Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------GLK1(2)                                           --------->ARR14(2)                     <----------DOF2       <---------ARR14(2)                   ------>MYB83  --------->GLK1(2)                   ------>MYB46(1)         --------->ARR11(1)                    ----------->RAV1(1)                 --------->DREB2C(2)     ----------->ARR10                      <----------ID1         <---------AHL20(2) <------ZmHOX2a(2)<-------TEIL                     --------->ANAC58  <-------TEIL   ------->GAMYB   <-----------ARR10                            --------->ANAC58 --->ANAC58     --------->DEAR3(2)     <---------At4g35610            ---------->DOF2 --->ANAC58  --------->MYB46(3)  <---------ARR11(3)       ---------->DOF2   ---------->DOF2  ------>ZmHOX2a(2)   aaaatgcataaataaacgaccgactttgagatcaaaatctaagcagattcgacaaaacatgaaagaccaaaaaaaagagaaagcaacaagatggatcgag  19057000                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  --------->AGP1                                                  <---------ARR14(3)                                                  --------->ARR14(3)           <---------GLK1(2)                       ------>NtERF2              --------->ARR11(3)          --------->ZAT2                     <------NtERF2                <---------ARR11(3)          <---------At4g35610                    ------>NtERF2                 <---------ARR14(2) --------->ARR11(3)                   <---------ETT(2)               --------->ARR14(2) <---------ARR11(3)                   --------->ETT(2)             ----------->ARR10----------->HVH21              ----------->RAV1(2)           --------->CCA1(2)  <---------At4g35610        <-----------ARR10               <---------HSFB2a(2)    --------->At4g35610     <---------GLK1(2)--------->DEAR3(1)--------->LBD16  <<<<<<<<<TBF1        --------->At4g35610 ---------->DOF2 <-----------HVH21      --------->HSFB2a(2) <<<<<<<<<TBF1     <---------ZAT2   agagaaagagtctctaacctgtcgccaacgagtttatacatccgagaaatgagatcttcttcttcttctgacatcttcacagcttcccattcgatactac  19057100                                                --------->CCA1(2)         <---------ARR11(3)                                               <---------ARR11(3)         --------->ARR11(3)                                               --------->ARR11(3)   <---------GLK1(1)             <--           <---------MYB52(2)              ---------->DOF2          --------->GLK1(1)            <---      --------->ANAC46                 <------ZmHOX2a(2)     ---------->DOF2  <---------LBD16    <---   tcacctctgcgaaacaaacatacaaaatcagactcaaaccgatcaaaaagatatagagagaaacaaagagaaatcagaccttcggaacaagaagccttgg  19057200                                                                         --------->ANAC58                                                              --------->GLK1(2)        ---------->DOF2                                               --------->ANAC46          --------->ANAC55(1)                                   ------>NtERF2   <---------HSFC1(2)    --------->ANAC58 --------DOF2         <-----------GT1          --------->ANAC58          --------->ANAC46 ------ANAC58   <------NtERF2  <-----------GT1 --------->ANAC58          --------->ANAC55(2) ------ANAC58 <---------DEAR3(1) <---------LBD16   --------->HSFC1(2)    <---------ANAC55(2)       --   ctttgctctgtctccgtcgtcgtttatccattttttccgccttgtctgaacgaaacatcgaactaatctgaagacacgaaacacacagagaaagagagag  19057300                                          --------->TGA1a                                          <---------O2                             <---------LBD16                                          ==================================bZIP_DOF    ---------->DOF2                                          --------->O2                        <------MYB83                                          <---------TGA1a                     <---------ANAC58                                       ------>ZmHOX2a(1)                      <------MYB46(1)                                <---------ICU4                   <---------DAG2    <---------HSFB2a(2)                                --------->ATHB12        --------->YAB1        <---------ANAC58                               --------->ICU4       ----------->GT1          <---------MYB46(3)               --------->HSFB2a(2)--------->GLK1(1) <------ZmHOX2a(1)    <-----------RAV1(1) -------- -------->DOF2 <---------HSFB2a(2)<---------GLK1(1)--------->ICU4<----------DOF2   --------->HSFB2a(2)   agaaagagaataaatctcgagaaacaagaagaaatgatttcctcacgaggggaaggattaatagtagctttttttttgttgggttctcggaaaagaaaag  19057400                                                                                          --------->AHL20(2)                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                   <---------ICU4                                                                                   --------->ATHB51                                                                                  --------->ICU4                                                                                  <---------YAB1                                                                                <---------ICU4                                                                                <--------HAHB4                           ----------->GT1             <---------LBD16          --------->YAB1                      <----------ID1               <-----------GT1             --------->ICU4                    --------->DAG2             <---------AHL20(2)              --------->AHL20(2)   <                --------->ANAC58              --------->AHL20(2)             --------->YAB1     -----                --------->ANAC58             <---------YAB1               ------>ZmHOX2a(1)<---------AHL20(2)              *TSS ---------->DOF2         <---------ICU4                 <---------HSFB2a(2)   <----              <-----------------AGL1      --------->ICU4                  --------->HSFB2a(2)  <----- -->DOF2 --------->ALFIN1---------->DOF2  <---------YAB1           <---------WOX13(1) <---------AHL20(2)   agtgagagagagaggggctcgaaaaggaaaagaaaatcaaactgattattatataactgcgcatgtctgattaatcctagaataattatttatttaatac  19057500                                             <---------AHL20(2)                                             <---------YAB1              --------->ATHB51              --------->AHL20(1)                    <---------ZAT14             <---------MYB52(1)             <---------AHL20(2)         ------->TEIL   <---------ZAT6   <---------YAB1                           --------->AHL20(2)         --------->GLK1(2) --------->YAB1               --------->ATHB12                         --------->ARR14(2) ---------YAB1--------->AHL20(2)   <---------TOE2(3)     --------->At4g35610      --------->ZAT14 ---->ANAC55(2)   <---------AHL20(2)        <---------AHL20(1)         <---------ARR14(2)  <--------- -----ANAC55(2)   --------->AHL20(2)     --------->AHL20(2) ---------->DOF2  --------->ZAT14    <---- ----ICU4------>ZmHOX2a(1)  <---------WOX13(1)           <---------At4g35610 <---------ZAT14<--------   ttatcatcatcctccattatttaaatattgactgattaagaaataatataattcgattgagctaaagaaaacgaatctgtaaactgtagtgtttcactgt  19057600                                                                                                -----                                                                                              <------                                                                                            <--------                                                             --------->TOE1(3)              <--------                          <---------MYB52(1)                 --------->TOE2(3)              <--------                     ------->GAMYB                           --------->YAB1                <---------LBD16                    --------->MYB46(3)                       --------->AtMYB61          <---------ANAC58                  --------->MYB52(1)                    <-------TEIL                    <---------ANAC58             <---------ANAC46                          --------->CCA1(2)             --------->WRKY12         <-------GAMYB   <----------DOF2              <---------ARR14(2)            <<<<<<<<<<<<<<<<<        --------->ALFIN1<----------DOF2          ----------->RAV1(1)               ------>ZmHOX2a(1) --GT1  <-----------RAV1(1)                     --------->ANAC58            --------->AHL20(2)<<<<<<< -----ANAC46 <---------ANAC58                   --------->ANAC58<---------ICU4     <----------DOF2 -At5g28300  <---------ANAC58          ---------->DOF2--------->ARR14(2)   <---------AHL20(2)<-------   gtgtgtgtgtgtgttgcttccaacggcctttagttcatagagaaagaagaacgacagatacaaccataactacttattttaaatcctttgacttgcggtt  19057700  <---------ICU4                                  <----------DOF2 --------->ICU4                                  <---------ANAC58 ------>GT1                                      <---------ANAC58 -GAMYB                                          <---------ANAC46 -ANAC58                             <---------ANAC58 -ANAC46               <<<<<<<<<<AtWER      ------>ZmHOX2a(1) -ANAC58------>ZmHOX2a(1)            <---------ANAC58 <<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<AtWER <<<AtWER            >>>>>>>>>TAC1  <---------HSFC1(2)          ----------->HVH21 --MYB46(3)          <-------GAMYB  --------->HSFC1(2)  <----------DOF2                       <------   gtaaaaattcctcgtttacagacagttggagaaatagtagcttctcctctggctttgactttcgaaatgaccagtatgtcccttatatgtgttcttgttt  19057800                                  <-----------HVH21                                      --------->MYB52(2)                     <---------AHL20(2)                                                  <---------MYB46(3)                  --------->TOE2(3)  ---------->DOF2       <-----------GT1           --------->ATHB12       <-----------GT1     <-------TEIL               --------->AHL20(2)       --------->AHL20(2)  <---------AHL20(2)--------->AHL20(2)            <---------AHL20(2)     --------->YAB1  <-----------RAV1(1) ------------------ANAC81 <-----------GT1         --------->AHL20(2)  --------->YAB1<-------TEIL   ctagtttatttgctattctacattaaatatacattctgtcaaagctacttatttaaaaatataactattcaacaataacaaaaaaattcatttgttgcaa  19057900  Previous    Next  AGI:  At2g46410.1    Description:  CPC (CAPRICE); DNA binding / transcription factor. Identical to Transcription factor CAPRICE (CPC) [Arabidopsis Thaliana] (GB:O22059); similar to TRY (TRIPTYCHON), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G53200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77791.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 19056245    to: 19057414    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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