Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <------ZmHOX2a(2)                                                                   ===================HOX2a_HOX2a                      <---------TOE2(3)               --------->CCA1(1)                  <---------ANAC55(2)                    <---------AHL20(2)                --------->RVE1(1)                  <---------ANAC58                   --------->AHL20(1)     ----------->GT1         <---------ARR11(3)     --------->ANAC55(2)                   <---------AHL20(2)   ---------->DOF2           --------->ARR11(3)     <---------ANAC58                   --------->AHL20(2) <------ZmHOX2a(2)       ---------->DOF2            <---------ANAC55(1) --------GT1  --------->AHL20(2)     <---------ARR11(3)<---------ARR11(3)          --------->AHL20(2) --->AHL20(2) <---------AHL20(2)     --------->ARR11(3)--------->ARR11(3)      ------>ZmHOX2a(1) ->TOE2(3)   --------->YAB1        <---------YAB1 --------->AHL20(2) --------->WOX13(1) <-------TEIL>   aacaattttgaactattaaaatttaatgtagacgattaagatcaaagttaaaaaaaatatctcaaaaagatcagtcatttcctctataaatacgtgattt  14116600                                                         <---------ZAT14                                                     <---------ICU4                                                  <---------ICU4                                                 --------->AHL20(2)                                                 <---------ATHB12                                     ----------->GT1--------->ICU4                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                --------->ANAC58 --------->ICU4                            --------->ANAC58     <---------ATHB51  <---------AHL20(1)              --------->TOE2(3) --------->ANAC58 <---------AHL20(2)<---------ARR11(3)               -             <----------ID1 --------->ANAC46   ------>MYB83        --------->AHL20(1)             <--             ----------->GT1--------->ANAC58   ------>MYB46(1)     --------->ARR11(3)        <------ZmHOX2a(2) >>>>>>>>>>>>>>>>LFYxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) --------->ZAT14  ---------->ID1    ---------   tagtccattgtcaaaacgtcaaaaacttgtacgcaaggatggaaaaaccaaataattagtacagaagaaaatatttgtctcttaagtcttaatagatcca  14116700                                                                 --------->GLK1(1)                                                                 <---------GLK1(1)                                                              <---------YAB1                                                            --------->YAB1                                                           <---------YAB1                                                           --------->ICU4                                                         -------->HAHB4                                                         <---------ICU4                                                         --------->YAB1                                                        <---------ATHB51                                                        --------->ICU4             --------->AtLEC2              ----------->GT1                         --------->YAB1            <-------TEIL             <---------TOE2(3)                        <---------ICU4     ------>ZmHOX2a(2) -------->MYB52(1)   <-----------GT1 <---------YAB1  <---------AHL20(2) <------ZmHOX2a(2) -------MYB52(2)<---------RVE1(1)  --------->YAB1    --------->AHL20(2)--------->ARR14(2)         --- >AGP1   --------->CCA1(2)  <----------DOF2         <---------YAB1     <---------ARR14(2)   ------->TEIL   actagccgaagaaatgaggtattttacaaactttcatttataattctattagttattaattatgatgaattccgatcttaagttcatacaaatgtatatg  14116800               --------->ARR11(3)               <---------ARR11(3)              --------->CCA1(1)      --------->TOE2(3)     ----------->GT1                   ----------->GT1       <---------ARR11(3)    <---------TOE2(3)     --------->YAB1      --------->AHL20(2)                            ---------    <---------TOE1(3)  --------->WOX13(1)    --------->AHL20(2)                            ---------- <---------AHL20(2)   <---------AHL20(2)     --------->YAB1  --------->ARR11(3)          ---------->DOF2 --------->AHL20(2)   --------->AHL20(2)  --------->YAB1 ---------->DOF2           <----------DOF2 ---->TEIL    --------->RVE1(1)     --------->GLK1(2)   <---------AHL20(2)      <-----------GT1   tattttaatgttaaaaatatctaattaatcacaaaactaatctgtaataaaaatagatttaaagatttgtcaactacaaaattttctttttgaaagttaa  14116900                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                             --------->ATHB51                                                        --------->ANAC58                                                     --------->TOE1(2)                                                     <---------SPL7                                                     --------->TOE2(2)                                                    --------->ANAC55(2)                                                    --------->ANAC46                            -----                                                   <---------------AtSPL3                       <----                            <-----------GT1        --------------->AtSPL3                      <-----                          <----------DOF2        --------->ARR14(2)                          --------                       <---------ARR11(3)     <---------ANAC46   <-----------GT1 ------------>CBF  --    ---------->DOF2    --------->ARR11(3)<---------ICU4 --------->ANAC58         XXXXXXXXXXXXXXXXXXXX -->GT1             <-----------GT1     --------->ICU4 --------->SPL7    <-----------GT1<---------YAB1 ->GT1        <----------DOF2      --------->YAB1<---------ARR14(2)     --------->AHL20(2)   <-------   aattttcaaagtcattcttttgtaacatcttttccattcgtaatatttgcctatacgtacgaattatttacaaattaactaaatccaattttgaatatac  14117000                                                                                       ----------->HVH21                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                     <---------ANAC55(2)                                                                                     --------->ANAC55(2)                                                                                  --------->ARR14(2)                             <---------MYB52(1)                                ------>ZmHOX2a(2)                            <-------GAMYB                                     <------ZmHOX2a(2)                            <---------At4g35610                              <---------ARR14(2)         --------------->AGL15--------->WRKY38(1)                            --------->ARR14(2)      <-----------GT1      <---------ANAC46                                --------->LBD16 ---->ANAC55(2)            <---------ANAC58                                <---------ATERF1(1) -----ANAC55(2)            <---------ANAC58                                <------NtERF2 --TEIL------------>CBF --------->ARR14(2)                                --------->RAP2.6(2) ->ARR14(2)             <---------ARR14(2)                           ---------->DOF2<-------TEIL ----->TEIL       <------ZmHOX2a(1)      *TSS                     <---------DAG2  <---------GLK1(2) >MIR826 <---------------AGL15----------->HVH21          --------->AtLEC2<---------LBD16 --ARR14(2)  --------->CCA1(2)--------->WRKY12 --------->TOE2(3)  <----------DOF2 <---------ARR14(2)<   gtatatttttccaatatacaggaacagttccgttgacaagttgagacaacctcgaagtaatgcaaacactttaaggccggatccgattcgtgacccgaat  14117100                <-----------RAV1(2)             ------>NtERF2      --------->ARR14(2)      <---------GLK1(2)                                                                       -------      <---------ARR14(2)                                                                      <------    --------->LBD16                                               <---------YAB1          <---------LBD16   --------->HSFB2a(2)                                          <-----------GT1  <---------ALFIN1  <-----------------AGL1                          <------ZmHOX2a(1)       ------>ZmHOX2a(1)   <------  ----------------->AGL1                --------->ATHB12 <---------ZAT14  ----------->HVH21 ---------  <---------LBD16   --------->ALFIN1   <-------TEIL  <---------------AtSPL8   --------->TOE2(3) ---------ARR14(2)<---------ZAT2    <---------DEAR3(2)   <-------TEIL   ----------->RAV1(2)<---------ANAC46   agtttccggattcggagcccaggtgttgtttctgtcttcggttcattgggaaggatgagtacattgttaccatttcctgacctcaacctcatgccggatt  14117200                               <---------ALFIN1                          <---------RAP2.3(1)                          <---------ATERF1(1)                          ------>NtERF2                          <---------DEAR4(2)                         <---------DEAR3(1)                         --------->DEAR3(1)                     --------->MYB46(3)                   <---------ALFIN1                   --------->AtMYB61                  --------->MYB46(3)                <---------ARR14(2)                --------->ARR14(2) <---------ZAT14               <------NtERF2  <------NtERF2              --------->LBD16----------->RAV1(1)           --------->ABI4(1)----------->HVH21          --------->DEAR3(1)<---------ETT(2)          <---------ALFIN1--------->LBD16          --------->DREB2C(2)------>NtERF2          ------->GAMYB<---------ZAT2     <---------LBD16         --------->DEAR3(2) --------->DEAR3(1)         --------->MYB46(3)--------->RAP2.3(1)        <---------ATERF1(1)--------->ATERF1(1)       --------->AtMYB61 <---------ATERF1(2)    ----------->GT1      --------->MYB46(3) --------->ATERF1(2)  ---------->DOF2                          --------->ANAC46     ------>ZmHOX2a(1)--------->DEAR3(1)  --------->At4g35610                <------ZmHOX2a(1) -->ARR14(2) --------->RAP2.6(2)   --------->ZAT14     ----------->GT1     <---------TOE2(3) ---ARR14(2)<---------LBD16<------NtERF2 --------->MYB52(1)          <---------------AGL15 ---GLK1(2)------>NtERF2--------->ATERF1(1) --------->LBD16         ----------------->AGL3   -------- >LBD16<---------ALFIN1--------->ZAT2   <---------WRKY38(1)         ----------------->AGL1  ---------   ctcaatcctccaccgccggaaccacagccggcgacactgtagtcaccggaaagttagaagtgaaatcggaaccaattgaggaatggcaaactccaccatc  14117300                                                 <---------ARR14(2)                       <---------WRKY12                                                 ------->TEIL                --------->ANAC58                                                 <---------ARR11(1)        ---------->DOF2<---------WRKY38(1)                                                 --------->ARR14(2)   <------NtERF2      --------->WRKY18(1)         <------ZmHOX2a(2)           ------>NtERF2                  --------->ANAC58    <-----------HVH21         <---------ATHB12   ------>ZmHOX2a(2)   <---------CCA1(2)<---------At4g35610--------->ZAT14   --------->TOE2(2)       <------ZmHOX2a(2)    <---------ARR14(1)  --------->ANAC58<---------ZAT14 ->AtMYB61   <---------ATHB12       --------->DEAR3(1)    --------->ARR11(3) --------->ANAC46 >MYB46(3) --------->WOX13(1)    --------->DEAR3(1)       <---------ARR11(3) --------->ANAC58  <-----   gtctacctccgatcaatcagccaataccgatctcatcgccgagtttattcgtatctcagagctcttccgctcggcattcaagccactgcaggtcaaagga  14117400                    --------->ARR14(2)                    <---------ARR14(2)                                                --------->LBD16                 --------->ANAC55(2)                                               ------>NtERF2                 --------->ANAC46                                                 --------->DEAR3(1)                <---------LBD16                                                 <---------ATERF1(1)              --------->ARR14(2)  <------NtERF2       ---------->DOF2          ------->GAMYB              <---------ARR14(2) ------>NtERF2    --------->LBD16           <-----------GT1   <------           <---------ANAC46   <---------At4g35610<---------ANAC46        <---------WOX13(1)   <------       --------->ATERF1(1)--------->GLK1(2)    ------->TEIL            --------->ATHB12 <------ZmHOX2a(1)      <---------ATERF1(1)<---------ARR14(2)  <---------SPL7     --------->LBD16--------->DEAR3(1)     <---------GLK1(2)   <---------GLK1(2)  <----------DOF2   <---------LBD16 --------->DEAR3(2)<---- -ZmHOX2a(1)--------->LBD16  <-----------RAV1(1)<---------LBD16<---------LBD16--------->MYB46(3)-----   ttagacggagtctccgtatacggattggattctggtgccatcgttgctgtaccggagaaagaaaaccgggaattgattgaaccgcctccaggatttaagg  14117500  Previous    Next  AGI:  At2g33290.1    Description:  SUVH2 (SU(VAR)3-9 HOMOLOG 2). Identical to Histone-lysine N-methyltransferase, H3 lysine-9, H3 lysine-27, H4 lysine-20 and cytosine specific SUVH2 (SUVH2) [Arabidopsis Thaliana] (GB:O22781); similar to SUVH9 (SU(VAR)3-9 HOMOLOG 9), histone-lysine N-methyltransferase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G13460.1); similar to SUVH9 (SU(VAR)3-9 HOMOLOG 9), histone-lysine N-methyltransferase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G13460.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71495.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81444.1); contains InterPro domain Pre-SET zinc-binding reg Range:  from: 14117041    to: 14119464    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version