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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                  <-
                                                                                                  --
                                                                                                  <-
                                                                                                  <-
                                                                                             -------
                                                                                             <------
         <---------HSFB2a(2)                                                                ------>MYB46(1)
         --------->HSFB2a(2)                        --------->ARR11(3)                      --------
    <-------TEIL                             <---------ARR14(2)                             ------>MYB83
<---------TOE2(2)                            --------->GLK1(2)                  --------->ICU4    --
<---------TOE2(3)                            --------->ARR14(2)   <----------DOF2     --------->GLK1(1)
<---------TOE1(2)                        <---------HSFB2a(2)     <---------ANAC58  <---------YAB1<--
----CCA1(2)                              --------->HSFB2a(2)     <---------ANAC58--------->YAB1  <--
 
tcttaggttcttacagaaaactcttaactacatgcttcttaggtcgagaatatgttatcttgtcgagtgctttctcaaatgcaattacgatttccaacca  16988900
--------ARR14(2)
------->ARR11(3)
--------ARR11(3)                                           <---------AHL20(2)
----------ARR10                                            --------->AHL20(2)
-->MYB46(3)------->GAMYB                               <---------AHL20(2)                        <--
---ATHB12 --------->MYB46(3)                         --------->ANAC58                      <--------
>P   --------->ANAC46   --------->LBD16              --------->ANAC58                  ---------->ID1
------->ARR14(2)       --------->ANAC46              --------->ANAC55(2)           <----------DOF2--
-------CCA1(2)        <---------LBD16            <---------HSFB2a(2)       --------->TOE2(3)     ---
-------GLK1(2) <----------DOF2          <---------MYB52(1)--------->ICU4<---------GLK1(2)-----------
 
gtatctcgacacaaccatctttttctccgcagttttatcaacagttagcattccataagtaattttttggcttcatattcttaattctttttccctttac  16989000
     <---------ZAT18
-------At4g35610
--DOF2
------->AGP1  --------->YAB1            ----------->RAV1(1)
------>At4g35610                 <-----------RAV1(1)
---->AGL15  --------->ARR11(3) <----------DOF2                 --------->AtMYB61
 
agctctagtgccatttatcttgatatatcgaagtctttgttggccacattgaagaaaacgtttcgaccatcaaacaagttccatgaggcttctcaaatag  16989100
                                               --------->DAG2          ------>ZmHOX2a(2)
                                             ---------->DOF2          <------ZmHOX2a(2)
                                          <------ZmHOX2a(2)          <---------ARR14(2)
                                      ------>ZmHOX2a(1)              --------->ARR14(2)
                                    ----------->RAV1(2)              <---------ARR11(3)
                                   ==============HOX2a_HOX2a         --------->ARR11(3)
                      --------->ANAC46<---------HSFB2a(2)          ----------->ARR10          ------
                      --------->ANAC58--------->HSFB2a(2)        ---------->DOF2           <-------GAMYB
             <---------At4g35610   ------>ZmHOX2a(1)        <------NtERF2              =============
             --------->At4g35610  <---------ALFIN1         ------>NtERF2               <-----------RAV1(1)
             <---------ZAT2   <---------At4g35610         --------->ETT(2)            <------------AtMYB77
             --------->ZAT2   --------->At4g35610         <---------ETT(2)          ------->TEIL
          --------->MYB46(3)<xxxxxxxxxxxxxxxxsmallRNA(i) ---------->ARF1--------->TOE2(3)<---------AtMYB61
         -------->P   --------->ANAC58--------->LBD16   <-----------HVH21------>ZmHOX2a(1)<---------MYB46(3)
 
cctccatactctaaccagctcatacacacaatcagctcctcctggatcaaaaggtcccttgtcgccagtaaagatcctaaacccatgtaactgtggttgc  16989200
                                         <---------REM1(2)
                                <---------ZAT14
                                --------->ZAT14
                                <---------ZAT18
                                --------->ZAT18
                              <---------LBD16
                             <---------ANAC58
       ----------->RAV1(2)   <---------ANAC58
  ------->GAMYB        <-----------------AGL1
 --------->MYB46(3)  <-----------GT1     --------->ZAT14
-------->P        <----------DOF2      --------->ETT(2)                                       ------
--->ZAT18------>ZmHOX2a(1)<----------DOF2<---------ZAT14                                      <-----
===================RAV<-----------GT1  <---------ETT(2)  <<<<<<<<<TBF1                     <--------
 
actaaccatctcctgcttctccttttaccctttcgcgcactgtctacactgttcatcttcttcttctctgcatcatagacagcccttctccatattacct  16989300
                                                   --------->TOE2(3)
                                                 <---------ATHB12    --------->ANAC46
                                              <---------MYB46(2)     --------->ANAC58
                                         --------->YAB1              --------->ANAC58
                                        <---------YAB1 --------->ANAC55(2)  --------->ANAC58     <--
                              <---------ARR11(3)------>MYB46(1)    <---------ALFIN1              ---
                              --------->ARR11(3)------>MYB83  --------------->AtSPL8             <--
   --------------->AGL15 ------>ZmHOX2a(1)    <---------MYB59 --------------->AtSPL3             <--
--->TOE2(3)           ---------->ID1    <---------ATHB12      <---------------AtSPL8   <----------DOF2
----MYB59     <---------HSFC1(2)    ------------>CBF   <---------ANAC55(1)  --------->ANAC58  ------
---GT1        --------->HSFC1(2)  *TSS--------->YAB1   <---------ANAC55(2)---------->DOF2   --------
 
tactcacccctaagagaaccatcttgtcctcaaggtctcaacaatgataccaaacattaagtgttgatgtacaccccaaaagccaacttccttttaaaag  16989400
   <----------ID1
 ---------->DOF2
-------ANAC58
-------->GT1                                                                                  <-----
-------ANAC58     --------->YAB1                                                      --------->YAB1
-------ANAC46    <---------ATHB12                                                 <------ZmHOX2a(1)
--->DAG2     ------------>CBF                                                  <---------HSFB2a(2)
-->DOF2---------->DOF2                    ---------->DOF2                      --------->HSFB2a(2)--
 
gcgtaaaagacaaagcttcaatgatatatagtcaggctctgtttcaaaagttcaaaggctcaatactattttgttaacatgtctaggaatcacaaaatgc  16989500
                                                                                    <---------ZAT18
          ---------->DOF2              --------->YAB1                   --------->YAB1
--TEIL<---------TOE2(3)               <---------ATHB12           --------->ZAT14    --------->ZAT18
------->YAB1                        --------->WOX13(1)      --------->MYB46(3)    --------->ANAC46
 
atcataactaagataaagagtgagcatcaaaaacaatttcaatcaaatcccatcacaaaattgaccactgaagaatcaaaaacagaggccacttagtcaa  16989600
                                                              --------->ANAC58
                                                              --------->ANAC58
                                    <----------DOF2       --------->ANAC46
                                  --------->At4g35610  ------>ZmHOX2a(1)
                           <---------ALFIN1        ---------->ID1  ---------->DOF2
                         <---------ALFIN1      ------>ZmHOX2a(1)------->GAMYB
                     ------->TEIL <---------At4g35610 <---------ANAC58       <---------YAB1
                     --------->ARR14(2)       --------->TOE2(3)--------->MYB46(3)  <---------ANAC46
                     <---------ARR14(2)--------->ZAT6 <---------ANAC58     <<<<<<<<<<<<<<<<<LFY  ---
 
aaaaactctgaaactccataaacgaatcccactcttcagctttcactatcctttgttccttacacaaccaaaaagacattacaatggtgtttattagaag  16989700
                                                                              --------->ARR14(2)
                                                                              <---------ARR11(3)
                                                                    --------->ANAC46
                                                                   ------>ZmHOX2a(1)--------->At4g35610
                                                                   <---------HSFB2a(2)        <-----
                                                                   --------->HSFB2a(2) --------->At4g35610
                                                                  XXXXXXXXXXXXXXXXXXXX>MIR2111A*
                       <---------ATHB12              ------>ZmHOX2a(1)        --------->ARR11(3)
                 --------->ANAC58       <---------ANAC46      --------->TOE1(1)     <---------At4g35610
                 --------->ANAC58 --------------->AtSPL3      --------->TOE2(1)--------->CCA1(2)
------->DOF2 --------->AtLEC2     <---------------AtSPL8     ------>ZmHOX2a(1)<---------ARR14(2)
 
taaagtttcaaaatccatggaagccattgattctatagaggtaccttgtaatactcctcgagtcctcgtcctcgaaatgaagatttgagcagatgggctt  16989800
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AGI:  At2g40711.1   
Description:  unknown protein
Range:  from: 16988769    to: 16989335    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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