Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         ------->TEIL                                       --------->GLK1(2)                                      <---------ARR14(1)                                  <-----------GT1                                              ------                                  --------->MYB52(1)              <---------AHL20(2)    ---------->DOF2                              --------->DAG2           <---------ANAC46        <---------------AGL15                             ---------->DOF2       <---------At4g35610         --------------->AGL15 ------->GT1            ----------->GT1<---------ARR11(1)     --------->AHL20(2)    ---------->DOF2 -   ggaaatatttcagcctcatactcatacagtgaaaagtaacgaatctatagtttagctacttggattatttagttttgttttcttaagaaagaaagaagaa  1935700                                                                                                <XXXX                                                                                            <--------                                      <---------WOX13(1)                                 --------->GLK1(2)                                  <---------WOX13(1)                              <---------WRKY38(1)                               <---------YAB1                                    --------->WRKY18(1)                             --------->YAB1               <---------ICU4        <-----------HVH21   <                            <---------ATHB12              --------->YAB1       ----------->GT1 <----- ---->DOF2            --------->MYB52(1)               --------->TOE2(3)<---------ICU4   <---------ARR11(3) --------->DOF2>>>>>>>>>TBF1--------->ICU4   <---------ZAT6        <-----------------AGL1--------->ARR11(3)   agaaaaggaatgtagaagaagaagtaacgaatgatgatagattgatagtgtaagacacattaatgacttccacattatggccggtcaaaagtatcttttg  1935800                                                                   --------->ARR11(3)                                                                   --------->AHL20(1)                                                                 --------->AHL20(1)                                                                 <---------AHL20(1)                                                              --------->AHL20(2)                    -                                                          <---------MYB46(3)                       <- XXXXXXXXXXXXXXXXMIR832-5P----------->RAV1(1)        <---------YAB1<---------AHL20(1)              -- --DOF2      <-----------HVH21                    <---------ZAT6 <---------AHL20(2)     --------->ANAC46 -----------GT1    --------->ANAC46    --------->GLK1(2)  ----------->GT1        ------>ZmHOX2a(1) <- ----YAB1 <---------At4g35610         <---------GLK1(2)  <---------ATHB12   --------->KAN4(2)      --   attttcaattttagctgttacacaacaacaacaaaaaatagattctgaattagtgatcaatggttaaaatattttggtcattcctcatctacgaaaatga  1935900                                                                               <---------DAG2                                                                               <----------DOF2                                                                             <------NtERF2                                                                            ------>NtERF2                                                                            <---------RAP2.3(1)         --------->DEAR3(1)                                <---------ANAC58<---------RAP2.6(2)         <---------ALFIN1                     --------->AHL20(1)           <---------RAP2.3(2)         --------->AtMYB61                    <---------YAB1               <---------DEAR3(1)        --------->MYB46(3)                    --------->AHL20(2)   --------->AHL20(2) -------->CCA1(2)                             <---------AHL20(2)   <---------AHL20(2) --------ARR14(2)                    <-----------GT1       <---------ANAC58<---------RAP2.3(3) ------->ARR11(3)          <---------MYB46(3)<---------AHL20(2)   --------->ICU4                   -- --------ARR11(3)   <---------ARR14(2)       --------->AHL20(2)   <---------ATHB12                 == ------->ARR14(2)   --------->ARR14(2) --------->TOE2(3)  <-------TEIL    --------->ATERF1(1)<-------   agatttgatcaccaccgaaacgtatacagtagttgtttttttcttaattttattgacaaattcgtgcaattaatgaggcggctttatctagtctagtttt  1936000                                                                                          --------->YAB1                                                                                         <---------YAB1                                                                                   --------->ICU4                          <---------DOF5.7(2)                                      <---------YAB1                          --------->MYB52(1)                                   <-----------HVH21                         <---------WRKY12                                      <-----------TGA1                         <---------WRKY45--------->AHL20(2) <------ZmHOX2a(2) --------->ANAC46 --------->AHL20(2)      <---------WRKY38(1)               <---------ARR11(3) --------->ANAC58 ------------->AGL15    --------->WRKY18(1)                --------->ARR11(3) --------->ANAC58 ========================================================================================MADS_MADS --ZAT6     ----------->GT1<---------At4g35610 ----------->GT1         ----------------->AG      <---   agtttatatagtagtggataaaactagtcaacggattatatgaaaaaataagtgaatttaagatcaaactcataccaaaaacgtcatgtttatcattttt  1936100                             --------->TOE2(3)              <----------ID1                           <---------YAB1                  ----------->GT1   --------->DAG2                         --------->YAB1                   --------->DAG2    ---------->DOF2              <---------ALFIN1*TSS   <-----------HVH21    <---------------AtSPL8  --------->At5g28300              --------->ANAC46------>ZmHOX2a(1)           --------------->AtSPL3 ----------->GT1         <-----------GT1<---------YAB1         --------->YAB1     <---------GLK1(2)  ---------->DOF2 --------RAV1(1) <---------TOE2(2)  ------>ZmHOX2a(1)    ---------->DOF2 --------->YAB1   tgttgttgttttttccacacaggtttatcatccttatcctatcagcgaataatagaagaaaaagtacaaattctctaataaagcggtaaaagcgtttaag  1936200                                               <---------HSFB2a(1)                                               --------->HSFB2a(1)                                               --------->HSFC1(2)                                               <---------HSFC1(2)                                              <---------ARR11(1)                                              --------->GLK1(2)                                              <-----------ARR10      --------->ANAC46                                              --------->ARR14(2)     <---------ALFIN1                                              ------->TEIL          ------>MYB46(1)                                             <---------GLK1(2)      ------>MYB83  -------->P                                             <---------CCA1(2)      -------->P    ------>MYB83                       ------>NtERF2-------->ATHB1                 ----------->RAV1(1)           ----                   --------->ANAC58 --------->ATHB51       <-----------ARR10      <---------TOE1(2) -                <---------ARR14(2)  <---------ICU4        <---------CCA1(2)       ------>MYB46(1)----                --------->ARR14(2) <---------YAB1       <---------ANAC58         ------>ZmHOX2a(1)  -            --------->DAG2      <---------YAB1<---------ARR14(2)  --------->AtMYB61              ----           ---------->DOF2    <-----------GT1<---------ARR14(1)  --------->MYB46(3)            ------      >>>>>>>>>TBF1--------->ANAC58--------->ICU4       <---------ANAC58<---------ALFIN1 <<<<<<<<<TBF1   aagatgaagaagaaaaaggaaacgcctccaaatcaccattattgtccgaatcttcttcgcgtctctcaccaacaccacttctcctaccttcttcttcaca  1936300                                                                                            <--------                                                                                           <---------SPL7                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                        <---------CCA1(2)        <---------At5g28300    <---------GLK1(2)                              --------->WOX13(1)          ----------->HVH21   -------->HAHB4                                <---------YAB1               ------>ZmHOX2a(2)  <---------ATHB12                              --------->TOE2(3)            <------ZmHOX2a(2) ----->ANAC58                                  <---------ICU4               <---------ARR11(3) ----->MYB83          --------->YAB1           --------->YAB1               --------->ARR11(3) ----->ANAC46        <-------TEIL           --------->YAB1                  <---------AGP1<---------bZIP60(2) ----->MYB46(1)  <---------AHL20(2)<------ZmHOX2a(2)  --------->YAB1 ================HOX2a_HOX2a ----->ANAC58   --------->YAB1    --------->ARR11(3)  <---------ICU4 ===============HOX2a_HOX2a ----- --->ANAC46<---------ANAC46       <---------ARR11(3) <---------ATHB12------>ZmHOX2a(1) ----------->HVH21   ccaaatgattctctcgtataatattcatcaaacccagatcatgttttcatcatcaatcatctcttaaactcctctatagatctcaccgcatgacgttccg  1936400                                                  <------NtERF2                                                 ------>NtERF2                                                <---------ATERF1(2)                                                --------->RAP2.3(2)                                                --------->RAP2.3(3)                                                --------->RRTF1(2)                                                --------->RRTF1(3)                                                --------->DREB2C(2)                                                --------->DEAR3(1)                                                --------->RAP2.6(2)                                                <---------ALFIN1                                                --------->ATERF1(2)                                               --------->RRTF1(1)                                               --------->ATERF1(1)                                               <------NtERF2                                               --------->RAP2.6(1)                                               --------->DEAR4(2)                                               --------->ORA47(2)                                               --------->RAP2.3(1)                                              ------>NtERF2                                              <---------At4g35610                                              --------->ABI4(1)                                              --------->At4g35610                                              <---------ATERF1(1)                                              <---------DREB2C(1)                                              <---------RAP2.3(1)                                              <---------DEAR4(2)                                             --------->RAP2.3(2)                                             --------->DEAR3(1)                                             --------->RAP2.3(3)                                -----                                             --------->ANAC46                                  ------                                             <---------DEAR3(1)                                ------                                            --------->ERF1                                --------->HSFC1(2)                                            --------->ORA47(2)                            <---------ZAT2                                            --------->DEAR4(2)                            <---------GLK1(1)                                            --------->RRTF1(1)                            --------->GLK1(1)                                            --------->ATERF1(1)                           --------->ZAT2                                            --------->RAP2.6(1)                           --------->At4g35610            <---------GLK1(1)              <---------ATERF1(1)                          <------NtERF2            --------->GLK1(1)             --------->ANAC58                            <---------DEAR3(1)            ---------->DOF2               --------->ANAC46                            --------->ETT(1)           <---------ARR14(2)     --------->ZAT14<---------ATERF1(1)            --------->ZAT2 <-----         --------->ANAC46         <---------ZAT14--------->ABI4(1)              <---------ZAT2<------        --------->LBD16  <---------ZAT18  --------->ANAC58                      <---------At4g35610       <-----------RAV1(2)        --------->REM1(2)                             ----------->RAV1(2)       <---------LBD16 --------->ANAC46<---------ZAT18   ------->GAMYB          --------->At4g35610 < --------->ZAT14   --------->WRKY18(1) --------->ZAT14  --------->MYB46(3)  <-----------HVH21-------- -ARR14(2)<------ZmHOX2a(1) <---------ALFIN1--------->RAP2.3(1)            <----------DOF2<---------At4g35610 ---->LBD16--------->ARR14(2)  <---------ANAC46--------->ERF1      --------->ZAT14  <-----------HVH21   aagtttactccaggaaatgcggtctaggccacaccgtgtagttcacgccgccgcctcaaccgctaatagttcagaccctttcagctggtcggagctcccg  1936500                                                         <------NtERF2                                                         --------->ATERF1(1)                                                <---------MYB46(3)                                              --------->ATERF1(1)                                              <------NtERF2                                             <---------ATERF1(1)                                             <---------RAP2.3(1)                                             ------>NtERF2                                             <---------ORA47(2)                                             <---------ERF1                                             <---------DEAR4(2)                                            <---------DEAR3(1)                                            <---------RRTF1(3)                                            <---------ANAC46                                            <---------RAP2.3(3)                                            --------->DEAR3(1)                                            <---------RAP2.3(2)                                           <------NtERF2<-----------HVH21            <------NtERF2                                           <---------ABI4(1)                        <---------RAP2.6(3)                                           --------->ATERF1(1)                      ------>NtERF2<---                                          ------>NtERF2 <---------RAP2.6(3)         --------->LBD16      <---------ANAC46                    <---------ATERF1(1)         --------->ALFIN1<---------ANAC46     --------->At4g35610                  <---------RRTF1(1)         <-------MYC3  <---------RAP2.3(3)  <---------At4g35610                    <---------DEAR3(1)          ------->MYC3  --------->ATERF1(2)  --------->At4g35610                    <---------RAP2.3(3)        <---------O2   <---------RAP2.6(2)  <---------ZAT2                         <---------RRTF1(3)   --------->RAP2.3(1)  <---------DEAR3(1)  --------->ZAT2           <-------GAMYB <---------RRTF1(2)<---------LBD16         --------->DEAR3(1) --------->ARR14(2)      <---------TOE1(3)<---------ERF1<---------ATERF1(1)        <---------ATERF1(2) <---------ARR14(2)      <---------TOE2(3)<---------RAP2.3(1) <------NtERF2       --------->DEAR3(2) ---->LBD16         --------->ATHB12     <---------RAP2.3(2) --------->LBD16      --------->ATERF1(1) --->LBD16         --------->ICU4        <---------ATERF1(2)<---------DEAR3(1)    <---------LBD16---- --->HSFB2a(2)     <---------YAB1        <---------RAP2.6(2)<---------ANAC46<---------ANAC46     <--- ----HSFB2a(2)     ------>ZmHOX2a(1)     --------->ATERF1(2)<------NtERF2   <---------ANAC58     ---- ---LBD16     <---------GLK1(1)       --------->WRKY12 --------->DEAR3(1)   <---------ANAC58 <------- ------ZmHOX2a(1)<-----------------AG ----------->HVH21<---------DEAR3(1)<---------RAP2.6(2) <------- ->MYB52(1)   --------->GLK1(1)     <-------GAMYB<-------GAMYB------>NtERF2<------NtERF2<-------GAMYB   gaggagctgcttagagaaatcctgattagggttgagactgttgacggcggcgattggccgtcgcggcgaaacgtggtggcttgtgccggcgtttgtcgta  1936600  Previous    Next  AGI:  At3g06380.1    Description:  ATTLP9 (TUBBY-LIKE PROTEIN 9); phosphoric diester hydrolase/ protein binding / transcription factor. Identical to Tubby-like F-box protein 9 (TULP9) [Arabidopsis Thaliana] (GB:Q9SQU1); similar to AtTLP11 (TUBBY LIKE PROTEIN 11), phosphoric diester hydrolase/ transcription factor [Arabidopsis thaliana] (TAIR:AT5G18680.1); similar to unknown [Populus trichocarpa] (GB:ABK94895.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 1936130    to: 1938227    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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