Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------ARR11(3)                                      <---------CCA1(2)                  <-----------GT1 --------->YAB1                                   <---------AHL20(1)           --------->AHL20(2)  --------->AHL20(1)                       <---------AHL20(2)                       --------->ATHB51    <---------AHL20(1)                       --------->ATHB12--------->ARR11(3)       <---------ICU4      --------->AHL20(2) <---------TOE2(3)    --------->AHL20(2)                        <---------AHL20(2)  <---------AHL20(2) --------->DOF2       <---------AHL20(1)          <-----------GT1   <---------AHL20(2) <---------YAB1 --->AHL20(1)         <---------AHL20(2)     <----------DOF2   --------->ICU4   <---------AHL20(2) ----AHL20(1)         --------->AHL20(1)     <---------DAG2  <---------ICU4 <----------DOF2 -AHL20(2)    --------->ZAT6       --------->AHL20(1)       --------->ICU4  <---------DAG2 >AHL20(2) <---------ZAT18         <---------ARR11(3)--------->AHL20(2)  <---------AHL20(2)   attaaagtttttgttcacactaaatttattgactcaatatatatctactttataactaaatactaattatttcatttactttttattttattaataatct  17016700                    <---------ANAC58               <---------ANAC58               <---------ANAC58         --------->AHL20(1)         <---------AHL20(1)         --------->ARR11(3)                          --------->ARR11(3)                           <--        <---------AHL20(2)                           <---------ARR11(3)                     ---------      --------->AHL20(2)                          <---------AHL20(2)                        <--------      <---------AHL20(2)                <---------ANAC46                         --------->ARR14(2) -    --------->AHL20(2)               <---------RAP2.6(2)      <-------TEIL       <---------ARR14(2) <    <---------AHL20(2)             <-----------GT1--------->AHL20(2)   --------->AHL20(2)   ---------  --------->AHL20(2)<---------ANAC58<---------LBD16 <---------CCA1(2)  <---------AHL20(2)   <--------   acatatatatatatattgtttgtcttgtttattgtttttgcggtttgtatatttatatctcatattcatacaattttttagtatatatgcttaattaatt  17016800                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                      <---------AHL20(2)       <-----                                                                  --------->AHL20(2)           ------         <---------RAP2.6(2)                                      <---------AHL20(2)           <-----       <-----------RAV1(1)                                       --------->AHL20(2)            ------ <------ZmHOX2a(2)         <-----------GT1                  <---------DAG2          <---------AHL20(2) -------YAB1           <---------YAB1 --------->AHL20(2)    <----------DOF2         <---------AHL20(1) >AHL20(2)            <---------AHL20(1)             --------->AHL20(2)             --------->AHL20(2) -AHL20(2)  <---------ANAC58    <----------DOF2      <---------AHL20(2)        --------->AHL20(2) -------->ARR11(3)    <---------AHL20(2)      <---------At4g35610<---------AHL20(2) --------->AHL20(1) ---------ARR11(3)  <---------YAB1    <---------AHL20(2)<---------YAB1--------->AHL20(2) <---------AHL20(2) >AHL20(1)  <---------ANAC46 <---------RAP2.6(2)     <---------YAB1  --------->AHL20(2)  <-----------GT1 -AHL20(1)  <---------ANAC58<---------LBD16  ------->TEIL<-----------GT1       <---------AHL20(2)   aagatcgaattgtggcttgtttattatttttgcggtttatttatatgcatctcatattattacttttttaaattaatcgattaaaatttattaacttacg  17016900 <---------AHL20(1) --->ANAC58 --->ANAC58 ----ANAC58                           <---------AHL20(2)                              <---------AHL20(2) --->ANAC55(2)                        --------->AHL20(2)                             <---------AHL20(2) ----ANAC58                 --------->YAB1                                           <---------AHL20(1) --->ANAC55(1)       --------->AHL20(2)                               ---------->DOF2--------->AHL20(2) ----ANAC55(2)       <---------AHL20(2)       <----------DOF2<---------AHL20(2)      --------->YAB1 --->ANAC46      --------->AHL20(2)------->TEIL      --------->AHL20(2) ----------->GT1   taacatatttgatattgcataaattaaaaatcatatgtatataattctctttagtttaaattttaaaatgaataaagaaaaaaacaataaaatttgaaaa  17017000                                                               ------>MYB46(1)                                                               <---------TOE2(2)                                                               <---------TOE1(2)           <---------GLK1(1)                                                             --------->TOE2(2)       <------MYB46(1)                                                             --------->TOE1(2)       <------MYB83----                                                <---------SPL7 ------>MYB83          <---------MYB46(3)                                              <---------------AtSPL3                --------->MYB59                                             <-----------------AGL1                 <---------AtMYB61                                       ------->TEIL <---------HSFB2a(2)           <---------MYB52(1)                  ---------->DOF2   <---------YAB1--------->SPL7              <---------LBD16  <-----              <----------ID1   --------->YAB1<------------------SPL14<---------AtMYB61<-------GAMYB   ctgaaaaccttttaaaacgaaaaagaatggctaagatgatgaatcggtctcgtacgggaaacacctacgttttggtttagtccggtttggttgaattccc  17017100                                                              --------->ANAC46                                                        <---------SPL7                                                        <-----------HVH21                                                        ------>NtERF2                                                       --------->DEAR3(1)                                                       --------->RAP2.6(2)                 <---------PCF2                        --------->RAP2.3(2)                    <------                <---------ANAC58                      --------->ORA47(2)                   <---------ALFIN1                <---------ANAC58                      --------->ATERF1(1)                  --------->DEAR3(1)       <---------ANAC46                               --------->RAP2.3(1)                 ------>MYB46(1)       <-----------------AGL3                        --------->LBD16                      ------>MYB83       <---------ANAC58                             --------->ANAC46                     --------->ABI4(1)       <---------AtLEC2                         <---------GLK1(1)   <---------MYB46(3)  <---------ALFIN1       <---------ANAC58   *TSS                  --------->GLK1(1)--------->DEAR3(1)     --------->AtMYB61   <----------DOF2   ------------>CBF  --------->ZAT6------>NtERF2 <------NtERF2        --------->DEAR3(1) ----->LBD16   --------->MYB59       >>>>>>>>>>>>>>>>>LFY --------->SPL7               --------->MYB46(3) ----LBD16  <------------CBF        <-----------GT1<---------LBD16------>NtERF2   --------->YAB1  ---   agagactttgcttgaattgggtccccaatgctacggttttaccactggagatttccgccgtccctcgccgtcgttagaatgctctcatcaccaccccctc  17017200                            <---------ANAC58                            ----------->GT1                            <---------ANAC58                            <---------ANAC46                           <------NtERF2                           --------->ATERF1(1)                          ------>NtERF2                          <---------ATERF1(1)                          <---------RAP2.3(1)                          <---------ERF1                          <---------RAP2.6(1)                          <---------ORA47(2)                          <---------DEAR4(2)                          <---------RRTF1(1)                         <---------ANAC46                         <---------RAP2.3(3)                         <---------DEAR3(1)                         <---------RAP2.3(2)                         --------->DEAR3(1)                        <---------At4g35610                        <---------ABI4(1)                        --------->At4g35610                        <------NtERF2                        --------->DEAR4(2)                        --------->RAP2.3(1)                        --------->DREB2C(1)                        --------->ATERF1(1)                       <---------ATERF1(1)                       <---------RAP2.6(1)                       <---------RAP2.3(1)                       <---------RRTF1(1)                       <---------ORA47(2)                       <---------ERF1                       <---------DEAR4(2)                       ------>NtERF2                      --------->ATERF1(2)                      <---------RAP2.3(2)                      <---------RRTF1(2)                      <---------RRTF1(3)                      <---------RAP2.3(3)                      <---------ATERF1(2)                      <---------DEAR3(1)            --------->ARR14(2)                      --------->DEAR3(1)        <-------GAMYB                     --------->ATERF1(1)       <---------DEAR3(2)                    --------->LBD16            <------MYB83                    <---------RAP2.3(1)        <------MYB46(1)                    <---------ATERF1(1)       <---------MYB46(3)                          ------->GAMYB                    ------>NtERF2             --------->MYB55(2)                        ------>MYB83     <---------ALFIN1<---------ABI4(1)        <---------DREB2C(2)    <-----------GT1    -------->P ---ALFIN1         <---------DEAR3(1)         <---------DEAR3(1) --------->LBD16        ------>MYB46(1) --->ZmHOX2a(1)   <---------LBD16<---------ARR14(2) <---------ARR14(2) <---------YAB1  <---------ALFIN1   ctcactcacactctccattctccggcggcggcgtgaattcgaactcagtcggtggaaactccaaacccgagttacaattccctcaatcccaaccccataa  17017300                                      <---------ANAC58                                      <---------ANAC58                                      <---------ANAC46                                     <------NtERF2            --------->LBD16                                    ------>NtERF2           <---------LBD16                                <---------DEAR3(1)   <------NtERF2                                --------->ANAC46    --------->LBD16                           <<<<<<<<<<GATA-1        --------->DEAR3(1)                          <---------GLK1(1)       <---------LBD16                ------>ZmHOX2a(1)   <---------MYB46(3)   <----------DOF2            ------>ZmHOX2a(1)  <---------LBD16  ------->GAMYB--------->ANAC46       ------>ZmHOX2a(1)  --------->GLK1(1)     --------->ANAC46   actctcttcctctccttcctcttctctgaaatccacggtggcttgttcaaacgccggagctatacggagaagcatggctactgtttctcaggcattctca  17017400                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                       --------->LBD16      ---------                                                                       ------>ZmHOX2a(1) ============                                                        --------->ARR14(2)               <------ZmHOX2a(1)                      --------->ARR14(2)                <---------GLK1(2)             <---------LBD16               --------->ATHB12     <-------GAMYB       <---------ARR14(2)      <---------YAB1   <---------ZAT14    <---------ARR14(2)     <-------TEIL            ----------->RAV1(2) ============   gagagaacagagtctattgattcggatttaggctcgctcgttgtagtttcattctacaaattcgctgattttcctgagcatgctgatttcaggaagcctc  17017500     ------>ZmHOX2a(2)    --------->GLK1(1)    <---------GLK1(1)    <------ZmHOX2a(2)   --------->ARR11(3)   <---------ARR11(3)   <-----------ARR10   <---------ARR14(2)   --------->ARR14(2)                                  --------->ARR11(3) -HSFB2a(1)                        <---------CCA1(2)   <---------GLK1(2)      ----------->GT1 -HSFC1(2)                   --------->ARR14(2)        <---------ARR11(3)    --------->DAG2 >HSFB2a(1)               <---------ANAC58           ----------->ARR10   --------->ANAC46      <----- >HSFC1(2)     --------->DAG2<---------ARR14(2)   --------->ALFIN1       --------->ANAC58  <---------ANAC58 ===========HOX2a_HOX2a   <---------ANAC58    ---------->DOF2            --------->ANAC58  <---------ANAC58 ==========HOX2a_HOX2a    <---------ANAC46  --------->YAB1            <---------ETT(2) <----------DOF2   tcaaggatctctgcgaaaaattggtatggcgtttcttctatctcattcaaaagtgtagatttttagtgtctgtctacgaaaggttaagtctttacttacg  17017600  Previous    Next  AGI:  At2g40760.1    Description:  rhodanese-like domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82942.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 17017126    to: 17019145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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