccggatcttatagtcattctttttgtttactaccataaaccggtcattgggttaattgtaaattatttatacaact  2360600
                                                     --------->AHL20(1)
                                                     <---------AHL20(1)
                                                     --------->AHL20(2)
                                                     <---------AHL20(2)
                                                    --------->AHL20(2)
                                                    <---------AHL20(2)
                                            <---------AHL20(2)
                  <-----------HVH21         <---------YAB1
            --------->ARR14(2)       --------->AHL20(2)
            <---------ARR14(2)  <-----------TBP  <---------AHL20(2)
        <---------LBD16        <----------DOF2  --------->AHL20(2)                       <---------AHL20(2)
        --------->LBD16 ----------->HVH21--------->AHL20(1)                         >>>>>>>>>MYB98
       --------->ANAC46--------->LBD16   <---------AHL20(2)                     ----------->GT1
      <---------LBD16 <---------ANAC46   --------->AHL20(2)                     --------->YAB1
xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------AHL20(2)                  --------->AHL20(2)
-----ZmHOX2a(1)  --------->ANAC46 --------->YAB1<---------AHL20(2)       <---------AHL20(2)  <------
 
aggattaaacccgcggtttcccgtcgcgcgaaggcttttataaattttttattaaataaattagtgtgtgttatattaaaaaatagtaacatatatttag  2360700
                               <----------DOF2
                               --------------->AGL15
                               <---------------AGL15
                       <---------WOX13(1)
                     <---------ICU4
                     -------->HAHB4                                                   <---------TOE1(3)
                     --------->ATHB12                                                 <---------TOE2(3)
                     <--------ATHB1                                       --------->AHL20(2)
                    --------->ICU4                                        --------->AHL20(1)
                    <---------YAB1                                        <---------AHL20(1)
                  --------->YAB1                                    --------->ANAC55(2)     <-------
                  <---------ICU4 <---------AHL20(2)               --------->YAB1<---------ANAC46  --
                 <---------ATHB51--------->AHL20(2)      --------->ATHB12 <---------AHL20(2)<-------
         ----------->GT1   <---------GLK1(2)            --------->ICU4 ------->TEIL  ---------->DOF2
---AHL20(2)      <---------AHL20(2) <---------YAB1   <-----------GT1<---------ANAC55(2)     <-------
 
tttttttaaaactggtataaataatgattggaatcttttattagtatggagactatttactgattagaatcatgtattttattgtgtttaaagttgtgta  2360800
                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                                       <---------WOX13(1)
                                                     --------->YAB1
                                                     -------->HAHB4
                                                     --------->ATHB12
                                                    --------->ICU4                       <----------DOF2
                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  ------>ZmHOX2a(2)
                                                    <---------YAB1                    <---------ARR11(3)
                                                  --------->YAB1     --------->AHL20(1)<------ZmHOX2a(2)
                                                 <---------AHL20(2)  <---------AHL20(2)<---------RVE1(1)
                                                <---------AHL20(2)  --------->AHL20(2)--------->ARR11(3)
                                                --------->AHL20(2)  --------->ATHB51  --------->AGP1
                                           <---------AHL20(1)       <---------AHL20(2)<---------ARR14(3)
                                           --------->AHL20(2)       <---------ICU4    --------->ARR14(2)
--ANAC58                                   --------->AHL20(1) ----------->GT1   --------->YAB1
------->WOX13(1)                 <----------ID1 <---------AHL20(1) <---------YAB1     --------->ARR14(3)
--ANAC58                       ----------->GT1  --------->AHL20(1) --------->ICU4     <---------ARR14(2)
--ANAC46               ----------->GT1  --------->AHL20(2)  ----------->GT1    <---------YAB1      -
 
tcaattactaaatgtgtatttgatataagtaaaatggtgacaaaaatataatataatgatagatggtgtaattattttgttgattataagatctttaaaa  2360900
                                                --------->TOE2(3)          --------->YAB1
                                          --------->YAB1       <----------DOF2
                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                       <---------YAB1   <---------ARR11(3)  --------->ARR11(3)
             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->YAB1  <-----------GT1
     <------MYB46(1)<---------AHL20(2)  --------->ARR11(3)  <---------ARR11(3)    <---------GLK1(2)
     <------MYB83 <----------DOF2      --------->YAB1    <------ZmHOX2a(1)<---------ATHB12
--------->DOF2<-----------GT1       ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      ------
 
accaaagttggtatgttttatcttttatttttggcaaaacaaagataataacatttatgaggagaccttttttctaaatcatacagaatatttatactaa  2361000
                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                                                --------->LBD16
                                                               --------->ANAC46
                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                                           <-----------GT1
                                                          <---------ARR14(2)                <xxxxxxx
                       ------>ZmHOX2a(2)                  --------->ARR14(2)                <xxxxxxx
                    --------->YAB1                        --------->KAN4(2)               --------->YAB1
                    <---------ICU4                       --------->KAN4(1)               <xxxxxxxxxx
                  <---------TOE2(3)                      <---------KAN4(1)           <xxxxxxxxxxxxxx
                 --------->YAB1                    ---------->DOF2 ---------->DOF2 ----------->GT1
                --------->ICU4                    --------->AHL20(2)               <xxxxxxxxxxxxxxxx
         <---------At4g35610             <---------YAB1  <----------TaMYB80        <xxxxxxxxxxxxxxxx
 <---------ARR14(2) -------->HAHB4   <---------AHL20(2) <---------KAN4(2)        ---------->DOF2
---->DOF2--------->At4g35610         --------->AHL20(2) ---------->TaMYB80    --------->AtLEC2  <xxx
 
agagtattttgaagctgtattaatgatcccattacccaaattatatgatacaataaaagaatatacccccaaaagaaaacaatgcaaagtaaatcatctt  2361100
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AGI:  At3g07370.1   
Description:  ATCHIP/CHIP (CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN); ubiquitin-protein ligase. Identical to E3 ubiquitin-protein ligase CHIP (CHIP) [Arabidopsis Thaliana] (GB:Q9SRS9); similar to PAPP5/PP5 (PROTEIN PHOSPHATASE 5), phosphoprotein phosphatase/ protein binding [Arabidopsis thaliana] (TAIR:AT2G42810.2); similar to PAPP5/PP5 (PROTEIN PHOSPHATASE 5), phosphoprotein phosphatase/ protein binding / protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G42810.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN63106.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro doma
Range:  from: 2358089    to: 2360555    Orientation: Reverse
Links:  TAIR  MIPS 
 
AGI:  At3g07380.1   
Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60990.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48190.1); similar to unknown [Populus trichocarpa] (GB:ABK94817.1); contains InterPro domain Protein of unknown function DUF23 (InterPro:IPR008166)
Range:  from: 2360994    to: 2362020    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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