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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                          <---------DEAR3(1)
                      <---------RAP2.6(3)
                      <-----------HVH21
                     --------->RAP2.6(2)
              <---------ICU4
              --------->ATHB12
              -------->ATHB1
              --------->ATHB51     <---------ZAT2
             <---------ATHB51     --------->ANAC58
             <---------YAB1   ------>NtERF2
             --------->AHL20(1)   --------->ANAC58
             <---------AHL20(2)<------NtERF2
             --------->ICU4  --------->ATERF1(2)
          <---------AHL20(2) <---------DEAR3(1)                            <----------DOF2
          --------->AHL20(2) <---------ATERF1(2)             <---------ANAC58
          --------->AHL20(1)--------->At4g35610              --------->ANAC55(2)
         --------->AHL20(2) <------NtERF2                    <---------ANAC58      --------->At4g35610
 
ttgtcttaaaaaaaaaattattggccgtctcggcggcaagcagagagagagagactcaacgttttcgtaacaacaaaactttgagtagcagaaaattatc  673100
                                                                                              ------
                                                                                        --------->TOE2(3)
                                                         --------->ANAC58               --------->TOE1(3)
                                                         --------->ANAC58              <---------ANAC55(2)
                                                         =====================bZIP_DOF ----------->GT1
                                                         <---------TGA1a              <-------TEIL
                                                         --------->TGA1a              <-------------
                                                --------->ZAT18                      --------->ARR14(1)
                                       --------->MYB52(1)<---------O2                --------->CCA1(2)
                                       ============================bZIP_DOF         <---------ARR14(2)
                    ----------->GT1    ---------->DOF2   --------->O2  <---------ARR11(3)  ---------
             --------->ANAC46      --------->DAG2        <---------ANAC55(2)        <---------GLK1(2)
             --------->ANAC58     =================================bZIP_DOF         --------->ARR14(2)
             --------->ANAC58     ---------->DOF2        --------->ANAC55(2)  <------ZmHOX2a(1)
      ----------->GT1        ----------->GT1    <---------ZAT14        --------->ARR11(3)<---------MYB52(1)
      <---------ANAC55(2)<---------AHL20(2)     --------->ZAT14    ---------->DOF2----------->ARR10-
 
caaaaaaaaacgtgaaacgcaaatggaaaaaattgagaaaagtaacgcgagtccagtgccacgtatgaaaaaaagagcttaggaccagatacgttaatca  673200
                 <---------MYB52(1)
                 --------->DOF5.7(2)
                --------->TOE1(3)
                --------->TOE2(3)
              <-------TEIL                                               <---------ANAC58
              <---------TOE2(2)                                 ------->MYC3
              ------->TEIL                                      ------->MYC2
              --------->SPL7                                    <-------PIF5
            <---------SPL7                                      <-------MYC4
            --------->TOE1(2)                                   ------->MYC4
           <---------ANAC55(2)                                  ------->PIF5
           --------->ANAC55(2)                                 <---------PIF3(3)
           <---------ANAC58                                    --------->PIF3(3)
           --------->ANAC58                                    --------->TGA1a
           <---------ANAC58                                    <---------TGA1a
           --------->ANAC58                                    <---------O2
          <-------TEIL<---------AHL20(2)          <---------MYB52(1)     <---------ANAC58
          --------------->AtSPL8                --------->ANAC58<-------MYC2
          --------------->AtSPL3                --------->ANAC58<-------MYC3
      <---------------AtSPL3                --------->ANAC58   --------->O2
     <-----------RAV1(2)<---------TOE2(3)   --------->AtLEC2 <---------ALFIN1 --------->TOE2(3)
--->YAB1  <---------------AtSPL8       <----------ID1     <---------At4g35610 --------->TOE1(3)
----------TaNAC69(2)  --------->AHL20(2)    --------->ANAC58<---------ZAT18   --------->YAB1    <---
>WOX13(1) <---------------AtSPL3    =====================================bZIP_DOF  <----------ID1
--------->DOF2<---------TOE1(2)     ---------->DOF2       --------->ANAC46 <---------CCA1(2)    ----
 
gaaaaagaccaggtacgtacgttaattaatgtttttttaaaaaggccaagcacgttagtccagcccacgtggtatttcttatcttaacaacaaaactaat  673300
         --------->YAB1
         <---------ICU4
         -------->HAHB4
      --------->YAB1                                    --------->ANAC46
     <---------AHL20(2)                                 --------->ANAC58
     --------->AHL20(2)                                 <---------ANAC55(2)
    <---------AHL20(2)                             --------->ANAC58
    <---------AHL20(1)                  ------->GAMYB   --------->ANAC55(1)              <---------HSFB2a(2)
    --------->AHL20(1)               --------->MYB52(1) --------->ANAC55(2)              --------->HSFC1(1)
    --------->AHL20(2)              <---------WRKY12    --------->ANAC58                 --------->HSFB2a(2)
<---------AHL20(2)                 <------ZmHOX2a(2)    --------->bZIP60(2)          <----------DOF2
--------->AHL20(2)               --------->At4g35610    ----------->GT1              <---------DAG2-
------AHL20(2)  <---------MYB46(3)--------->AGP1   --------->ANAC46            <---------ALFIN1-----
----->AHL20(2) --------->SPL7  --------->YAB1      --------->ANAC58    --------->ANAC46 <---------LBD16
 
tttttaatttaataatcggacgttgcagaggtaatcagatcaacggtagagattacgacacgttatatcactctgcgaaactccaccgctttctggaatt  673400
             ----------->TBP ----------->GT1                                              <<<<<<<<<TBF1
         ----------->GT1--------->At4g35610                    <---------ETT(2) <---------At4g35610
    --------->YAB1 ---------->DOF2                             --------->ETT(2)<---------ARR11(3)
-------->AHL20(2) --------->AHL20(2)         --------->LBD16 --------->REM1(2) --------->ARR11(3)
---->AHL20(2)--------->AHL20(2)  ---------->DOF2             --------->ZAT14  *TSS   <----------DOF2
 
aaaaaaatcagagtgtataaataaaagagcagaggtaaaagctatctccagagtttaatataagtgtagacagagagagagagagcttctttcttcttct  673500
                         <---------AHL20(2)                                                  -------
                         --------->AHL20(2)         --------->LBD16                        <--------
              <---------ARR11(3)                  <---------LBD16<---------LBD16         <---------ALFIN1
              --------->ARR11(3)                 --------->MYB52(1)                     <---------ZAT14
            ----------->ARR10        <---------TOE1(3)        <---------ARR14(2)        --------->ZAT14
          --------->CCA1(2)          <---------TOE2(3)        ------->TEIL              --------->SPL7
 ---------->ID1 ------>ZmHOX2a(2)  <---------MYB52(1)    ----------->GT1                <-------TEIL
 
cttcgtcgctaagagatgatcttcgaatataaatctctgtaaggtttgcgaagaccggagtagtgaatctcggaattgttgaagaagacggtacaccgga  673600
                                                                <------NtERF2
                                                             <---------ABI4(1)
                                                             <------NtERF2
                                                            <---------RAP2.3(1)
                                                            <---------ERF1
                                            <---------DEAR3(1) <---------MYB46(3)
                                            --------->DEAR3(1)<---------DEAR3(1)
                                           --------->ATERF1(1)<---------ANAC46
                                         ----------->HVH21  ------>NtERF2
                                 --------->ARR14(2)         <---------RRTF1(1)
                                 --------->GLK1(2)         <---------DEAR3(1)
                                 <---------ARR11(1)     ----------->HVH21           <----------DOF2
                                 <---------ARR14(2) <---------HSFB2a(1)            <---------DAG2
                                 ------->TEIL------>NtERF2 <---------RAP2.3(2)     <----------DOF2 <
                                <---------ARR14(1) <---------ARR11(3)  --------->At4g35610         -
             <---------WOX13(1) <---------CCA1(2)  --------->ARR11(3)  <---------At4g35610         -
-->LBD16     <----------DOF2  <---------ANAC58<------NtERF2<---------RAP2.3(3)   --------->LBD16 ---
-LBD16    <---------YAB1      <---------ANAC58<---------------------WRI1         ------>NtERF2   <--
 
atcaattgcgattttgatttatgggaacggtttgcgaatctgtagcgacggcgaaatcttcgacggcggtgatgagctccattccgccttttctgagcaa  673700
                                <---------bZIP60(2)                           <-------MYC3
                                <---------O2                                  ------->MYC4
                                <---------ANAC46 --------->At4g35610          ------->MYC3
                                --------->O2     <---------At4g35610          ------->MYC2
       <---------YAB1           --------->TGA1a  <---------LBD16              ------->PIF5
     --------->CCA1(2)          <---------TGA1a--------->ATERF1(1)            <-------PIF5
  --------->ANAC58           ----------->HVH21<---------ZAT2                  <-------MYC2
  --------->ANAC58          --------->SPL7    <---------At4g35610     <---------ANAC46
 --------->SPL7           <---------SPL7      --------->ZAT2    <-------TEIL --------->HSFB2a(1)
 <---------TOE2(2)     --------->MYB52(1)     --------->At4g35610<---------ANAC46
---------SPL7    <------ZmHOX2a(2)      <---------ANAC58      <---------GLK1(2)         --------->ZAT18
-------->TOE2(2)<---------ARR14(2)   <---------ANAC46        --------->ZAT2  <---------HSFB2a(1)
-------->TOE1(2)--------->ARR14(2)--------->ALFIN1   <---------ARR14(2)      <---------ANAC58
------------>AtSPL3   ----------->HVH21 <---------ANAC58     --------->At4g35610------->TEIL
-------------AtSPL3   --------->WRKY12  <---------ANAC46 --------->MYB52(1)  <---------ANAC58 ------
 
aacgtacgatatggttgacgatccattgacggacgacgtggtgtcttggagcagcggaaacaacagcttcgtggtttggaacgtgcctgagttcgccaaa  673800
                                                 <---------ZAT2
                                                 <---------At4g35610
                                         <-----------TGA1
                                         <-----------HVH21
                                       <-------TEIL
                                     <---------GLK1(2)
                                    <---------At4g35610                         <---------GLK1(2)
                    --------->YAB1  <---------ZAT2                  <---------ZAT18               <-
                  --------->ANAC58  --------->ZAT2                  --------->ZAT18      <---------AHL20(2)
       ---------->DOF2         <-----------GT1   --------->At4g35610--------->ZAT14     <---------AHL20(2)
--->MYB52(1)      --------->ANAC58  --------->At4g35610             <---------ZAT14 <----------DOF2
 
cagtttctaccaaagtatttcaagcacaacaatttctccagcttcgtcagacagctcaatacttatgtgagtgaacttcgatcgattcttttttatttgt  673900
                                                                <----------DOF2
         --------->ATHB12              <----------DOF2 <---------DAG2        <-----------GT1      <-
       <---------WOX13(1)    <---------ANAC46          <----------DOF2  <---------AHL20(2)       <--
     --------->ATHB12        <---------ANAC58       <-----------GT1    <---------YAB1           <---
----------GT1                <---------ANAC58   --------->GLK1(2)     --------->AHL20(2)      <-----
 
ttttctcttcattgattcgattttcttcaatttcgtagttcgattttagggaatcttactttatgtgcttcatttttattttactctcttgttttttttg  674000
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AGI:  At3g02990.1   
Description:  ATHSFA1E (Arabidopsis thaliana heat shock transcription factor A1E); DNA binding / transcription factor. Identical to Heat stress transcription factor A-1e (HSFA1E) [Arabidopsis Thaliana] (GB:Q9SCW5;GB:Q0V855;GB:Q9M8U0); similar to HSF3 (HEAT SHOCK FACTOR 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G16820.2); similar to HSF3 (HEAT SHOCK FACTOR 3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G16820.1); similar to HSF3 DNA-binding domain/VP16 activation domain fusion protein [synthetic construct] (GB:AAN86075.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991);
Range:  from: 673479    to: 676410    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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