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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
>>>>>>>>>>
AGL24
>>>>>>>>>>
AGL20
>>>>>>>>>>
AGL22
<-----------------
AGL2
--------->
At4g35610
<---------
At4g35610
----------->
GT1
--------->
ANAC58
--------->
ANAC58
--------->
ANAC58
<------
NtERF2
<---------
ICU4
<---------
YAB1
<-----------
RAV1(2)
<---------
ALFIN1
<-----------
GT1
------->
DOF2
<-----------------
AGL3
<---------
ANAC46
--------->
CCA1(2)
<---------
ARR14(2)
>
RAV1(1)
--------->
ANAC58
--------------->
AtSPL8
<---------
TOE2(3)
--------->
ARR14(2)
--
caaaggcgcagggaagctaaatatggcccaacttgtactatttccgtttaacgcgttaagatagaaacgaatcaaatggactatccactcacagaaaaca
19557600
<-
<-----------
HVH21
--------
--------->
bZIP60(1)
--------
--------->
ARR14(2)
---------
<---------
ARR11(3)
<---------
ARR14(2)
<--------
--------->
ARR11(3)
------->
GAMYB
----------->
TGA1
------->
GAMYB
<---------
ARR14(2)
--------->
MYB52(1)
<---------
ICU4
--------->
ANAC58
--------->
GLK1(2)
<---------
GLK1(1)
--------->
YAB1
--------->
ANAC58
------->
YAB1
<------
ZmHOX2a(1)
<---------
GLK1(1)
<----------
ID1
--------->
MYB52(1)
ttcaaaatctggtgtcatacaggaagaaaccccaacggagcatttctgtaatcaaaatgacgaagacgacaaaacaaaaacaaaaaccccaacggaaatg
19557700
--------->
SPL7
<---------------
AGL15
<---------
ARR14(2)
<-----
--------------->
AGL15
--------->
ARR14(2)
------>
NtERF2
--------
At4g35610
<---------
TOE1(2)
--------
-->
DOF2
<---------
TOE2(2)
--------
->
GLK1(1)
----------->
GT1
<---------
ANAC58
--------
>
ARR14(2)
<---------
LBD16
>>>>>>>>>>
GT-3b
<---------
ANAC58
---------
-
ARR14(2)
<---------
ZAT6
--------->
TOE1(2)
---------->
DOF2
<-----------
RAV1(2)
<---------
ATERF1(1)
cagattactaactagagtaagtcgtctcggaacgaaggaagaaaaatagaataagagaaagaagaaggcgagcgcaggtac
cgcatccaggctcgccgac
19557800
<---------
ARR14(2)
--------->
ARR11(3)
--------->
ANAC55(2)
<---------
ANAC55(2)
--------->
bZIP60(1)
<---------
ANAC46
--------->
ATHB51
----------->
TGA1
<------
ZmHOX2a(1)
--------->
ICU4
----------->
HVH21
--------->
ARR14(2)
<---------------
AGL15
<---------
DOF5.7(2)
-
NtERF2
<---------
bZIP60(1)
----------------->
AGL2
--------->
MYB52(1)
--->
HVH21
<---------
HSFB2a(2)
<-----------------
AGL3
<---------
TOE2(3)
->
DEAR3(1)
--------->
HSFB2a(2)
<----------
DOF2
<---------
TOE1(3)
->
At1g77200
--------->
GLK1(2)
<---------
GLK1(2)
--------------->
AGL15
---------->
DOF2
>
DEAR3(2)
<---------
GLK1(2)
<---------
YAB1
----------------->
AGL1
<------
ZmHOX2a(1)
<
gatgagagtgacgcgattctcgaggattttgtcgatgattctccttttcatcgccataatcggaagcgaagcgaagttggaggagggtaaaggtaacgat
19557900
------->
GAMYB
<---------
SPL7
--------->
ANAC46
<---------
ZAT14
--------->
DEAR3(1)
--------->
ZAT14
--------->
RAP2.6(2)
<------
NtERF2
--------->
MYB46(3)
--------->
ANAC46
--------->
DEAR3(2)
<---------
LBD16
--------->
ANAC46
<------------
AtMYB77
--------->
LBD16
*
TSS
<---------
ORA47(2)
<---------
ANAC58
--------->
ZAT14
--------->
ZAT2
<---------
DEAR3(1)
<---------
ANAC58
<---------
ZAT14
--------->
ZAT14
--------->
At4g35610
--------->
ARR14(2)
--------->
SPL7
<---------
REM1(2)
<-
--------->
ARR11(3)
<------
NtERF2
<-----------
RAV1(1)
XXXXXXXXXXXXXXXXXXXX>
MIR413
<---------
ZAT18
---------
At4g35610
<---------
DREB2C(2)
--------------->
AtSPL3
------>
ZmHOX2a(1)
<---------
ZAT14
tcagaagagctggaagacgaagtcggcgaagaaaccgccat
tgttgtcgtacgcggagcactgtctctcttcctc
tacacacagagtctagtccagtctc
19558000
--------->
SPL7
------->
TEIL
<---------
SPL7
<---------
ANAC58
<---------
ANAC58
----------->
HVH21
<-------
TEIL
--------->
ALFIN1
<-
--------->
At4g35610
<-------
------>
ZmHOX2a(1)
<---------
At4g35610
--------->
At4g35610
--------->
YAB1
--------->
ZAT2
<---------
TOE2(2)
--------->
WOX13(1)
<----------
DOF2
<-----------
RAV1(2)
<---------
At4g35610
------------>
CBF
------>
ZmHOX2a(1)
<----------
DOF2
<------
ZmHOX2a(2)
<---------
TOE1(2)
--------
MYB52(1)
<---------
ATHB12
<----------
DOF2
<-----------
HVH21
<-------
TEIL
<--
tggtatttctaatactgccaatcacatccttcctctctacgcttttaggggggttttaggggagcgtcgatcaggtgcgacgagcgtacgtttagctcgc
19558100
<---------
REM1(2)
--------->
ARR14(2)
<---------
ANAC58
<---------
ANAC46
<---------
ANAC58
<---------
ANAC58
<---------
ANAC58
------>
ZmHOX2a(2)
<---------
LBD16
--------->
ARR11(3)
--------->
ARR11(3)
--------->
ALFIN1
--------->
ZAT14
-----
<---------
ARR11(3)
<---------
ANAC58
<---------
ZAT14
--------->
TOE2(2)
------
GAMYB
----------->
GT1
<---------
ARR14(2)
------>
NtERF2
<----
--
ZAT18
--------->
WRKY45
<---------
ANAC58
<---------
ALFIN1
--------->
LBD16
<---
-------
MYB46(3)
--------->
WRKY38(1)
--------->
ALFIN1
--------->
ANAC46
<---------
ANAC46
<---
tcgttgatctctcaagtctaataagttgactaggtttgactagtcaaaatgtgtgcgggtgtatacacacactggagagcttgccgcgaattacctaggt
19558200
--------->
YAB1
<---------
ATHB12
--------->
WOX13(1)
<------
NtERF2
------------>
CBF
<---------
RAP2.6(3)
------>
NtERF2
--------->
LBD16
--------->
RAP2.6(2)
--------->
RAP2.3(3)
>>>>>>>>>
AtERF-3
--------->
ATERF1(2)
<---------
ATERF1(2)
----------->
TBP
>>>>>>>>>
AtERF-4
---------->
DOF2
--------->
RAP2.3(2)
<
<------
ZmHOX2a(1)
--------->
DEAR3(1)
<---
<---------
TOE2(3)
--------->
RAP2.3(1)
<----
---->
PCF2
<------
ZmHOX2a(1)
--------->
ALFIN1
<------
ZmHOX2a(1)
-------
-----
TCP15(1)
<-----------
TBP
---------->
DOF2
----------->
GT1
<------
--------------
AG
--------->
AHL20(2)
--------->
DAG2
--------->
DAG2
---------
--------------
AGL1
--------->
ARR11(3)
--------->
ERF1
---------->
DOF2
--------->
DEAR3(2)
cccactaaggaaaggacatatatatatcatgggcaaaaaagtgccgccaatcaaaacacttgaaaaaaagcaggaaaaaaacttacaaatagaaccggcc
19558300
<-----------
HVH21
<---------------
AGL15
<-----------------
AGL3
----------------->
AGL2
<-----------------
AGL2
----------------->
AGL3
<-------
TEIL
<---------
LBD16
--------->
YAB1
==============================================================================
---------
ATHB12
--------->
DAG2
--------->
ARR11(3)
------
ALFIN1
---------->
DOF2
<---------
ARR11(3)
-----
ZAT18
--------->
AHL20(2)
--------->
GLK1(1)
-->
PCF2
--------->
YAB1
<---------
CCA1(2)
------->
TEIL
--------->
GLK1(2)
---
PCF5
----------->
GT1
--------------->
AGL15
--------->
AtLEC2
------->
TEIL
>
DEAR3(1)
--------->
YAB1
<---------
GLK1(1)
---------->
DOF2
--------->
WRKY12
cactcatagcccagtaataaaaaagtccatta
atggatatctcgggtcatccaaaaacccgaacccgaaccattttcgatgaagttgacgaacctgtctg
19558400
----------->
GT1
--------->
ALFIN1
<------
NtERF2
<---------
ANAC46
--------->
ARR14(2)
<---------
ARR14(2)
<------
ZmHOX2a(1)
--------->
ARR14(2)
<------
NtERF2
<---------
ARR14(2)
<---------
SPL7
<---------
AtLEC2
----------------->
AG
<---------
ANAC58
<---------
HSFB2a(2)
----------------->
AGL1
<---------
DEAR3(1)
<---------
At4g35610
<---------
ANAC58
<------
MYB46(1)
--------->
ATERF1(1)
--------->
GLK1(1)
--------
<---------
ANAC46
<------
MYB83
<---------
ANAC46
--------->
MYB52(1)
--------->
HSFB2a(2)
<---------
ANAC58
<--------
P
<---------
ANAC58
--------->
MYB52(1)
<---------
LBD16
<-----------
RAV1(1)
<-------
GAMYB
<---------
bZIP60(1)
---------->
DOF2
<---------
GLK1(1)
==============================
MADS_MADS
--------->
ALFIN1
----------->
GT1
--------->
TOE1(2)
<-------
gttttgttgcgttcttccgatttgggttggagaggaaatggcgtcgggatggggaataacgggaaacaaagggagatgctacgatttctggatggatttc
19558500
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AGI:
At2g47680.1
Description:
zinc finger (CCCH type) helicase family protein. similar to ATP binding / helicase/ nucleic acid binding [Arabidopsis thaliana] (TAIR:AT2G01130.1); similar to hypothetical protein OsJ_001122 [Oryza sativa (japonica cultivar-group)] (GB:EAZ11297.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40002.1); similar to ATP-dependent RNA helicase A -like [Oryza sativa (japonica cultivar-group)] (GB:BAE95808.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:I
Range:
from: 19552898
to: 19557975
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At2g47690.1
Description:
NADH-ubiquinone oxidoreductase-related. similar to NADH-ubiquinone oxidoreductase-related [Arabidopsis thaliana] (TAIR:AT3G62790.1); similar to NADH-ubiquinone oxidoreductase-like protein [Camellia sinensis] (GB:ABY77914.1)
Range:
from: 19558333
to: 19559428
Orientation: Forward
Links:
TAIR
MIPS
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