Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->AHL20(2)                   <---------ANAC58                                            -------->HAHB4                   <---------ANAC58                                            --------->YAB1              <---------ICU4                                                  <---------YAB1        ----------->GT1                                <-----------GT1      <--------HAHB4 --------------->AGL15                             --------->AHL20(1)       <---------ICU4          - <---------------AGL15                             <---------AHL20(1)      <---------YAB1           < ---------------->AGL2                           <---------ARR11(3)        --------->ICU4         --- ---------------->AGL3                           <---------AHL20(1)      --------->YAB1           <-- -----------------AGL2         --------->AHL20(2)--------->AHL20(1)--------->DAG2             ------- --AHL20(2)  --------->ICU4 <---------ICU4 --------->TOE2(3)      ---------->DOF2       <---------TOE2(3)   atactaaaaatagtaaatattgcttactcacaattacatagaaaaccacaatatatattaccaggtctaaaagtgtcataattatagattaagaaattat  13826100           <---------AHL20(2)           <---------YAB1          --------->AHL20(1)          <---------AHL20(1)          <---------AHL20(2)     --------->At5g28300 -------->ZAT18           --------->ARR11(3)                           <---------DAG2 ---------ZAT14           <---------ARR11(3)                           <----------DOF2 ------>At4g35610      <-----------GT1                              <---------TOE2(3) -------At4g35610     --------->YAB1                                <---------TOE1(3) -->YAB1  --------->AHL20(2)    --------->ZAT6             --------->AtLEC2                      <---   agctcactgtaatataattctcaattaacatcttacacttgtctgtggataagataacttcatacaaattaagctttttctctggtcagaatacagattt  13826200                                                     <---------AHL20(2)                                                     --------->AHL20(1)                                                     <---------AHL20(1)                                                    <---------AHL20(2)                                                    --------->AHL20(2)                                                 --------->AHL20(1)                           <---------AHL20(2)    --------->AHL20(2)                          --------->YAB1         <---------AHL20(1)                          --------->AHL20(2)     <---------AHL20(2)                          <---------AHL20(2)    --------->AHL20(2)                      <---------AHL20(2)        <---------AHL20(2)              <-----------GT1                      --------->AHL20(2)    <---------AHL20(2)                 <---------YAB1                  --------->ICU4            --------->AHL20(2)--------------->AGL15                --------->AHL20(2)       --------->AHL20(2)   <----------DOF2<---------ICU4                --------->YAB1          <---------AHL20(2)    <---------------AGL15<----------DOF2              --------->AHL20(2)    --------->MYB46(3)<---------AHL20(2)     <--------HAHB4         -             --------->YAB1--------->AHL20(2)--------->AHL20(2)   <----------DOF2  <---------DAG2   <       --------->ZAT6--------->AHL20(2) --------->AHL20(2) <-----------GT1  <---------YAB1          < ------TOE2(3)--------->AHL20(1)  ----------->RAV1(1)--------->AHL20(2)  --------->ICU4       -------   agatttctaacacaaaaataatatttaattaaaatccaacaaataaataaataaattaatttttctttctttggaagtattattactttttcacattgac  13826300                                                  <---------ZAT18                       <------------CBF       --------->ARR11(3)                  <---------REM1(2)      ------------>CBF    <-------TEIL   --------->ZAT6                        --------->ETT(2)        --------->YAB1       <---------ZAT14   <-----------GT1                     <---------ARR11(3)        <-----------GT1   <---------ANAC58 -------->AHL20(2)      <-----------GT1--------->ARR11(3)<---------ANAC46          <---------ANAC58 ---------ICU4 <----------DOF2       --------->MYB59     <---------ANAC58          <---------ANAC46 ---------AHL20(2)     <---------AHL20(2)<---------ETT(2)<---------ANAC58 ---------->DOF2    -------- -->YAB1  <----------DOF2     <-----------------AGL1  <----------DOF2  --------->YAB1 --------->ZAT18   aattaatactatcttttctttatatttaacttaacaaataaggtctacatagggtactttcgtctaatcacaattttaaagccatgcgtgcattgcctta  13826400                                                                           ------>MYB83                                                <---------ARR14(2)         ------>MYB46(1)                                                --------->ARR14(2)        --------->WOX13(1)                                                --------->GLK1(2)    <---------ETT(1)                                               <---------GLK1(2)  <-----------GT1                                           ---------->DOF2   <---------GLK1(2)                                   --------->ZAT14           <---------ARR11(3)                   <--                                   <---------ZAT14           --------->ARR11(3)    <---------ANAC46                                  ----------->RAV1(1)   *TSS<---------RVE1(1)    <-----------HVH21---                                 --------->bZIP60(2)  ----------->RAV1(1)--------->AtMYB61        ---                               ----------->RAV1(1)--------->TOE1(2)  ----------->HVH21        -------     <-----------GT1<---------ATHB12<---------ALFIN1 ----------->HVH21------>NtERF2--------->ETT(1) ->TOE2(3)       <---------ALFIN1--------->ANAC46 --------->TOE2(2)  --------->DEAR3(1)      --------   gtctatataacttattctcccactcatcgactgccacaacactcgtaaagaatctgcgacagagattttctccgaccaatccatgtcggaaaacatggtg  13826500       --------->ARR14(2)       <---------ARR14(2)                                                          ------>NtERF2       <---------GLK1(2)                                                          --------->DEAR3(1)     --------->LBD16                                                            ------>ZmHOX2a(1)   <---------LBD16            <---------ZAT14                                   <---------ATERF1(1)  --------->MYB52(1)          <---------ZAT18                                  <---------ALFIN1  -------->P                  --------->ZAT14                              <---------At4g35610 -------ARR14(2)         --------->ZAT14                                   --------->ZAT2       <---- ------>ARR14(2)         <---------ZAT14                                   <---------ZAT2     <------ ---->TEIL           <------ZmHOX2a(1)           --------->MYB46(3)        --------->At4g35610------- -->At5g28300    <---------TOE2(1)            <-----------GT1           ------>ZmHOX2a(1)   --------- --->GT1         <---------TOE1(1)      --------->WRKY12             ------>ZmHOX2a(1)<-----------RAV1(2)   aatctaccggattctttgtacgaggactacagtaaactcaagttgacttcaccctccaacgcttcttcatcctcctcagctcctccgcccaggctcagcg  13826600                                  <------MYB46(1)          --------->MYB52(1)      <------MYB83  <---------At4g35610   <---------YAB1         --------->YAB1 -------HVH21        <---------YAB1           <-------TEIL ---At4g35610        --------->ICU4  <---------DEAR3(1) -->At4g35610------->GAMYB       <---------MYB46(3)                            --------->At4g35610 ->CDC5 --------->MYB46(3)      --------->ALFIN1                               <---------At4g35610   tcgtagctcatccaacggtagagatgattatccagtgggtctgtgatattcataaaccgaagtcatacatgtctgattttgcgctgcataatctcgccta  13826700                                                                   <---------YAB1                   -           <---------ARR14(2)                              <---------ANAC58                 <--------           --------->ARR14(2)                              <---------ANAC58                ------>ZmHOX2a(2)        --------->MYB46(3)                               <-----------HVH21                 ==========      ----------->RAV1(1)                               <-----------RAV1(1)              <---------ARR11(3)     <----------ID1                                    ------>ZmHOX2a(2)                 --------->ARR11(3)    --------->ZAT18            <---------YAB1         <---------At4g35610           <----------DOF2 -   tgtaagtgcaacaaatactcttcgatgctctctatgtttgatatggtttttgtttgatctgtcgtctctatgtttgattcaacatgcttttgatctttga  13826800                                                                                <---------ANAC58                                                                                <---------ANAC58                                                                           --------->MYB52(2)                                                                         <---------MYB52(1)                                                                    ------>ZmHOX2a(2)                                                <---------YAB1     --------->GLK1(1)                                             <---------------AGL15 <------ZmHOX2a(2)                                             <---------YAB1        <---------GLK1(1)   <---------ATHB12                          --------------->AGL15--------->ARR14(2)   <---------YAB1                           <-----------------AGL1<---------ARR14(2) ------>ZmHOX2a(1)                          <-----------------AG  --------->ARR14(3) -------->TOE2(2)                           <-----------------AGL2<---------ARR11(3) --DOF2   --------->TOE2(3)                 <-----------------AGL3--------->ARR11(3)           <----- =======HOX2a_HOX2a             <------------------------ANAC81   <---------ARR14(3)      <---------TOE2(2) -------->TOE1(2)       ---------->DOF2   <-----------GT1 --------->GLK1(2)<---------MYB46(3)--------   atcctatgaatacattagtttttgagaaaagttttttttttttttttctgattatgggaaattcttgagatctccgtttgtttcttgctgcataggttaa  13826900                                                                                       ----------->HVH21                                                                                      <---------WOX13(1)                                                                                      <--------------                                                                                 <-------GAMYB                                                                                 <---------ANAC58----                                                      <---------ARR11(3)        <---------MYB46(3)---                                                      --------->ARR11(3)        <------MYB46(1)  ----                                                   <---------WOX13(1)  --------->TOE2(3)         <---                                                 --------->ATHB12<-----------ARR10   <---------ANAC46                                                <---------ATHB12 <---------ARR11(1)  <---------ANAC58                                                <---------YAB1   <---------ARR14(2)  <---------ANAC58                    <---------ARR11(3)     <------NtERF2         --------->ARR14(2)  <---------AtLEC2               --------->AHL20(1)         <-----------HVH21      ------->TEIL   <------MYB83     <--- <----------DOF2    --------->ARR11(3)    ------>NtERF2  <---------AHL20(2)    <---------AtMYB61 <--- ----DOF5.7(2) --------->AHL20(2)        --------->RAP2.3(3)    <---------CCA1(2)<---------ANAC58---- ->DOF5.7(2)   <---------AHL20(1)        --------->DEAR3(1)     <---------ARR14(1)<--------P    <----   cgtctttatccctacaatataatatcatctactctcgttttcgccgtcaaatgatagattttattcgtatctatcttagatttggttgcttgacatggaa  13827000  Previous    Next  AGI:  At2g32550.1    Description:  rcd1-like cell differentiation family protein. similar to rcd1-like cell differentiation protein, putative [Arabidopsis thaliana] (TAIR:AT5G12980.1); similar to AGAP012050-PA [Anopheles gambiae str. PEST] (GB:XP_320477.4); contains InterPro domain Cell differentiation proteins, Rcd1-like (InterPro:IPR007216) Range:  from: 13826456    to: 13829916    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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