Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   ------>MYB83                                                 ------>MYB46(1)                                                 -------->P                                                --------->MYB55(1)                                               <---------MYB46(2)                                               <---------MYB111(2)                                               --------->AtMYB61                          <-------GAMYB                                               <---------MYB111(1)                    <---------ALFIN1                                   <----------DOF2                               --------->ARR14(2) -                        <---------ZAT14        --------->MYB46(3)               <---------GLK1(2)<---        ---------->ID1 <---------REM1(1)       <---------MYB59                  --------->ARR14(2)---       <-----------HVH21--------->ZAT14<-----------GT1                          <---------ARR14(2)--- ----------DOF2        <---------ZAT6 <-----------GT1                         --------->LBD16   <---- ---------DAG2  <----------DOF2  ------>ZmHOX2a(1)                          <---------LBD16     -----   aactttttttgtcacttactttctagtgtagcatcctcttttacccttaccaacccctaatctcttcttcttactctcaccggaatctccaccgttgcaa  17009100                                                                                 ---------->DOF2              <---------ARR11(1)                                         <---------ANAC46              <-----------ARR10                                         <------NtERF2          <------NtERF2                                                 --------->ATERF1(1)        --------->DEAR3(1)                                             <---------ATERF1(1)        <---------DEAR3(1)                                            --------->DEAR3(1)       --------->ATERF1(1)                                            ----------->HVH21      <---------ATERF1(1)                                            <---------------------WRI1     --------->ARR14(2)                                              <------NtERF2     <---------ARR14(2)                                              --------->ATERF1(1)   --------->LBD16                                  <---------DEAR3(1)<---------DEAR3(1) <---------LBD16--------->YAB1                     <------NtERF2     --------->RAP2.3(1) -------->MYB52(1)    <---------ALFIN1             <---------------------WRI1 <------ZmHOX2a(2) ------MYB52(2) <---------ICU4                    ------>NtERF2     <---------RAP2.3(1) ---->GAMYB--------->DEAR3(1)                    <---------DEAR3(1) <---------DEAR4(2) -------->HVH21--------->HSFB2a(1)            ----------->HVH21     <---------ATERF1(1)     <-------- -----At4g35610--------->HSFC1(2)          --------->TOE1(2)       <---------DEAR3(1)       --------- ---->At4g35610<---------ATHB12          ------->TEIL  --------->ALFIN1------>NtERF2  --------->GLK1(2)   ctcaccggagtcgccgaatcatccccacatgaagcattccatgaaccctcgacggcgatggggacagagacggcgacgggatcaaaagaatcaagaaccg  17009200                        <------ZmHOX2a(2)                       <---------ARR14(3)                       --------->ARR11(3)                      <---------ARR14(2)                       --------->ARR14(3)                 --------->MYB52(1)                       <---------ARR11(3)                --------->AtMYB61                       <---------AGP1                 <---------PCF5                       --------->AGP1              ------>ZmHOX2a(2)                       <---------ARR14(2)         <------ZmHOX2a(2)                       --------->ARR14(2)        <---------ARR14(2)                 ------>ZmHOX2a(2)               <---------ARR11(3)            --------->LBD16                <------ZmHOX2a(2)                --------->ARR14(3)           --------->ANAC58               <---------ARR14(2)                --------->ARR14(2)           --------->ANAC58               --------->ARR11(3)                <---------AGP1--------->ARR14(2)               --------->ARR14(2)                <---------ARR14(3)      ----------->HVH21               <---------ARR11(3)                --------->ARR11(3)   ------->TEIL             <---------HSFB2a(1)              ------->GAMYB<---------LBD16 <---------ARR14(2)        <---------TOE2(3)------>ZmHOX2a(2) --------->MYB52(1)--------->LBD16 <---------LBD16 -ARR14(2)   --------->HSFB2a(1)    <---------At4g35610  <---------ALFIN1--------->ANAC46 >ARR14(2) ---------->DOF2          --------->At4g35610 --------->MYB46(3) --------->ARR14(2)   atatagttttatggaaagatcccaagatcttagacatgagctcatcaacgggatctggaccaccggaaactgaacccgacccggaaacaagacgggtctc  17009300                                                                                              <------                                                                                            <--------                                                                                       <----------DOF2                                            <---------ZAT2                      --------->ETT(2)                                            --------->At4g35610                 <---------ETT(2)  <--                   --------->ALFIN1         --------->ZAT2                   <------MYB83  <---------             <--------P               --------->At4g35610                    <------MYB46(1)---------      <---------SPL7                  <---------At4g35610            <---------HSFB2a(2)   ==========    --------->ALFIN1                 --------->GLK1(2)  <---------ARR14(2) <--------P  <---------DAG2    <---------------AtSPL8   ---------->DOF2<---------At4g35610      --------->HSFB2a(2)   <---------   atcgatgtggtactggttagagtgttgatgagaaaggagaagctgaagctgagtagcgaattcatagccttcgacaagttggtcgacaacttttctcttt  17009400     <---------ANAC58     <---------ANAC58     <---------ANAC46                                         <---------DAG2     <---------ANAC55(1)                                      --------------->AGL15  <---------GLK1(1)                                        <-----------GT1           --------->ATHB12 ----DOF2 ----------->GT1                               --------->ANAC55(2)         <---------YAB1 -------AGL15                                        ------->TEIL    <---------TOE1(3) -------TOE2(3)        --------->ARR14(2)     <-------TEIL ------->TEIL             --------->ICU4 --------AGL3          <---------ARR14(2)    --------->CCA1(2)<----------DOF2     --------->YAB1 ------>AGL15  <---------YAB1           ---------->DOF2 <---------ANAC55(2)      <---------YAB1 =============================================================================MADS_MADS --------AGL2<-----------GT1  <---------AHL20(2)  <---------ATHB12   <---------TOE2(3)   atggatttcgtgttgttactattcgaatccatttttttctcacaaagatacaatgaatatgtaactttttttaggtttttagtatgatgatttgagaatg  17009500                                        <-----------GT1                                    <---------RVE1(1)                          ---------->DOF2                                   --------->ARR11(3)                    <---------ANAC58     <------                   ---------->DOF2 <---------ARR11(3)                    <---------ANAC58     <------                <---------ZAT6     <---------GLK1(2)          ---------->DOF2 <------ZmHOX2a(1)      ----------->GT1     ----------->GT1     *TSS ----------->GT1   <---------At4g35610  --------->CCA1(2)   aagaaatgttgtaatatagtggaaagagaagaaaatagattttttctcttgatcagaaaaaaatcaaaggaagatgcttaggaaagagagagagatgctt  17009600                                         ------>MYB83                                       ------->GAMYB      --------->YAB1                   --------->TOE2(2)                             ----------->GT1     <---------YAB1                   <---------MYB55(2)                           ---------->DOF2    --------->AHL20(1)                <---------MYB52(2)                     --------->ATHB12    <---------AHL20(1)           --------->ANAC58    ------->TEIL            --------->ATHB51    <---------AHL20(2)           --------->ANAC58 <---------YAB1            <---------YAB1    --------->AHL20(2)    --------->DAG2 ------>MYB46(1)                    --------->ICU4   --------->YAB1   ----------->GT1   --------->MYB46(3)               ----------->GT1 ---ANAC58      ---------->DOF2---------->DOF2 --------->ICU4         <---------TOE2(3) ---ANAC58 ------->TEIL  ---------->DOF2--------->MYB52(1)            <---------TOE1(3)    <---------   atgcattataatgaacatgaaagggtataaagggaaagtaaccaacgtagttatgaatttagtcatggatttgaggttataattggaaagttataactta  17009700                                                                                             <------MYB83                                                                                             <------MYB46(1)                                                                        --------->SPL7      <--------                                                                       ----------->HVH21    ---------                            <---------ANAC58                          --------->LBD16      <---------ANAC46                            <---------ANAC58                         --------->ANAC55(2)--------->ALFIN1                            <---------ANAC46  <---------ANAC46       --------->ANAC46   <---------AtMYB61                     <---------ARR11(3)       <---------bZIP60(2)   <---------LBD16   <---------ANAC58             <---------ANAC46    <-----------HVH21      --------->TGA2(1)             <---------ANAC58             <---------ANAC58   --------->bZIP60(1)     <---------bZIP60(1)           <---------ANAC46             <---------ANAC58   <---------bZIP60(1)     --------->bZIP60(1)  <-------MYC3<------MYB83   <-----------GT1   --------->ARR11(3)   <---------TOE2(3)   --------->MYB46(3)<---------MYB46(3) <- --GT1--------->MYB46(3)<----------DOF2  --------->YAB1 <---------TGA2(1)    ------->MYC3<------MYB46(1)   tctattcacccattggcttgcaagagctttgcttatgtcacattgatgatgtggaatgacatcacccatctccgtaacacgtttgatggcttggtgggta  17009800                               --------->AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)                           --------->AHL20(2)                           <---------AHL20(2)                       --------->AHL20(2)                                  <---------AHL20(2)                       <---------AHL20(2)                                  --------->AHL20(2)         <----------DOF2  --------->AHL20(2)                          --------->ARR11(3)     <-----------GT1<---------ARR14(2)                                <---------GLK1(2)          ----   <-----------GT1  --------->ARR14(2)                              ----------->ARR10            <--- -MYB46(3)      <---------LBD16<---------AHL20(2)         <---------MYB111(2)                   ----- >MYB55(2)      --------->HSFB2a(2)<---------ICU4         --------->MYB46(3)                    <---- --------AHL20(2) --------->LBD16  <---------AHL20(2)<------ZmHOX2a(2)<---------ARR11(3)       <-----   ttttttttctcctttcttcgcggatttatttaattaattaatgctcatgaaaacgatccaacaacttggttagatttttaaatgttttttgcgaaaaatt  17009900                                                                     --------->ANAC46                                                                     --------->ANAC58                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                     <---------AHL20(1)                                               --------->AtLEC2      --------->ANAC58 ----->AHL20(1)                        <---------AHL20(2)        --------->SPL7 ------AHL20(2)                     --------->AHL20(1)     <-----------GT1 ---->AHL20(2)                      --------->AHL20(2)  <---------YAB1                         ------ -----AHL20(2)       ----------->GT1<---------AHL20(1)<---------AHL20(2)                ---------->DOF2 ----AHL20(2)    ---------->DOF2    <---------AHL20(2)--------->AHL20(2)       <----------DOF2-------   attttgtttttatcttggagaaagagttatataactaatattttatgacattcaaattatttttcagtaccacgaaattcactttcaagggaaagaacca  17010000  Previous    Next  AGI:  At2g40750.1    Description:  WRKY54 (WRKY DNA-binding protein 54); transcription factor. Identical to Probable WRKY transcription factor 54 (WRKY54) [Arabidopsis Thaliana] (GB:Q93WU8); similar to WRKY70 (WRKY DNA-binding protein 70), transcription factor [Arabidopsis thaliana] (TAIR:AT3G56400.1); similar to elicitor-induced DNA-binding protein homolog [Matricaria chamomilla] (GB:BAA87069.2); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 17007532    to: 17009546    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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