Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                               ------                                                                                       <-------TEIL                                                                                      --------->ARR14(1)                                                                                      --------->CCA1(2)                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                     --------->ARR11(1)                                                                                    <---------HSFC1(2)      ------>ZmHOX2a(1)                                                             --------->HSFC1(2) ----->ZmHOX2a(1)                                                      --------->TOE2(3)      <------ --------ANAC58                                                   <-------TEIL      --------->HSFB2a(1) --------ANAC58                                               <---------YAB1        <---------HSFB2a(1) -----ZAT18        --------->AHL20(2)                         <---------TOE2(3)    ----------->ARR10   tccttgtcctgaagaaaccaaaaaaatggaaaatggtatgactagaaaacatcaagagaacattaagattcaatctcaaaaacagaagattcgagtaagg  14723300                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                              <---------At5g28300                          --------->CCA1(2)                --------->ARR14(3)                                        --------->ARR11(3)                <---------ARR11(3)                                        <---------ARR11(3)    ----- <---------YAB1 <---------ARR14(3)                                      ----------->ARR10     ------- --ZmHOX2a(1)   --------->GLK1(2)                         <---------ANAC55(2)          ----------->GT1 --->ICU4<----------ID1      --------->YAB1               --------->ANAC55(2)        --------->ICU4 ---TOE2(3)     --------->ARR11(3)           <-----------HVH21      <---------ZAT6   <---------ATHB12   attgtcatttaaggccaaaatcttgatgcaattacagtctcaatatttgtcacatcaagtatgtaatctagagtaagatatgtagcaataagtaatacac  14723400                                          ---------->DOF2                   --------->ZAT6                                        ------>ZmHOX2a(1)              --------->TOE2(3)                                       --------->TOE1(3)             <---------YAB1   --------->YAB1                    <---------YAB1                <---------ICU4  <---------YAB1                   --------->YAB1                  --------->YAB1 ---->ANAC46                     ------->TEIL                     <---------ATHB12 -->ANAC46             ---------->DOF2 --------->TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   caaaatgataaccaaaactaggcgattaagcgatgaatcatccttaaaacgaggcgattaatcgacgaatcattcttaaaactactcgaggcgattaatc  14723500                                                 --------->TOE1(2)             --------->ZAT6                    --------->ZAT6                   =====================        --------->TOE2(3)                 --------->TOE2(3)                     ------>ZmHOX2a(1)      <---------YAB1                  --------->YAB1                           --------->TOE1(3)    <---------ICU4                    <---------ICU4                         <---------YAB1    --------->YAB1                   <---------ATHB12          ---------->DOF2 --------->TOE2(3)   <---------ATHB12                 ------->TEIL --------->TOE2(2)       ------->TEIL  ------->TEIL            <---------YAB1<---------YAB1     ----------->GT1 --------->YAB1          <-   tatgaatcattcttaaaactaggcgattaatatcgatgaatcattcttaaaactacgagaggcgataaatcgatgaatcatccttagtactaggcaaatc  14723600                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                           --------->ANAC58                                                           --------->ANAC58                                                       --------->ANAC58             --------->YAB1                            --------->ANAC58             <---------ICU4                          ---------->DOF2      <-----------GT1            <---------ATHB12                       ------>ZmHOX2a(1)  <-----------ARR10           ------->TEIL                           --------->TOE1(3)   --------->GLK1(2)   <---------At4g35610 =====HOX2a_HOX2a                                 --------->TOE2(3)  <---------GLK1(2)    --------->At4g35610 -----ZmHOX2a(2)                                <---------YAB1--------->CCA1(2) <----------DOF2    --   gatcaattcgatgaatcattctttcgaactatgcgagaaatggatgaattatccttaaagcaagatatatagaatctaacctctttgttctgagcagcac  14723700                                  --------->ANAC58                                  --------->ANAC46                                  --------->ANAC58                                <---------ALFIN1                        <---------ATHB12                       ------>MYB83                      --------->WOX13(1)                    --------->YAB1                       ----                    --------->MYB46(3)         ---------->DOF2--------->MYB46(3)                 ----             <------------CBF  --------->ZAT14 --------->MYB52(1)                <---------MYB46(3)       --------->ATHB12------>MYB46(1) --------->ANAC46  --------->YAB1     ---------->DOF2     ----- -------->DOF2      ------------>CBF--------->ZAT14<------ZmHOX2a(1)   <----------ID1--------->MYB52(2)   tgaaaggctccattggattggaaccaatcactctccactccacaaaacccaaaggactctaataacaactgagaagacaaaagttgttagtagccctaac  14723800                                                                                           --------->YAB1                                                                                          <---------ATHB12                                                                                         ------>MYB46(1)                                                                                         ------>MYB83                                                                                        --------->WOX13(1)                                                                                      ------------>CBF                                                                                  --------->YAB1                                                                               <---------GLK1(1)                                                         ---------->DOF2      <---------ARR14(2)                                                  --------->MYB52(1)          --------->ARR14(2)                                                 ----------->HVH21            <---------ARR11(3)   --------->AHL20(2)                           --------->AtMYB61             --------->ARR11(3)   <---------AHL20(2)                          --------->ANAC46              <------ZmHOX2a(1) ----->TOE2(3)                                 --------->bZIP60(2)         <---------TOE2(3) ----->TOE1(3)                               <---------ALFIN1   --------->CCA1(2)<---------YAB1  ---- ---->ZAT6    <------ZmHOX2a(2)           --------->ANAC46    --------->CCA1(2)--------->GLK1(1) ----   cctaataaaacaggggatcaacaaaatacccagacttaagaaatactccacctcacagataaagagataagaaaactgaggatatcataccaatcacaaa  14723900                                                                                          -------->HAHB4                                                                                          --------->ATHB12                                                                             ----------->GT1                                                                          <---------ZAT2 --------->ICU4                       <------------CBF  --------->ATHB12                 --------->ZAT2 <---------ATHB12                     <---------------AGL15                            ----------------->AGL1                     ===================================================================MADS_MADS   -                   --------->TOE2(3)    <---------YAB1                <-----------------AG<---------ICU4          <-----------GT1<-----------RAV1(1)                   ---------->DOF2       <---------AHL20(2) ----->YAB1  <---------DAG2       --------->AHL20(2)     --------->YAB1  --------->MYB52(1) <-------- ----->ANAC46--------->TOE2(3)<---------ANAC46   ----------->GT1--------->DAG2       --------->AHL20(2)   cacaactcaaaatcaccttatccctaattgtggcataaaaatttgattagggagttaaatgaaaataaagtagcccaactgggaaatttaaatgattagt  14724000                                                                                               <-----                                                    --------->YAB1                            ------>ZmHOX2a(2)                         <---------ATHB12           --------->AHL20(2)                       <------ZmHOX2a(2)           --------->ANAC46               --------->YAB1                            --------->TOE2(3) -------->YAB1   ---------->DOF2         <---------YAB1           ----------->GT1   --------->TOE1(3) -YAB1 ----------->RAV1(1)         --------->AHL20(2)        --------->AHL20(2)  <-----------GT1 <---   aatgagaaacaacacagaacaaagccaatcgactaaataaactatcatcaacaattaaaaaaaaaaaatggaatataagtattttacctcaaacgatcgg  14724100                                                           <---------AHL20(2)                                                       --------->ATHB12                                                      <---------YAB1                                                      --------->ICU4                                <                                              <---------AHL20(2)                                    -                                              <---------AHL20(1)                              -------                                              --------->AHL20(2)                              <------                             ---------->DOF2 --------->AHL20(2)                          <---------ARR11(3)            ----------->GT1--------->LBD16   <---------AHL20(2)                          <---------AHL20(1) ----MYB46(3)            <---------LBD16    <---------YAB1--------->AHL20(2)             --------->AHL20(1) ------MYB52(1)         <---------ANAC46<---------GLK1(2) <---------AHL20(2)             --------->AHL20(2)   ttgagtttcagagatggaaaaaacttgtgcggaaagtgtctagattattaaatttcatgatttatttgacaactactaattctgaaaactatatattaaa  14724200  Previous    Next  AGI:  At2g34880.1    Description:  MEE27 (maternal effect embryo arrest 27); transcription factor. similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT1G30810.1); similar to transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G20400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46776.1); contains InterPro domain FY-rich, C-terminal; (InterPro:IPR003889); contains InterPro domain FY-rich, N-terminal; (InterPro:IPR003888); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains Inte Range:  from: 14718959    to: 14723713    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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