Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <------NtERF2                  <---------ANAC46                  <---------DEAR3(1)                  --------->ALFIN1                 <---------ABI4(1)                 --------->At4g35610                 <---------At4g35610                 <------NtERF2                 <---------LBD16                 --------->ATERF1(1)                ------>NtERF2                <---------ATERF1(1)                <---------ERF1                <---------RAP2.6(1)                <---------RAP2.3(1)                <---------ORA47(2)                <---------RRTF1(1)                <---------DEAR4(2)               <---------RRTF1(2)               <---------RRTF1(3)               --------->ALFIN1               <---------ANAC46               <---------RAP2.3(3)               <---------RAP2.3(2)               <---------DEAR3(1)              <------NtERF2              --------->ATERF1(1)              <---------ABI4(1)              --------->RAP2.3(1)              --------->At4g35610              --------->DREB2C(1)              --------->DEAR4(2)              <---------At4g35610             <---------ATERF1(1)             <---------ERF1             <---------RAP2.3(1)             <---------ORA47(2)             <---------DEAR4(2)             <---------RRTF1(1)             ------>NtERF2             <---------RAP2.6(1)            <---------ANAC46            --------->ALFIN1            <---------RAP2.3(2)            <---------RRTF1(3)            --------->DEAR3(1)            <---------DEAR3(1)            <---------ATERF1(2)            --------->ATERF1(2)            <---------RRTF1(2)            <---------RAP2.3(3)            <---------RAP2.6(2)           --------->RAP2.3(1)           <---------At4g35610           --------->DREB2C(1)           --------->DEAR4(2)           --------->ATERF1(1)           <------NtERF2           --------->At4g35610           <---------ABI4(1)          <---------ATERF1(1)          <---------DEAR4(2)          <---------RAP2.6(1)          ------>NtERF2<------ZmHOX2a(1)          <---------RRTF1(1)          <---------ERF1                                                                      <------          <---------ORA47(2)                                                                ---------          <---------RAP2.3(1)                                                              <------NtERF2         <---------RAP2.6(2)                                                               --------->ANAC58         <---------ATERF1(2)                                                               --------->ANAC58         <---------DEAR3(1)                                                               ------>NtERF2         <---------RRTF1(3)              --------->ANAC46                                 <---------LBD16         --------->ATERF1(2)            ------>NtERF2                                    <---------ANAC46         <---------DREB2C(2)    --------->At4g35610                                     --------->ATERF1(1)         <---------RAP2.3(3)    --------->ZAT2                                         <---------RAP2.3(1)         <---------RAP2.3(2)    <---------ZAT2                              <----------ID1--------->LBD16        <---------ORA47(1)      <---------At4g35610                      --------->ALFIN1--------->DEAR3(1)        <---------ABI4(1)       --------->GLK1(1)                     <------NtERF2    ------>NtERF2 --->ZmHOX2a(1)--------->DEAR3(1)       --------->LBD16              --------->LBD16   --------->LBD16 ---->At4g35610<---------ATERF1(2)    <---------LBD16          --------->ZAT2         <---------RAP2.3(2) -----At4g35610<---------RAP2.6(2)   ------>ZmHOX2a(1)        --------->ARR11(3)     <---------LBD16 ------>RAV1(2)--------->ATERF1(2)  <---------ALFIN1          <---------ARR11(3)   <---------ARR14(2) ---HVH21<---------RRTF1(2)     <---------GLK1(1)  ---------->DOF2 <---------LBD16 --------->ARR14(2)   ctgccaattgggcggcggcggcggaggaagacggagctcctccgcgctgtgagcaaagtggcaagagctcgcggagtagggacaagttccggcgcggaat  14909100                                                      ------>ZmHOX2a(2)                                                      <---------ANAC58                                                      <---------ANAC58                                                =============HOX2a_HOX2a                                             ================HOX2a_HOX2a                                          <------ZmHOX2a(1)                                          ===================HOX2a_HOX2a                                          ==================HOX2a_HOX2a                                    <---------LBD16  <------ZmHOX2a(2)                                    <---------HSFB2a(2)                                   =================HOX2a_HOX2a                                   ------>ZmHOX2a(2)--------->ARR14(3)                                   ==============HOX2a_HOX2a                                   ====================HOX2a_HOX2a                                  ==================HOX2a_HOX2a                                  ===============HOX2a_HOX2a                                  =====================HOX2a_HOX2a                                  <------ZmHOX2a(2) <---------ARR11(3)                                 --------->ARR14(2) --------->ARR14(2)                                 <---------ARR14(2) --------->ARR11(3)          ------>NtERF2                               --------->LBD16  <------ZmHOX2a(1)              --------->ANAC46          <-------TEIL        <---------HSFB2a(2)   <---------ARR14(3)      ---------->CDC5       --------->HSFC1(2)     --------->HSFB2a(2)   <---------ARR14(2)    --------->GLK1(2)    ---------->DOF2          <---------LBD16 ===============HOX2a_HOX2a   <-----------ARR10 ---ARR14(2)              --------->GLK1(1)  <------ZmHOX2a(1)     <---------LBD16 >LBD16<---------HSFC1(2) <---------GLK1(1)--------->ALFIN1       <---------ANAC46                  -   ttgaagcaaagcttcgtcttgaagaacgatttcccgatctcggaggaggaggaagatcgtgtcttcttgctcggagactctgcgccatcagagtttatgg  14909200                                              --------->LBD16                                             --------->LBD16                                            <---------LBD16                                            <------NtERF2                                           <---------RAP2.3(1)                                           ------>NtERF2                                          --------->ETT(2)                                          <---------ETT(2)                       <---------DEAR3(1)                                        <-----------HVH21                        <---------MYB46(3)                                       <-----------RAV1(1)                      <---------ANAC46                                    --------->ARR14(2)                        <---------ANAC58    ---                                 --------->ANAC46                             <---------MYB46(3)  <--               <---------ICU4    --------->ANAC58                             <---------ANAC46  <----               --------->YAB1    --------->ANAC55(1)                          <---------ANAC58<------              --------->ICU4     --------->ANAC58                            --------->ALFIN1 -------              <---------ATHB12 --------->MYB52(1)                           <-----------HVH21<-------            --------->YAB1    ----------->HVH21<------NtERF2            --------->ATERF1(1)  --------     --------->ANAC58        <-----------RAV1(2)<---------GLK1(2)       <------NtERF2        <-------     --------->ANAC58        ======================RAV                --------->ALFIN1       --------  --------->ARR14(2)       --------->PCF5 <---------DEAR3(1)          <---------DEAR3(1)     --------  <---------ARR14(2)------>ZmHOX2a(1) <------------AtMYB77           <---------LBD16         <------- ---------->HVH21  --------->TOE2(3)<---------ARR14(2)            <-----------RAV1(2)        <-------   cccagacacggctgtaatcatcctcagtggcccagacggaactgtcgccggaatttggaaaacaattctcaggcggagggtcgtgggtgattctcacgtg  14909300                                      --------->WRKY12                                      --------->WRKY38(1)                                      --------->ETT(2)                                      <---------ETT(2) ------>At4g35610                     --------->DEAR3(1) -------At4g35610                  <---------O2                           --------->ANAC58 -----ZAT14              --------->WRKY38(1)                     --------->LBD16 -MYC3                 <---------At4g35610                      <-----------RAV1(2) >MYC3                 --------->At4g35610  --------->ANAC58    <---------LBD16 --O2                 --------->DEAR3(1)    --------->ANAC46   --------->TOE1(2) ->O2      --------->RAP2.6(2)     --------->TGA1a       --------->TOE2(3)--------->ANAC46 --TGA1a   <---------ANAC46        --------->O2          --------->TOE1(3)--------->ANAC58 ->TGA1a   --------->ANAC55(2)     <---------TGA1a--------->TOE1(3)     ---------->DOF2 ->ANAC55(2) <---------MYB52(1)    ================================================bZIP_DOF --ANAC55(2)<---------RAP2.6(3)<-----------HVH21  --------->TOE2(3)<------ZmHOX2a(1)     ---------->DOF2 --ANAC46 <-----------------------TaNAC69(2)--------->ANAC58 >>>>>>>>>MYB98       <------ZmHOX2a(1)   aactgcatcactgccgtaatctcgccgatgactcatcacgtcgaccaagaaaccctaaaccctaacccaggagtaaaagcaagaggaagtggaaagagat  14909400                                                     --------->YAB1                                              --------->ANAC58                         <------ZmHOX2a(2)                                         <---------ZAT6                      <-----------TBP                                   --------->DAG2  --------->ANAC58          --------->AHL20(2)                               ----------->GT1--------->ANAC58  --------------->AGL15<------ZmHOX2a(1)                             ---------->DOF2---------->DOF2     *TSS         <---------AHL20(2)<-----             --------->At4g35610  ---------->DOF2  --------->ANAC58        <-----------TBP   --------     ---------->DOF2  <------ZmHOX2a(1)  ----------->GT1  --------------->AtSPL3   <---------TOE2(3)   agagagagaaagagtagatgaagaggaagtggaaagtaaagtagagtaaagccactcaaaatcgtactagtagtagcatttatataaggatcaaaatgtg  14909500                   <-----------HVH21               <---------ICU4               <--------ATHB1               --------->YAB1              --------->ICU4                                                                        <              <---------ATHB12                               <---------ICU4                   <------NtERF2       <---------AHL20(2)             ---------->DOF2       <---------YAB1               --------->MYB46(2)      --------->AHL20(2)          ---------->DOF2           --------->ICU4               --------->MYB59     ----------->TBP         <---------AHL20(2)          <---------YAB1              <---------MYB46(3) ----YAB1     <---------ATHB51   --------->AHL20(2)  <---------TOE2(3) ----------->GT1 <---------MYB52(1) --->GT1  ------------>CBF  --------->AHL20(2)  <-----------GT1 <---------ICU4  ---------->DOF2    <-   attagctataaaatcaataatggtcacagattaaataaaagaaagaagtttaactaatgttgataattaagacgagtaaaacaaaagttgttaggcagag  14909600               --------->ARR11(3)                          --------->ZAT14               <---------ARR11(3)                          <---------ZAT14 --------->GLK1(1)                                       --------->ANAC46 <---------GLK1(1)                                     <-----------GT1                        <------ ---------ARR14(2)                             <---------ANAC46                               ------- -----ZmHOX2a(1)                               ----------->GT1                  <-----------GT1   aggatttctatttttaagagcttcacttgctctactagtttagcaagttgtgtaaattcacttcacactctctgaatcgattctaccatatgaaaccgcg  14909700                    ------->GAMYB                  ------>MYB83                  -------->P                                   <----------DOF2 ---ZAT18         ------>MYB46(1)                        <---------ALFIN1 -->ZAT18    --------->GLK1(2)  <-----------GT1      <------ZmHOX2a(2)    ---------->DOF2     <------   cttgtacatttcaagaatccaacccaaacaagttttacaatgctgactaatctcgatcaccacttctttcaattctcaaagaaaactcaattgtctcttt  14909800                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                 <---------ANAC46                               -----                                                 <---------ANAC58                              <-----                                                 ----------->GT1                              -------                                                 <---------ANAC55(2)                          <------                                      --------->YAB1                             --------->AHL20(2)                                      <---------ICU4                     <---------LBD16  <---------LBD16                                     <---------ATHB12           <---------MYB52(2)      <-----------GT1                                    <-----------HVH21         ------->TEIL  ----------->GT1 --------- ----DOF2                    --------->ARR14(2)  <---------ANAC58 --------->MYB52(1) --------->YAB1 -   gaattccacattgctatcacttgcacaactcgatactccatcatggcgatttcgtaaatagatgaaactaacttacacgggtataaattataaccggaga  14909900                                                                                         --------->ICU4 ------>NtERF2                                                                           <---------YAB1 --->NtERF2                                                                           --------->DEAR3(1) ----->ANAC58                                                                        <------NtERF2  - ----->ANAC46               --------->MYB52(1)                                      ------>NtERF2   < ----->ANAC58           --------->ANAC58                                        --------->ANAC58<---- ---->ATERF1(1)         --------->ANAC46                                      ---------->DOF2  <----- ----ATERF1(1) ----------->GT1                                              --------->ZAT2   -------- -->ARR14(2) <---------ANAC46                                               <---------ZAT2--------->YAB1 ---ARR14(2) <---------ANAC58                                              --------->ANAC46 <-------- >LBD16      <---------ANAC58         --------->GLK1(2)               <-----------HVH21  <---------ATHB12 -------->DEAR3(1)      --------->ANAC58    <---------GLK1(2)    <---------YAB1 --------->ANAC58-----   cgccaactcttacttacttgtaaaacaagctactggagagaagcttgattcttgaaacttatccctcataaatgtcccagcaaagccaccgatgattata  14910000  Previous    Next  AGI:  At2g35430.1    Description:  zinc finger (CCCH-type) family protein. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT1G32360.1); similar to hypothetical protein OsI_026903 [Oryza sativa (indica cultivar-group)] (GB:EAZ05671.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 14907951    to: 14909464    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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