Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------ARR11(3)                                                                     --------->ARR11(3)                                                                     --------->GLK1(2)                                                                    --------->RVE1(1)                                                                --------->AHL20(2)                                                            <---------YAB1                                                         --------->AHL20(2)                                        --------->TOE2(3)--------->AHL20(1) <----------DOF2                      ------->TEIL       <---------AHL20(2)     --------->ATHB12 -----DOF2             --------->ARR11(3)         <----------DOF2<---------AHL20(2) ---ANAC58            <<<<<<<<<RAP2.2<---------CCA1(2)   <---------AHL20(1)    <---------YAB1 ---ANAC58 ------>NtERF2--------->CCA1(2)     <---------ZAT18  <---------YAB1  <---------AHL20(2)   tcactttggaaggcgactcgttttagatatagttcatttgtatcttagtctacttttattttattattaaaaatctcgttttttattggccatttcaaat  15123800                                                                               <---------ANAC55(2)                                                                          --------->ATHB12                                                                          <---------ICU4                                                                         --------->ICU4                                                                         <---------YAB1                                                                       --------->O2                                                                     ----------->RAV1(1)                                                                  --------->ANAC58          ---------                                          <---------HSFB2a(1)     --------->ANAC58          <--------                                          --------->HSFB2a(1)     --------->ANAC46   ----------->GT1                                <<<<<<<<<<<<<<<<<LFY      --------->AHL20(2)   --------->ANAC55(2) --                        <---------At4g35610          XXXXXXXXXXXXXXXXXXXX>MIR844  --------->MYB52(1)   ttttgatttttgtataccatgtattgagcttatataacaatggaacttgccaaaatcaaattacttacaagccacatgattacataatggataaaaaaat  15123900                                                                 --------->ANAC58                                                                 --------->ANAC58                                                        <---------ICU4                       <---------ETT(2)                 --------->YAB1                ---------->DOF2                         <--------HAHB4               <---------MYB52(1)      --------->At4g35610       --------->ANAC46 --------->ANAC46--------->DAG2  --------->ICU4        <---------ATHB12                        ------ >AHL20(2)    --------->LBD16 --------->AHL20(2)      ------>MYB46(1)                      --------->YAB1 -AHL20(2)------------------>SPL14--------->YAB1      ------>MYB83<---------ATHB12    --------->AHL20(2) ------->ZAT6<---------ANAC55(2) <---------YAB1      --------->WOX13(1)            --------->TOE2(3)   aacacaaaaccaagtccgtaaagtatcgacaactaattataagctaagaaaaaaccaatcattttccaagcattgagacttccattcttaaaataagaat  15124000                       ----------->GT1                     ---------->DOF2                   --------->ANAC58            <---------ANAC58                                                       <-----------GT1  ------>NtERF2    --------->ANAC58                   ------------>CBF    <------------CBF      ----- --->GLK1(2)<---------ANAC58        ---------->DOF2  <-----------GT1   ------------>CBF----------->GT1   atgaggcccaatgggcttggcaagaaagttaaacaaaaaaaagaagaagacaattttacaattttgtcaagttttcaattgaaataaaccggttaaatcc  15124100                     --------->CCA1(2)                    <---------ARR14(2)                    <---------ARR11(3)                --------->YAB1               <---------ATHB12                                                          --------->YAB1           <------ZmHOX2a(2)                                                             <---------ICU4           ------------>CBF                                                             <---------YAB1           ====================================HOX2a_HOX2a                            <---------ICU4        --------->LBD16                               *TSS                            --------->YAB1      <---------LBD16--------->ARR14(1)             --------->YAB1                   <---------YAB1    <-----------GT1 --------->ARR11(3)              <-----------GT1                --------->YAB1  <---------AHL20(2)--------->ARR14(2)           --------->YAB1                    <---------ICU4 --------->AHL20(2) --------->ARR11(1)          ---------->DOF2                 --------->YAB1 ------->CBF --------->WOX13(1)         ------>ZmHOX2a(1)                    ------>ZmHOX2a(1)   ----   caatttaaaccggatcaatcaagatatggtaatccccttctccttctccaaaaatcacaactctgttccaagtcttatcctttcatcatcatcatcactt  15124200                               --------->ANAC55(2)                          <---------YAB1                        --------->YAB1                        <---------ICU4                    <-------TEIL                                     --------->ARR11(3)                 --------->At4g35610                                 <---------ARR11(3)                --------->ARR11(3)                         <----------ID1   <----------DOF2    <---------REM1(2)--------->REM1(1)   --------->At4g35610        --------->At4g35610  ------>ZmHOX2a(1) ---->P         <---------ARR11(3)       <---------At4g35610----------->RAV1(1)  ------>ZmHOX2a(1)   accttcttcacagagagagagcttcatcatcatatgtaatgtgagatgtctcttgaacaatgcaacaagaagctctctctttcctctcgtcctctctccc  15124300                                                     <---------ALFIN1                                                   --------->LBD16                                                   --------->ANAC58                                                   --------->ANAC46                                                   --------->ANAC58             <---------ICU4                                     <----------DOF2--------->LBD16             --------->YAB1                                   --------->At4g35610                ------>MYB46(1)               <-----------GT1  ------>NtERF2   <-----------GT1       ------>MYB83            <------              <-----------GT1  --------->DEAR3(1) <---------LBD16 >>>>>>>>>>MYB80           <--------    --------->REM1(1)  <----------DOF2 --------->REM1(1)<----------DOF2 <---------ALFIN1   <---------YAB1   ttcccttcaccacaattttccctctctttctcgcctccgcttcaacaattttcccgcactttccttcaaaccaaacacttcatcatcatcttcatcattc  15124400                                                   --------->MYB52(1)             <-----------GT1                      <---------ALFIN1           --------->CCA1(2)                      ------->GAMYB              --------->ANAC46          <-----------ARR10                       --------->AtMYB61      <<<<<<<<<GATA-4          --------->ARR14(2)    --------->AtMYB61<---------MYB52(2)      <<<<<<<<<GATA-1          <---------ARR14(2)    <---------ALFIN1 --------->MYB46(3)      <<<<<<<<<GATA-2          <---------ARR11(3)   --------->ANAC46 -------->P               <<<<<<<<<GATA-3      <---------LBD16         ----------->RAV1(1)<---------MYB55(2)  ------>ZmHOX2a(1)  <---------ARR14(2)         --------->ANAC46  ------->GAMYB        --------->TOE2(3)  --------->ARR14(2)         <---------ALFIN1 <---------MYB55(2) <---------ARR14(2) ---YAB1--------->LBD16    ------>ZmHOX2a(1)  --------->MYB46(3)<---------GLK1(2)            -------- -ICU4--------->LBD16     --------->ANAC46    <---------MYB111(2)--------->ARR14(2)        <---------At5g28300   ttcaaatccccagatataccctctctctcctccaccacaacaacaacaacaaccaccgaaaccctagaatcctcaatccacgagaaactcatttacctcg  15124500                                  <---------MYB52(1)                                 <-----------TGA1                    <---------MYB52(1)                                 <-----------HVH21                 --------->DEAR3(1)           -----                           <---------ATHB12         <---------ALFIN1<-------GAMYB               -----                      --------->TOE2(3)   --------->AtMYB61     --------->ANAC46                -----                 <---------MYB59------->GAMYB   ------>ZmHOX2a(1)------>NtERF2                <------    --------->ANAC58  --------->TOE1(3)   <---------ALFIN1      --------->DEAR3(1)        -----------    --------->ANAC58 --------->ZAT6    <---------ALFIN1--------->DEAR3(1)               <---------ANAC55(2)   <---------LBD16------>ZmHOX2a(1)   --------->MYB46(3)--------->ZAT14                 --------->ANAC55(2) ->TOE2(3)   <---------GLK1(1) --------->MYB46(3)--------->ANAC46--------->LBD16 <------NtERF2-------   attcactcggaatcgatttcctaaccctaatcaaccgtcatccacctctcctctccaccgctctctccgccgttgaatcagtcgtcgattacatgaccac  15124600                                    ============================================bZIP_DOF                                    --------->O2                                    <---------O2                                    --------->TGA1a                                 <------NtERF2                                 --------->ATERF1(1)                                <---------ATERF1(1)                                --------->ABI4(1)                                ------>NtERF2                               --------->RAP2.3(2)                               --------->RAP2.6(2)                               --------->RAP2.3(3)                               --------->ANAC46                               --------->DEAR3(1)                               <---------ATERF1(2)     <---------ATHB12         --------->ATERF1(1)                                --------->ANAC46 ---->ANAC46                  --------->ORA47(2)              --------->TGA1a    --------->ANAC58 ---->ANAC58                  --------->DEAR4(2)              ==================bZIP_DOF     -------- ---->ANAC58   <----------DOF2--------->ERF1         <---------ARR11(3)   XXXXXXXXXXXXXXXXXXXX>MIR403 ---ALFIN1     <---------DAG2 --------->RAP2.3(1)    <-----------ARR10  <-----------GT1     <-------- >HVH21<-----------GT1       <---------RAP2.3(1)  --------->HSFB2a(2)<----------DOF2      --------->ANAC46 -->AtMYB61    ===============================bZIP_DOF        --------->ANAC46   --------->ANAC58  <-   tccaccaataaacttcactttacaagactttcgccgcctcgtctcaatgtgtccagagcttctcacttcacctttaacctcacacacaatcccagtcatc  15124700  Previous    Next  AGI:  At2g35990.1    Description:  similar to carboxy-lyase [Arabidopsis thaliana] (TAIR:AT5G06300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67407.1); contains InterPro domain Conserved hypothetical protein CHP00730 (InterPro:IPR005269) Range:  from: 15121034    to: 15123855    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g36000.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT2G34620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15834.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 15124154    to: 15125706    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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