Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->DOF5.7(2)                                               <---------HSFB2a(2)                                               --------->HSFB2a(2)                                            --------->ARR11(3)                                    ---                                        ------>ZmHOX2a(1)                                        <---                               <-------TEIL<---------CCA1(2)                                    <----       <---------ANAC46    --------------->AtSPL8     <----------DOF2                  --------->AHL20(2) -->MYB46(1)            ------>MYB83   --------->TOE1(3)              <---------ARR11(3)    <-------TEIL -->MYB83<-------GAMYB  ------>MYB46(1)--------->TOE2(3)              --------->ARR11(3)<---------ICU4 ------>RAV1(1)    <-----------GT1   <---------YAB1   --------->TOE1(3)       --------->HSFB2a(2)---- -->MYB46(3) <---------YAB1<---------------AtSPL8     --------->TOE2(3)       <---------HSFB2a(2)----   acaatggtttcggttataaataaaccaaatgggtacattatccttatatctagaaactttaaccaaaaacaagatgttatctagaaacaataaatacatc  16778800        <----------DOF2        <---------DAG2                                                <----------DOF2 ------>LBD16                                                         <---------DAG2    --------->ANAC58 ------HSFB2a(2)                             <---------AHL20(2)      <---------ANAC58   --------->ANAC58 -----LBD16                          <------NtERF2                   <---------ANAC58 ---------->DOF2 ----->ANAC46                       ------>NtERF2              ------->TEIL   <---------ICU4    ----- ----->HSFB2a(2)           <<<<<<<<<<<<<<<<<LFY  <-----------GT1 <----------DOF2  --------->AHL20(2)   cggaatgagactttttcttatgtaagtcgatacaatgggggcattgttttatttcccttcaaatgaactttgctttttgatcattttaaaaagccatatt  16778900                                <---------AHL20(2)                               --------->YAB1                             <---------AHL20(1)                             <---------AHL20(2)                             --------->AHL20(1)                             --------->AHL20(2)                            --------->YAB1                           <---------YAB1                         <---------CCA1(1)                        <---------ARR11(3)                                                         --                <------ZmHOX2a(1)     <----------DOF2     --------->AHL20(2)             <---------At4g35610      --------->WOX13(1)--------->ARR11(3)        <----------ID1                         --------->At4g35610 ------>GT1  --------->CCA1(2)<---------YAB1    ---------->DOF2             --------->AHL20(2)  -----   gaaaaaatcaatgagataggaagatagatattataatattctttttataaaaaagacaaaaaaaatacactaaaacaattgaataagagtcagcaaaaca  16779000           <----------DOF2          <---------DAG2                    <---------MYB59          ----------->GT1            <----      ------>ZmHOX2a(1)              <----------DOF2           ---------->DOF2                  ----- ----->GAMYB                        >>>>>>>>>>>>WRKY18     --------->REM1(2)                --------- ---->MYB52(1)              <---------TOE1(2)             --------->AtLEC2               ---------->DOF2   acgacgtccttaccttttttaaaagtttcccagttttgacttttgacctaaaccatttccatgtagaaagagagcaaaaaacaaaacaaaacaaagataa  16779100                                                                         <----------DOF2                                                                    ------>MYB83                                                                    ------>MYB46(1)                                                                 <---------HSFC1(2)                                                                ------->TEIL                                                                --------->SPL7                                                                --------->ARR14(2)                                                                <-----------ARR10                                                                <---------ARR14(2)                                                              --------->ZAT18                                                              <---------SPL7                                                             <---------ANAC58                                                             <---------ANAC58                                                            <---------------AtSPL3                                                            --------------->AtSPL8         --------->YAB1                            *TSS     <---------------AtSPL8         <---------ICU4                            ---------->DOF2<---------MYB59       <---------AHL20(2)                        --------->ANAC58--------->HSFC1(2)     --------->AHL20(2)                          --------->ANAC46--------->HSFB2a(1)                - -----ANAC55(2)                                  --------->ANAC58<---------HSFB2a(1)                < ------>GT1      ---------->DOF2        ---------->DOF2---------->DOF2 ------>ZmHOX2a(1)            < >YAB1--------->YAB1        >>>>>>>>>TBF1 --------->DAG2    --------------->AtSPL3              <----   gtaaaaaataaaaatgatataaagaaggaagaagaagaccgagaaaggtagacgaaagaaagagcgtaccttcctctttccttcttcgtaaaaaccaagt  16779200                                                    <---------ALFIN1                                <     ---------->DOF2                               --------->MYB46(3)                     <---------- -------------->AGL15                             -------->P                            <----------DOF2 ---------------AGL15                             ------>MYB46(1)                      --------->YAB1 ----------DOF2                 ------>ZmHOX2a(2) ------>MYB83  --------->LBD16        <---------ICU4 -----ARR11(3)     <----------DOF2------>ZmHOX2a(1)<---------MYB55(2)                 <---------ATHB12   tccttttaaaaggagcctctcctttctcatttgatccttcttcaaaaaccccaaccacttcttctccccaaaaacctccaaagtttcaatctttacttct  16779300                                                                                      <------MYB46(1)                                                                                      <------MYB83                                                                            --------->GLK1(2)                                                                       --------->YAB1 ----------->GT1                                                                  <---------AHL20(2) --------->MYB59                                      <---------GLK1(2)       ------>ZmHOX2a(1)      <---------AtMYB61                                  <---------ANAC58         ---------->ID1  <---------ARR14(2)  <-----                    <----------DOF2 <---------YAB1         <-----------GT1 <---------GLK1(2)--------- ----------DOF2     <---------------AGL15 <----------DOF2 <-----------GT1  --------->ARR14(2)  ------ -GT1         --------->ARR11(3)  <---------ANAC58    <---------MYB52(1)  <------ZmHOX2a(1) <--------   ctctttttctccaagttatcttcttttctaggtatgtcttgattctttctctctctgttttttcctatttcattcaggattctgggtttggttaaatctt  16779400                                                  --------->YAB1                                              -------->HAHB4                                              <---------AHL20(2)                                              <---------ICU4                                             --------->ICU4      <---------TOE1(3)                 ----------->GT1      <---------------AGL15      <---------TOE2(3)               <---------ANAC58      <---------ANAC58  <----------DOF2               --------->MYB52(1)<---------ICU4    <---------LBD16            ------ <---------ICU4              --------->ANAC46<---------YAB1 <XXXXXXXXXXXXXXXXXXXXMIR832-3P     ------ -----DOF2                  <---------TOE2(3)<---------ATHB51--------------->AGL15     ---------->DOF2 >ARR11(3)        <---------ANAC58    <---------ANAC46      <-----------------AGL3<---------ANAC46 --->TOE2(3)      <---------ANAC46    <---------ANAC58      <---------ANAC58    <---------ANAC46 -ARR11(3)        <---------ANAC58  <-----------HVH21   <----------DOF2  <---------WOX13(1)   <------   taatctttatggttttaatggcttgattttgacgaaacggtcgtgtaattattcattactttgcttaaattggggattgattttgtgtataaagaagaat  16779500                                                                              ---------->DOF2                                                                         --------------->AGL15                                                                     <----------DOF2                                            <-------GAMYB           <---------ANAC58     ----------->GT1                       <---------ANAC58      ---------->ID1           <----------DOF2 --->GLK1(2)                    <---------ARR11(3)             <-----------RAV1(1)     <-----------GT1 --->ARR11(3)                   --------->ARR11(3) <----------DOF2  <---------ANAC58 <-----------GT1 ---GLK1(2)                 ---------->DOF2<---------ANAC58  <----------DOF2------>ZmHOX2a(1)   cttgaaaatgaaaaattgaaactttgaatcgaaagaactcaatttgcgttgctctttctcattctttgttgctttctcctaaaagtttttcacttttgaa  16779600                                                                                                    <                                                                                                    <                                                                                                  ---                                                                                                  ---                                                                                            <--------                                                                                            <--------                 <---------ANAC58                                                           ---------                 <---------ANAC58                                                           ---------                 <---------ANAC46                                                           ---------                <---------DEAR3(1)                                                          <--------                <-----------------------TaNAC69(2)                                          ---------               --------->ZAT18                                                              <--------          --------->CCA1(2)                         --------->MYB52(1)             --------->At4g35610         --------->ARR11(3)     --------->TOE2(3)--------->TOE2(3)               --------->YAB1  ----         <---------ARR11(3)   -------->P         --------->TOE1(3)            <---------GLK1(1)  ----   <------ZmHOX2a(1)  ---------->DOF2    --------->At4g35610                  --------->GLK1(1)  ----   tcacaggaagagatatgtgcggtgcaaagagcaacctttgctcatctaaaaccctaacagaagtcgaattcatgaggcagaaatcagaagacggagcttc  16779700  Previous    Next  AGI:  At2g40140.1    Description:  CZF1/ZFAR1; transcription factor. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT3G55980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68018.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 16779151    to: 16781735    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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