Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             ------->GAMYB                                           --------->DEAR3(1)                                           --------->DREB2C(2)                                          <------NtERF2                                          --------->MYB46(3)                                          --------->ATERF1(1)                                          --------->DEAR3(2)                                          --------->DEAR4(2)                              <---------LBD16                              --------->LBD16                             <---------ANAC58                             <---------ANAC58                             <---------ANAC46                            ------>ZmHOX2a(2)                            <-------TEIL <---------ATERF1(1)                            <-----------------------TaNAC69(2)                           <------ZmHOX2a(2)                           --------->CCA1(2)                          <---------ARR14(2)                          --------->AGP1 ------>NtERF2                          --------->ARR11(3)                          --------->ARR14(2)--------->ABI4(1)                 ------>ZmHOX2a(1)      <---------ALFIN1                 ==================HOX2a_HOX2a                 =================HOX2a_HOX2a        ==============HOX2a_HOX2a       --------->DEAR3(1)        ==========================HOX2a_HOX2a                           <---------MYB46(3)        ------>ZmHOX2a(1) <---------ARR11(3)------>NtERF2              --------->ALFIN1        ===========================HOX2a_HOX2a--------->RAP2.6(2)--------->ATHB12     ==============================HOX2a_HOX2a--------->DEAR3(1) <---------ICU4     =============================HOX2a_HOX2a--------->RAP2.3(1)<---------YAB1     =================HOX2a_HOX2a    --------->ANAC58         --------->YAB1     ------>ZmHOX2a(1)  ----------->ARR10--------->ABI4(1)    <---------ICU4                        < -->NtERF2     ------>ZmHOX2a(2)     --------->ANAC58      --------->YAB1    --------->ALFIN1       - ----ANAC58    ----------->RAV1(2)<---------ARR14(2)    --------->GLK1(1)   <------ZmHOX2a(1)     <-- ----ANAC58  --------->ARR11(3)   --------->ARR14(2)--------->YAB1  <---------DEAR3(1)      <--------   ggctctcctcctattgatcctgaaccaagatccgtggaatcgccaccgccgaaatcagaattcatcatcatcggtggaggagttggagttggagttgttg  17105400                                                                       ----------------->AGL1                                                  ------>ZmHOX2a(2)   ===============================                                            <----------DOF2           <-----------------AG        <------ZmHOX2a(1)            --------->ABI4(2)            <------ZmHOX2a(1)   --------->ALFIN1                  --------->MYB55(2)     <---------ICU4   <---------ANAC46                  <---------MYB46(3)     --------->ATHB12    ---------->DOF2 <---------MYB46(3)                 <---------DEAR3(1)     --------->ICU4 --------->ARR14(2) ---------AtMYB61               <---------LBD16   =======================HOX2a_HOX2a -------->ALFIN1 --------->GLK1(2)  --------->ALFIN1       <---------YAB1 <---------ARR14(2) -------ANAC46 <---------HSFC1(2)   <---------AtMYB61   --------->ICU4<-----------------AGL1        - -MYB46(3)     --------->HSFC1(2)<---------DEAR3(1) --------->LBD16 <---------GLK1(1)              <-   gagtggtggaggattgaagcttctggtgataaatcgcggtggttctctttgatccgagatgatgattaggacttccgatttggaaagcgagagctagatg  17105500                                                                <---------TOE2(3)                                                                --------->ANAC46                                                          <---------------AGL15                                               <---------At4g35610        <---------TOE2(3)           <---------HSFB2a(2)  ----------------->AGL1                  <---        <---------TOE1(3)           --------->HSFB2a(2)  ----------------->AGL3  <-----------ARR10   --------->ATHB12           --------->ARR11(3)--------->ARR11(3)               --------->ARR11(3)  --------->ICU4              <---------ARR11(3)<---------ARR11(3)<------ZmHOX2a(1)              ---- =========================================================================MADS_MADS              ---- ---------->GT1     --------->CCA1(2)--------->LBD16     <-----------------AGL1  <---------ARR11(3) < -----ZmHOX2a(1)  --------->CCA1(2)<---------LBD16 ----------------------->TaNAC69(2)            <---   aggagtgattaaggtttgagagatagggatgagttcttctggagatggaagctcttcttcccatctaaggaaccaatttggattatcttctctcattcta  17105600                       --------->LBD16                     --------->At4g35610                     <---------At4g35610                     <---------LBD16                    <---------ERF1                  --------->ATERF1(1)                  <---------At4g35610                  <------NtERF2                  <-------GAMYB                  --------->ZAT2                  --------->At4g35610                  <---------ZAT2                 <---------ERF1                 <---------DEAR3(2)                 <---------RRTF1(1)                 <---------RAP2.6(1)                 <---------ATERF1(1)                 ------>NtERF2                 <---------RAP2.3(1)                <---------DEAR3(1)                <---------RAP2.6(2)               <------NtERF2              <---------ATERF1(1)              ------>NtERF2              <---------RAP2.3(1)              <---------RRTF1(1)              <---------ERF1             <---------O2             --------->ATERF1(2)             <---------ATERF1(2)             <---------DEAR3(1)             <---------RAP2.6(2)             <---------RAP2.3(2)             <---------RRTF1(3)                                   --------->ANAC58             <---------RRTF1(2)                          ==================HOX2a_HOX2a             <---------ANAC46                            ------>ZmHOX2a(2)             <---------RAP2.3(3)                       <---------AGP1          ----------->HVH21=====================================HOX2a_HOX2a          ----------->TGA1 <------ZmHOX2a(1)           --------->ARR14(2)    ----------->HVH21<------NtERF2                     <---------ARR11(3)   --------->At5g28300<---------ANAC46                 <---------ARR14(2) <---------ANAC46<---------MYB46(3)                    --------->ARR11(3) <---------DEAR3(1)<---------DEAR3(1)               --------->ALFIN1  ---------->DOF2      --------->ICU4 ------ZAT2  <---------bZIP60(1)                <---------HSFB2a(2) <------ZmHOX2a(1)      <---------YAB1 ----->ZAT2 --------->RAP2.6(3)                <---------TOE1(1)  --------->ANAC58      --------->ICU4 ----->At4g35610<---------RAP2.3(3)           <-------TEIL<----------DOF2             ----------->GT1 ---------LBD16--------->ATERF1(1)   ===========================HOX2a_HOX2a  --------->TOE1(2) ------At4g35610<---------RAP2.3(2)  <------ZmHOX2a(1)<---------CCA1(2)   --------->MYB52(1)<--------   gctgcggtgatagtgacggcggctgcggaggaagacggaggagagaggttcgaggtggatcttttggtaaggaaaagaacgaaggaagtagttattattt  17105700                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                         --------->ANAC58                                                                                         <---------ANAC55(2)                                                                                         --------->ANAC58                                                                                         --------->ANAC55(2)                                                                                         --------->ANAC55(1)                                                                                         --------->ANAC46                                                                                        <---------LBD16                            ---------->DOF2                                       --------->ANAC55(2)              --------->AHL20(2)                                                  --------->HSFB2a(2)            <---------ARR11(3)           XXXXXXXXXXXXXXXXXXX>MIR3434              <---------HSFB2a(2)            <---------GLK1(2)          <---------WOX13(1)                         <---------ANAC55(2) <---------YAB1<---------AHL20(2)    --------->ATHB12                    *TSS  <---------ARR14(2)<--- -AHL20(2)----------->ARR10<------ZmHOX2a(1)              --------->HSFB2a(2) <-------GAMYB    ------   gtgaatattggctagattttatatatggaggaaagagagtgattggctgattccatttctctcgaataatgtgttcatggggttatggaacacggaataa  17105800            <---------YAB1                <---------ICU4         --------->ICU4                  <---------ATHB12                <---------ICU4        <----------DOF2       <---------YAB1                             --------->YAB1 ----AHL20(2)               <------ZmHOX2a(1)                         --------->YAB1 ----AHL20(1)              ----------->GT1--------->YAB1           --------->YAB1                   - --->AHL20(1)         ---------->DOF2  --------->GLK1(1)      --------->AHL20(2)                  <-- ---------CBF <---------AHL20(2)<------------CBF        ----------->GT1 --------->ICU4      <-------- --->AHL20(2)--------->AHL20(2)--------->ATHB12    ---------->DOF2 ----------->GT1         <---------   attgttgagtctttattaaaaatacaaagaggataattgagaaatcataactcaaaagtagtaagaaaatagtaataatgtgagcatatgaactgtcatt  17105900           <---------DEAR3(2)           <------MYB83           <------MYB46(1)                                                     <---------AHL20(2)          --------->MYB59                                                      --------->AHL20(2)    <---------LBD16                                                           <---------AHL20(2)    <---------At5g28300                                                       <---------AHL20(1) -------->WOX13(1)                                                            --------->AHL20(1) -------YAB1  <-------TEIL                               <---------ANAC58     --------->AHL20(2) -YAB1 <---------SPL7                                    <---------ANAC58 --------->AHL20(2) --HVH21<---------MYB52(1)                      --------->AtLEC2          <---------AHL20(2)   gtcattcacggttcggttcatggcatccaaattgccagtttttgttttccatgcgaattgtttgcctctagtttttttaatttatttgtagtgactaaat  17106000          <---------TOE2(3)          --------->MYB59                                            --------->TOE2(2)          <---------TOE1(2)                                          --------->TOE1(2)          <---------TOE2(2)                               --------->AHL20(2)     --------->ICU4                                       --------->AHL20(1)   --------->YAB1                                         <---------AHL20(2)   <--------ATHB1                                         <---------AHL20(1)   <---------ICU4                  --------->ALFIN1      --------->AHL20(2)                        <-  <---------ATHB12               <---------ANAC46        <---------ATHB12                    --------  --------->ICU4        --------->ATHB51          <---------YAB1   >>>>>>>>>MYB98           ---------  <---------ATHB51      --------->YAB1          --------->YAB1 ----------->GT1   ------>ZmHOX2a(2) <-   tgcaataattcttaggtagaaaacaataatcgatagtgtgtgagtatcaattttgatcaataaattagtaacataagaattgatcgcataagaatgcgcc  17106100              --------->ATHB12           --------->bZIP60(1)           <---------bZIP60(1)         <---------DDF1         <---------RAP2.6(3)        --------->RAP2.6(2)        --------->DEAR3(1)        --------->RAP2.3(3)        <---------ETT(1)        --------->RAP2.3(2)        ----------->HVH21        --------->DREB2C(2)       --------->RAP2.3(1)                                              ----------->HVH21      <---------At4g35610                                    --------->TOE2(3)      --------->At4g35610                                    --------->TOE1(3) --------ATHB51                   --------->ATHB12           <---------DAG2              --------->TOE2(3) ->ANAC46------>NtERF2           <---------YAB1            --------->GLK1(2)  ---------->DOF2       - >ZAT18--------->DEAR3(2) --------->DAG2               <------NtERF2    <---------YAB1<---------GLK1(1) --------ATHB12          ---------->DOF2      --------->ANAC46   <---------YAB1       --------->GLK1(1)   aatagttgagccgacatcatttgaataaaaagtatatgattagattacaccgaaggcagagaaccttatgagttatgacagaaagaagaaatctcaatct  17106200              --------->ATHB12              -------->ATHB1              --------->YAB1              <---------ICU4             <---------ATHB12                                                                <-------             --------->ICU4                                                               <---------TOE2(3)             <---------YAB1                                                               <---------TOE1(3)           <---------ICU4                                                           <---------AHL20(2)           --------->YAB1                                                           --------->AHL20(2)          --------->ICU4                                                         <---------ICU4<-----        --------->YAB1        <----------ID1                                    <---------YAB1 ------      --------->AHL20(2)    <---------ICU4        --------->LBD16               --------->ICU4-------     --------->YAB1     <---------YAB1           --------->LBD16             --------->ICU4  --------   <---------AHL20(2)   --------->ICU4  --------->TOE2(3)                    <---------YAB1 <------ZmHOX2a(1)   --------->AHL20(2)   ------>ZmHOX2a(1)  ---------->DOF2                 <---------At4g35610<------ -------->TOE2(3)   <---------ZAT18     --------->TOE1(3)           ---------->DOF2<---------YAB1   tacattaaaataataatcattgtgtcctcattaagacgaaaaccataaatcccgaatatttctctaagtttaaagagagatgattattaattaaggatat  17106300  Previous    Next  AGI:  At2g40970.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10760.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABN09175.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 17104628    to: 17105773    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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