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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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          --------->ATHB12
         <---------YAB1
---------TOE2(3)
---------TOE1(3)                                                                       --------->RVE1(1)
------->MYB52(1)                                         ------->TEIL                 --------->ARR11(3)
--------DOF5.7(2)                                     <---------YAB1                  --------->GLK1(2)
------MYB52(2)                                  ------->TEIL                          <---------ARR11(3)
-----At4g35610                                 <---------GLK1(2)                     <---------GLK1(2)
---->At4g35610                                 <---------CCA1(2)                <-----------GT1
 
ctaacgatagagatgattcgaagtgagttttgtaatcgatttttaggcctgaatctcatgaatgtgaattgttcataaacattttacaaaatctctgtaa  16983500
                                                <---------ANAC58
                                                <---------ANAC46
                                                <---------ANAC58
                                              --------->ZAT18
                                              --------->ZAT14
                                --------->ARR11(3)                                       <---------LBD16
                       <---------YAB1         <---------ZAT14                  ------>ZmHOX2a(2)
                  <---------ICU4--------->GLK1(2)                            --------->ARR11(3)
                  --------->YAB1<---------ARR11(3)                           <---------ARR11(3)
                <---------AHL20(2)           --------->ALFIN1             <---------TOE2(2)
               --------->YAB1   <---------ARR14(2)                        <---------TOE1(2)   ------
        --------->REM1(1)       --------->ARR14(2)--------->ALFIN1     <---------ANAC46<----------DOF2
 
atttttctcttacatctataaaaatgatgtttcagtatcttgtttagagtggagtgtggaatttggaataggcttcgtatgatcttcagactttcggagc  16983600
                                     -------->P
                                     ------>MYB46(1)
                                     --------->MYB52(1)
                                     ------>MYB83
                                    --------->MYB52(1)
                                    ------>MYB83
                                    ------>MYB46(1)
                                   ----------->HVH21
                                  <---------MYB55(2)
                                  --------->MYB46(3)
                                 --------->ANAC58
                                 --------->ANAC46
                                 --------->ANAC58
                               <---------ALFIN1
                              <-------TEIL
                              --------->SPL7                     ---------->DOF2
                          <---------------AtSPL8             --------->At5g28300
                         <---------ANAC46                   --------->TOE2(3)        ------------>CBF
                      --------->ARR14(2)                    --------->TOE1(3)     --------->AHL20(2)
  --------->CCA1(2)   <---------ARR14(2)----------->GT1     ----------->GT1   --------->AHL20(2)
>NtERF2            ----------------->AGL1            --------->TOE2(3)   <------ZmHOX2a(2)
 
catggatataagtatgggtgtttcaaattcgggtacacccaaccggtttaatccaaacttaaaccgtaaaaagccgatcaaaaaaataaacaatgcgcat  16983700
                                                  --------->ANAC55(2)
                                                  <---------ANAC58
                                                  <---------ANAC55(1)
                                                  <---------ANAC55(2)
                                                  <---------ANAC58
                                                  <---------ANAC46                         <-------GAMYB
                                                 <-----------------------TaNAC69(2)      <------NtERF2
                                                <---------TGA2(2)                     <------NtERF2
                                               ----------->TGA1                     <---------bZIP60(1)
                                               ----------->HVH21                    --------->bZIP60(1)
                                              <-----------HVH21                     <---------ANAC46
                                          <---------DOF5.7(2)                    --------->ALFIN1
                                        --------->DOF5.7(2)            ------------>CBF<---------DEAR3(1)
              --------->PCF2          --------->ANAC58      <------NtERF2    <---------ZAT14   <----
             <-----------TCP11(1)     --------->ANAC58     ----------->GT1   --------->ZAT14<-------
<----------DOF2   ------------>CBF<-----------RAV1(2)    <------ZmHOX2a(1)<------------CBF<---------MYB46(3)
 
gggctttgaagttgagaggcccacaatttttgaaggctcagacgtaaacggtgacgtataggaggcaaaacccttgcaattgcagtgtcgtcgtcgttga  16983800
                                       <---------ANAC46
                            --------------------->WRI1                       <---------------------WRI1
                          --------->ARR11(3)   --------->YAB1            --------->MYB52(1)       --
                --------->ANAC58       <---------ANAC58                --------->MYB46(3) --------->ANAC58
-----ANAC46     --------->ANAC58       <---------ANAC58              ----------->RAV1(1)  --------->ANAC58
--MYB52(1)    ---------->DOF2     --------->MYB52(2)             --------->ZAT18        ---------->DOF2
 
gtagtcgaagacggagggaaagaaacagagaacttgtttgtttcgtcgaagaataagatgatgaagagagcccaacaatcggcaagagaaacaaagcaag  16983900
                                                                                    --------->At4g35610
                                                                                    <---------At4g35610
                                                                                    <---------ZAT2
             ---------->DOF2        <----------DOF2                           ----------->HVH21
          --------->ANAC58      <---------ZAT18                          <---------ARR11(3)
          --------->ANAC58   <---------MYB46(3)                         --------->ZAT2      <-------
 ---------->DOF2           <---------MYB52(1)                          ------>MYB46(1)     ---------
------->At4g35610        <---------MYB46(3)                            ------>MYB83 --------->ZAT2<-
 
aagctaaagatgctagcaaagcgaagagcggtttgttcgcttcttgttccttctcttcacttggtttagataccaagctctctgaccagctcaaaggttc  16984000
                                                                 --------->LBD16
                                                                <---------ANAC58
                                                                <---------ANAC55(1)
                                                    <----------DOF2
   <-----------GT1        ------>ZmHOX2a(1) <---------At4g35610 <---------ANAC58
--GLK1(2) <---------At4g35610               --------->At4g35610 <---------ANAC46 ---------->DOF2
>HSFB2a(1)------>NtERF2   <----------DOF2 <---------ZAT18       --------->ANAC55(2)  <------ZmHOX2a(1)
---------DOF2            --------->TOE2(3)--------->ZAT18    <-----------GT1  --------->ANAC46    <-
 
tcttttttacctctgccgatgttgacatcctttgtttatgcctagtgagcttaaactttgagtttttccgtgtcaatttacacagaaaggatgggttttg  16984100
                                                                                                   <
                                                                  ------>ZmHOX2a(1)                -
                                                            <----------DOF2                        -
                                <---------MYB52(1)          ------>ZmHOX2a(1)                     <-
                              ------>ZmHOX2a(1)         <---------ARR14(2)                  <-------
                          <---------ARR14(2)            ------->TEIL                        --------
                     --------->ANAC58                   --------->ARR14(2)                  <-------
   ------>ZmHOX2a(1) --------->ANAC46                  <---------CCA1(2)                 <---------ANAC46
--------At4g35610    --------->ANAC58              <---------ANAC46                <----------DOF2--
 
aagctcctactcttgtacaagctcaagcaattcctgttattctctctggtcgagatgtgtatccttttcctacaaatttctgtcttctttttgtgtgaac  16984200
                                                                               <---------HSFB2a(2)
                                                                               --------->HSFB2a(2)
---------ICU4                                                              <---------MYB52(1)
-------->ATHB12                             <---------AHL20(2)          ----------------->AGL1  ----
-------->YAB1                               --------->AHL20(2)          <-----------------AGL1  <---
--------YAB1                            --------->CCA1(2)              ------>MYB83          <------
--ZAT14                      <---------MYB52(1)                        -------->P ---------->DOF2
->ZAT18         <------MYB83<---------At4g35610                        ------>MYB46(1)       <------
--ZAT18         <------MYB46(1)        <---------ARR11(3)              --------->MYB52(1)    <------
------->ICU4   --------->MYB59         --------->ARR11(3)            <---------ALFIN1    <---------ZAT14
 
tatgattacatttgtagtttggtttgttttcagttaacttgagatatataaatgtatagacttgttaatgctccaaccggtactggaaagactatagcgt  16984300
    --------->ANAC58                           --------->KAN4(2)
    --------->ANAC58                      <-------TEIL
   ------>NtERF2                         <--------P
----->ARR14(2)                        <---------TOE1(3)
------ARR14(2)               --------->KAN4(2)------>ZmHOX2a(2)
---ANAC58             <---------AtLEC2<---------TOE2(3)                                --------->REM1(1)
---ANAC58     <-----------HVH21     =================HOX2a_HOX2a         <----------DOF2
---ANAC46    --------->WOX13(1)     ------>ZmHOX2a(1)       <----------DOF2      >>>>>>>ZML2
 
atttggcacccctcatccatcacttgcagggtcattctcctaaggttgatcgttctcatggaacttttggtatgtgcttttgttctagctacaatttagt  16984400
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AGI:  At2g40690.1   
Description:  GLY1 (SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1); glycerol-3-phosphate dehydrogenase (NAD+). similar to glycerol-3-phosphate dehydrogenase (NAD+) / GPDH [Arabidopsis thaliana] (TAIR:AT5G40610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41518.1); contains InterPro domain NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; (InterPro:IPR011128); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Dehydrogenase, multihelical; (InterPro:IPR013328); contains InterPro domain 6-phosphogluconate dehydrogenase, C-terminal-like; (InterPro:IPR008927); contains InterPro domain NAD-dep
Range:  from: 16981070    to: 16983536    Orientation: Forward
Links:  TAIR  MIPS 
 
AGI:  At2g40700.1   
Description:  DEAD/DEAH box helicase, putative (RH17). Identical to DEAD-box ATP-dependent RNA helicase 17 (RH17) [Arabidopsis Thaliana] (GB:Q7XJN0;GB:Q9ZS04); similar to DEAD/DEAH box helicase, putative [Arabidopsis thaliana] (TAIR:AT5G65900.1); similar to DEAD-box ATP-dependent RNA helicase 17 (GB:Q0DLB9); similar to unnamed protein product [Vitis vinifera] (GB:CAO65202.1); similar to putative ATP-dependent RNA helicase [Oryza sativa] (GB:AAK73153.1); contains InterPro domain RNA helicase, DEAD-box type, Q motif (InterPro:IPR014014); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-l
Range:  from: 16983861    to: 16986636    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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