Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ANAC58                                --------->ANAC58                <---------YAB1---------->DOF2                                                     <--   --------->DAG2           --------->AHL20(2)                           <---------ANAC46         <--  ---------->DOF2           <---------AHL20(2)                           <---------YAB1           <-- ------ANAC46  --------->ARR11(3)             --------->MYB52(2)     <-------GAMYB            ------- -----LBD16    <---------ARR11(3)           <---------MYB52(1)--------->CCA1(2)       ---------->DOF2   ggggtaaagtaatccaatatcattctaaaattaaaagcaaaatgtcgttagttatacatgttagagacgagcgttgtgtttgagaaaaaaaagagttatg  17388400                                  <------MYB46(1)                                  <---------MYB46(3)                                  <------MYB83            <-----------HVH21        <---------ARR14(2)      <--------P   ----------->GT1        --------->ARR14(2)     <-------GAMYB--------->TOE2(3)      <---------ZAT18         <---------MYB46(3)         --------->ANAC46 <---------ZAT14      <---------YAB1        --------->TOE1(3) -------ANAC58      <---------ICU4--------->MYB52(2)   <---------ANAC55(2) -------ANAC58     --------->ICU4<---------AtMYB61     --------->ANAC55(2) -------ANAC46----------->GT1 --------->ATHB12       <-----------GT1 -->MYB59     --------->ANAC46--------->MYB55(2)  <---------ICU4                    <---------YAB1 >>   tcgtatagtggattcgacgtaaatattatcgatggttggtttcaaacctgaaaaattacatgtcatattgtcatcaaacatcgattttcatttgatataa  17388500                ------------>CBF         <-----------GT1     <---------AHL20(2)                              ------->TEIL    --------->AHL20(2)                              <---------AtLEC2    <---------ARR11(3)                        --------->AHL20(2)    <---------AHL20(2)                       <---------YAB1    --------->AHL20(1)                     <---------ICU4              --------->ANAC55(2)    <---------AHL20(1)                    --------->ICU4               <---------ANAC55(2)    -------    --------->ARR11(3)   --------->ALFIN1 <---------YAB1              <-------TEIL       --------->AHL20(2)   --------->AHL20(2)  <---------ANAC46 --------->YAB1            <---------ZAT6       <---------ANAC55(2) >>>>>>>>GT-3b --------->YAB1           <---------ICU4      <---------ZAT6             ----------->GT1   gaaaaatatatttacaaacacaatcgtgtgtgtgtgtatgcatcatgattatatgcatgttagtgttagagttacatattctatagaatatgtaaatagt  17388600            <---------ANAC58            <---------ANAC58            <---------ANAC46       --------->HSFB2a(1)                                                                     <-----       <---------HSFB2a(1)                                                                    <------      <-------TEIL                                                                        --------->AHL20(2)      <---------TOE2(2)                                                                   <---------AHL20(2)      <---------TOE1(2)                                                                   --------->AHL20(1)      ------->TEIL                                                                       --------->AHL20(2)      --------->SPL7                                                                     <---------AHL20(2)    <---------SPL7                                                               ------->GAMYB-------   <---------ANAC58                                                              <---------ALFIN1   <---------ANAC58<------------CBF                                   <------------CBF------>MYB83  <---------------AtSPL3                         <----------DOF2     --------->ATHB51 ------>MYB46(1)  <-----------------------TaNAC69(2)    <------------CBF             -------->ATHB1 <---------MYB46(2)  --------------->AtSPL3               --------->ATHB51              --------->YAB1 <---------MYB59  --------------->AtSPL8               --------->YAB1               <---------YAB1  <---------MYB111(1)  <---------------AtSPL8               -------->ATHB1    <---------TOE2(3)      <---------MYB55(2) <- ---->GT1  --------->MYB52(2)         <---------YAB1    ---------->DOF2         --------->MYB46(3) --   tagaagcgtacgttccttgaaaattgttcaaagtatttctattattgttttcttttgttaaagtatttctattattgtctcaaccacctaattaaattaa  17388700                                    <----------DOF2                                <---------ANAC58                                <---------ANAC46  <------ZmHOX2a(2)                  <-----------GT1                                <---------ANAC55(2)                              <---------AHL20(1)                                --------->ANAC55(2)                              <---------AHL20(2)                                <---------ANAC55(1)------>ZmHOX2a(2)             <---------ICU4                                <---------ANAC58 --------->ARR14(2)              --------->YAB1                              <-----------GT1    <---------ARR14(2)              --------->AHL20(2) ----AHL20(2)              <---------ZAT6        <---------ARR14(3)              <--------ATHB1 ---AHL20(2)             <---------ANAC58        --------->ARR11(3)             --------->ICU4 -->AHL20(2) <----------DOF2<-----------HVH21    <---------ARR11(3)             <---------YAB1 ----------GT1           <---------ANAC46        --------->ARR14(3)           --------->YAB1  ------- ------->MYB52(1)        <---------ANAC58        --------->AGP1            --------->YAB1   <--------   ataacgtctctatctctttctatggagtcgtgttacgtctttctagtttgagatcttctactacttgttttcttcaagaataataattttcgttttatat  17388800                                                                                                  ---                                         <----------ID1                                           <--                                     --------->DOF5.7(2)                                         <---                                    --------->TOE1(3)                                            ----                                    --------->TOE2(3)                                         <------                                  <---------TOE2(3)                                           -------                                  <---------TOE1(3)<---------ANAC58                        <---------DEAR3(1)                                 <---------DOF5.7(2)                         --------->ARR14(2) <----     --------->GLK1(2)         --------->DOF5.7(2) <---------ANAC58          <---------ARR14(2)------    --------->ARR11(3)        --------->TOE2(3) <------ZmHOX2a(1)         ------>ZmHOX2a(2)--------->ANAC46   <---------At4g35610        --------->YAB1  --------->ALFIN1         --------->ATHB12   <---------LBD16 ---->TBP                     --------->TOE1(3) =================================HOX2a_HOX2a <------- ---TBP             <---------At5g28300<---------DOF5.7(2)            <---------YAB1     <---------ALFIN1   atggaagatgctggtgaacatttacggtgtaacgataacgttaacgacgaggagcgtttgccattggagtttatgatcggaaactcaacatccacggcgg  17388900           --------->MYB46(3)        --------->ATERF1(1)        <------NtERF2       <---------ATERF1(1)       ------>NtERF2      --------->RAP2.3(2)      --------->DEAR3(1)      --------->RAP2.3(3)      ------->GAMYB      --------->RAP2.6(2)                                   --------->SPL7                       <---     --------->RAP2.3(1)                              ----------->HVH21                          <---     --------->ERF1                                   --------->DEAR3(1)             --------->ANAC55(1)    <---------At4g35610                            --------->TOE1(2)                 --------->ANAC58    --------->At4g35610                            ----------->HVH21                 --------->ANAC58  --------->MYB46(3)                              ------>ZmHOX2a(2)                  --------->ANAC46 ------>At4g35610                                <------ZmHOX2a(2)                   --------->ANAC55(2) -------At4g35610                               --------->GLK1(2)<-------GAMYB       <---------ANAC55(2) ------ARR14(2)                                 <---------ARR14(2)                  <---------LBD16 ----->ARR14(2)  <---------MYB52(1)            <------ZmHOX2a(1)----------->GT1   --------->ARR14(2) ---DEAR3(1)<---------ALFIN1              --------->ALFIN1----------->HVH21       <---------ARR14(2)< -->ALFIN1------>NtERF2  ---------->DOF2  <---------ANAC46<---------SPL7      <XXXXXXXXXXXXXXXXXXXXMIR837-5P --NtERF2--------->DEAR3(1)            --------->ALFIN1------>NtERF2  --------->ARR11(3)         <--- --->LBD16<---------ATERF1(1)      ---------->DOF2--------->DEAR3(2)  <---------ARR11(3)<---------ARR14(2) --LBD16--------->RAP2.3(1)     --------->AtLEC2--------->ARR14(2)   <---------CCA1(2)  --------->ARR14(2)   agctacagccgcctccaccgttcttggtaaagacatacaaagtggtggaggatccgacgacggacggggttatatcttggaacgaatacggaactggttt  17389000            <---------RAP2.6(3)            ------>NtERF2            --------->LBD16           --------->ATERF1(2)           <---------ATERF1(2)           --------->RAP2.6(2)          --------->ATERF1(1)                                                                    <---         --------->At4g35610                                                                     <---         <------NtERF2                                                                          <----         --------->ZAT2                                                                         <----         <---------ATERF1(1)                <----------DOF2                                   <------         <---------ZAT2                  <---------ALFIN1                                     -------         <---------At4g35610            ------>MYB83                             <---------At4g35610       --------->ATERF1(1)     ------>ZmHOX2a(2)                                 --------->At4g35610-       <-----------RAV1(2)    <------ZmHOX2a(2)                                  --------->ZAT2 <----    --------->ALFIN1         --------->ARR11(3)                                  <---------ZAT2 -----  <-----------RAV1(1)        <---------ARR14(2)                                 ------>NtERF2<-------  --------->ALFIN1           --------->AGP1 <---------DAG2                  --------->ANAC58 <-------  =================RAV       <---------ARR11(3)                             --------->ANAC58 -------- ------ANAC46                --------->ARR14(2)     <---------ICU4         --------->SPL7    <------- ------ANAC58     --------->ARR14(2)    -------->P--------->ANAC58        <---------MYB52(1) <------- ---------ANAC46  <---------ARR14(2)    ------>MYB46(1)                  <---------SPL7     --------- ------ANAC58<------NtERF2  <---------GLK1(1)     --------->ANAC58     <-------TEIL     <---------ICU4   cgtcgtgtggcagccggcagaattcgctagagatctgttaccaacacttttcaagcattgcaacttctctagcttcgttcgccagctcaatacttacgta  17389100  --------->ARR14(2)  <---------ARR14(2) ------ANAC55(2) ------ANAC46 -----TOE1(2) -----TOE2(2) ---SPL7 -->TOE2(2) ------>TEIL ---TEIL -->TEIL                                                                     ---------->DOF2 --ANAC46                                                                   --------->AHL20(2) --ANAC55(2)          <---------ICU4                                        <---------AHL20(2) ->ANAC55(2)          --------->YAB1                             --------->ARR14(2) --ANAC58            <---------ATHB12                 --------->ZAT18 <---------ANAC58         ------ --ANAC58<---------ZAT14        <-----------GT1       <---------ZAT14 <---------ANAC58--------->YAB1 ------>AtSPL3     --------->WOX13(1)          <----------DOF2   <---------ARR14(2)  --------->ICU4   cgtatatatgcttcactgtttcaatcagtattttaaactatttgtgtttctttgagtttactaagtgtatttgcttaattaaaggcattaatgagtgttg  17389200                                                                           ---------->DOF2        <---------YAB1                                                 <----------ID1       --------->AHL20(2)                                            --------->DAG2       --------->AHL20(1)                                          ---------->DOF2                 --     --------->AHL20(1)                                      <---------HSFC1(2)                <-----     <---------AHL20(1)     --------->MYB52(1)               --------->HSFC1(2)                <-----    --------->YAB1      --------->DAG2                     <---------ARR11(3)                  ------ ----->GT1             ---------->DOF2                     --------->ARR11(3)     <---------At4g35610   ttacaaaaatattatagggttttcgaaaagtaacgacgataagatgggaatttagtaatgagatgtttcgaaaggggcaaagagagcttatgagcaatat  17389300  Previous    Next  AGI:  At2g41690.1    Description:  AT-HSFB3 (Arabidopsis thaliana heat shock transcription factor B3); DNA binding / transcription factor. Identical to Heat stress transcription factor B-3 (HSFB3) [Arabidopsis Thaliana] (GB:O22230); similar to AT-HSFB2A (Arabidopsis thaliana heat shock transcription factor B2A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G62020.1); similar to heat shock factor [Nicotiana tabacum] (GB:BAA83710.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232) Range:  from: 17388801    to: 17389655    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version