Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <-------TEIL                             <---------GLK1(2)         --------------->AtSPL8               ------>ZmHOX2a(1)         <---------------AtSPL8           <-----------GT1       --------->ICU4                    --------->YAB1                                      <-------    <---------AHL20(2)               <---------AHL20(1)                                      <-------    --------->AHL20(2)               --------->AHL20(2)            <-------TEIL              --------   --------->AHL20(2)                <---------AHL20(2)        <---------------AtSPL8  ----------->GT1 --------GT1 ------->TEIL            --------->AHL20(1) <---------MYB46(3)       --------->ARR11(3)   aactatttaattatgtacatacaaaattgaattgactaattaattatcctattgcagattgttgaagggtacatgatcagagagatgttgggaaaataat  1161000                                                                                            ---------                                                                                            <--------                                                                                          <---------ICU4                          --------->ANAC58                                      --------->ANAC58                          --------->ANAC58                                      --------->ANAC55(2)                        ------->GAMYB                                           --------->ANAC58                        --------->TOE1(2)                                       --------->ANAC55(1)                       --------->MYB46(3)                                       ----------->GT1                       <---------ATHB12                                         <---------ANAC55(2)                       <---------MYB55(2)                                       --------->ANAC46                      ------>MYB46(1)                                          <-------TEIL ---------                      -------->P                                              --------->CCA1(2)                      ------>MYB83                                           --------->ARR14(2)                     --------->MYB55(1)                                      <---------ARR14(2)<-----                    <---------MYB55(2)                                      <------ZmHOX2a(1)  ------    <---------ANAC46--------->AtMYB61                                      <------MYB46(1)--------->YAB1    <---------ANAC58<---------MYB111(2)            <-----------------AGL1  <------MYB83  <---------ATHB12    <---------ANAC58<---------MYB46(2)            <-----------GT1        <--------P    --------->WOX13(1) --ATHB51           --------->MYB46(3)      <-----------------AGL2    --------->ALFIN1<---------AHL20(2) --AHL20(2)         <---------MYB111(1)  <----------DOF2           --------->DAG2     --------->AHL20(2) ->AHL20(2)        --------->MYB46(3) ------>ZmHOX2a(1)           ---------->DOF2    --------->ICU4   tctgttccttgtatttgttctaccaaccaaggaaaacctccttctttccatttttcgattgtggaaataaaagtggtaggatacgtaattaatcatgtaa  1161100                                                                            <---------TOE2(1)                                <---------ICU4                              <---------TOE1(1) >ANAC55(2)                  --------->YAB1                                --------->SPL7 -ANAC55(2)               ------>ZmHOX2a(1)                              <---------SPL7 -->GT1                   <----------DOF2      <----------DOF2        --------->ZAT14               - ------GT1         <-----------GT1--------->TOE1(2)                   <---------ZAT14               < ->TEIL  ---------->DOF2 --------->TOE2(3)<---------MYB52(1) --------->AHL20(2)                  ----   ctatttgccctaaaagttatataacatcctttaataactacgacgtttgctttaacaaaaaaaaaaaataactacagtacgacgtttgaagtaagaagat  1161200                      --------->LBD16  --------->ANAC46                     <---------HSFB2a(2)                          <---------ICU4                     --------->HSFB2a(2)   ---------->DOF2        -------->HAHB4                     --------->ANAC46  --------->ANAC58           --------->YAB1                 --------->MYB46(3)    --------->ANAC55(2)       --------->ICU4      <---------TOE2(3)                <---------ANAC55(2)    <---------AHL20(2) <---------AHL20(2) --------->LBD16  <-----------GT1          --------->AHL20(2)                 <--- -------->AHL20(1) ----------->RAV1(1) --------->ANAC58      --------->AHL20(2)     <---------WRKY38(1) ---------AHL20(1)------->GAMYB <---------ANAC55(2)    <----------DOF2      <---------DAG2       ---- ----->AHL20(2)<-----------GT1  --------->ANAC55(2)<---------CCA1(2)        <----------DOF2     -----   tatatatttatgttttgtaacccccagaactaatacatatcacgttatagcccataacttttatttaattatgctgtgctttttagtcaatgggcctatt  1161300              --------->ICU4              <---------ATHB12                                                               --------         --------->ANAC46                                                                    --------        ------>MYB46(1)             <---------AHL20(2)                                       *TSS        ------>MYB83               --------->AHL20(2)                                        --------      <---------MYB59         ----------->GT1                 --------->ARR11(3)             --------      --------->AtMYB61 <---------AHL20(2)     --------->ANAC46                          --------->ANAC58    ------->TEIL       --------->AHL20(2)      ----------->HVH21         <------------CBF--------->ANAC46 ------AHL20(2)--------->YAB1<---------HSFB2a(2)              <---------ARR11(3)  --------->ARR14(2)- ----->AHL20(2)<---------ICU4--------->HSFB2a(2)   ----------->GT1    ------------>CBF   --------->ANAC58 ---->YAB1------------>CBF  <---------LBD16 <---------ETT(2)  --------->GLK1(2)   --------->ZAT14  --   ttaatggacctacacaatcatggaaataaatctggaaataaatctgtccacgacggaaaaacaaaatctataaacaattgtatgtatactcacgcacgac  1161400                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                                         <---------ANAC55(2)                                                                                    <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                               --------->AHL20(1)                                                                               --------->AHL20(2)                                                 <---------TOE2(3)             <---------AHL20(1) ->ANAC58                                ------>ZmHOX2a(2)                     <---------AHL20(2) --->HVH21                             <---------ARR14(2)                   <---------AHL20(2)   <--- ->ANAC46                   ----------->GT1  <----------DOF2               --------->AHL20(2)   <---- ->ANAC58  --------->ARR11(3)          --------->ARR14(2)                  <---------AHL20(2) ------- -------->At5g28300   --------->DAG2   <---------AGP1                     <---------WOX13(1)  <------ --------->GT1       ---------->DOF2   ------->TEIL      <-----------GT1--------->ATHB12 <---------ANAC46   gcagtgaaacagagatactgtggaaaagtgtgtttaaaatggatctgttttagggtatttatcaattcgaaaattgattaatttattaatttcgtaagct  1161500                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                         <------NtERF2                                                                         --------->ATERF1(1)                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                         <---------ZAT2                                                                         --------->ZAT2                                                                         <-------GAMYB                                                                        --------->MYB55(2)                                                                        <---------MYB46(3)                                                                        <---------DEAR3(2)                                                                        <---------ATERF1(1)                                                                        <---------RAP2.3(1)                                                                        ------>NtERF2                                                                        <---------ERF1                                                                       <---------RAP2.6(2)                                                                       <---------RAP2.3(2)                                                                       <---------ATERF1(2)                                                                       --------->ATERF1(2)                                                                       <---------RAP2.3(3)                                                                       <---------DEAR3(1)                                                                       <---------ANAC46                                                                      --------->ATERF1(1)                                                                      --------->DEAR4(2)                                                                      <---------DREB2C(1)                                                                      --------->DREB2C(1)                                                                      <------NtERF2                                                                      --------->RAP2.3(1)                                                                      <---------At4g35610                                                                     <---------RRTF1(1)                                                                     ------>NtERF2                                                                     <---------DEAR4(2)                                                                     <---------ATERF1(1)                                                                     <---------RAP2.6(1)                                                                     <---------RAP2.3(1)                                                                     <---------ERF1                                                                     <---------ORA47(2)                                                                    --------->DEAR3(1)                                                                    <---------RRTF1(3)                                                                    <---------ATERF1(2)                                                                    <---------DEAR3(1)                                                                    --------->ATERF1(2)                                                                    <---------RAP2.3(2)                                                                    <---------RAP2.3(3)                                                                    <---------RRTF1(2)                                                                   <---------ABI4(1)                                                                   --------->ATERF1(1)                             --------->YAB1                        <------NtERF2                             --------->ATHB12                      --------->RAP2.3(1)                             <------------ATHB5                   --------->LBD16 --------->HSFB2a(2)                             <---------ICU4                       <---------DEAR4(2)                       --------->ANAC58                           <---------RAP2.3(1)                       --------->AtLEC2                           <---------ATERF1(1)      <---------HSFC1(2)     -------->ATHB1                       ------>NtERF2   <---------HSFC1(1)      --------->HSFB2a(1)   <---------ATHB12                      <---------ORA47(2)          <------      <---------HSFB2a(1)   --------->ICU4                       --------->DEAR3(1)         <--------      --------->HSFC1(2)  --------->WOX13(1)                     --------->ATERF1(2)   <---------HSFC1(2)    ---------->DOF2    --------->ANAC58                          <---------DEAR3(1)    --------->At4g35610 --------HVH21       <---------ANAC58                            <---------RAP2.3(3)   --------->HSFB2a(1) ------DOF2          <---------AtLEC2                            <---------RAP2.3(2)   <---------HSFB2a(1) -->At4g35610        <---------ANAC58------>NtERF2               <---------ATERF1(2)   --------->HSFC1(2) ---At4g35610    <----------DOF2    --------->DEAR3(1)          <---------LBD16   <---------HSFB2a(2)   ttcacagaaagttcgaactctttgcatgcaatcattcgccgtcttcttccacaattgtgttttttagccggcggcggctggattcgagaagcttccgatt  1161600                                                                   <---------DAG2                                                                   <----------DOF2                                                                  <---------ANAC58                                                              <----------DOF2                                                     --------->ANAC58                                                     --------->ANAC58                                 ----------->GT1     --------->ANAC55(2)                                <---------TOE2(3)    <---------ANAC55(2) <---------ANAC46  --------->LBD16                   <---------ANAC46 ---MYB52(1)     <---------LBD16--------->MYB59    <-----------GT1<---------ANAC58       <---------YAB1 -YAB1--------->YAB1     -------->P       --------------------->WRI1                <----------DOF2   gttctgtatgatcagtctctccggactaaccagtaaggttttttgtttgtatgttacgcattctctttgcttttctcatgcattctcttttcttattgtg  1161700                                --------->ARR14(2)                                <---------ARR14(2)                                --------->MYB52(1)                             --------->HSFB2a(2)                     --------->LBD16                                          ---------->ID1                     ------>NtERF2       <---------TOE1(3)                <----------DOF2         <--                   <---------LBD16       <---------TOE2(3)         --------->GLK1(2)         ------>ZmHOX2a(2)     <-----------RAV1(1)     <---------HSFB2a(2)                  <---------GLK1(2)         <------ZmHOX2a(2)   ttgatcaatgtgggttcttactccgcgagttgcagaacggtttaagcttgaaattttgaaaaatgttggaatctgtctttgtcgatttgatgagatcgcc  1161800                                                                              <---------ARR14(2)                                                                             --------->ATHB12                                                                             ========================                                                    ----------->ARR10        ========================                                                <------MYB46(1)    <---------MYB46(3)                                                <------MYB83      <---------WOX13(1)      --------->YAB1                                            --------->ATHB12      <---------YAB1  ----------->GT1                                           <---------YAB1      <---------YAB1<------ZmHOX2a(1)                                    <---------TOE2(3) --------->ARR11(3)   <---------TOE2(3)  -------                                    <---------TOE1(3) <---------ARR11(3)   <---------TOE1(3)  <------ -------MYB52(1)               <----------DOF2<---------WOX13(1)--------->ATHB12  <---------ANAC46   gtttttgttttgtttggaattggcataaatctgtttttagggttcttgattggtgagatttttggatgattgttgataaggattgggtttattcaaaatt  1161900  Previous    Next  AGI:  At3g04370.1    Description:  Identical to Cysteine-rich repeat secretory protein 39 precursor (CRRSP39) [Arabidopsis Thaliana] (GB:Q6E263;GB:Q6E264;GB:Q9M849;GB:Q9M8Z3); similar to 33 kDa secretory protein-related [Arabidopsis thaliana] (TAIR:AT2G33330.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81929.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902) Range:  from: 1159429    to: 1161132    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g04380.1    Description:  SUVR4; histone-lysine N-methyltransferase. Identical to Histone-lysine N-methyltransferase SUVR4 (SUVR4) [Arabidopsis Thaliana] (GB:Q8W595;GB:Q3EBC4;GB:Q9M848); similar to SUVR1 (Arabidopsis homolog of SU(VAR)3-9 1), histone-lysine N-methyltransferase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G04050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83006.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 1161393    to: 1164935    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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