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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
AHL20(2)
<---------
ANAC58
-------->
HAHB4
<---------
ANAC58
--------->
YAB1
<---------
ICU4
<---------
YAB1
----------->
GT1
<-----------
GT1
<--------
HAHB4
--------------->
AGL15
--------->
AHL20(1)
<---------
ICU4
-
<---------------
AGL15
<---------
AHL20(1)
<---------
YAB1
<
---------------->
AGL2
<---------
ARR11(3)
--------->
ICU4
---
---------------->
AGL3
<---------
AHL20(1)
--------->
YAB1
<--
-----------------
AGL2
--------->
AHL20(2)
--------->
AHL20(1)
--------->
DAG2
-------
--
AHL20(2)
--------->
ICU4
<---------
ICU4
--------->
TOE2(3)
---------->
DOF2
<---------
TOE2(3)
atactaaaaatagtaaatattgcttactcacaattacatagaaaaccacaatatatattaccaggtctaaaagtgtcataattatagattaagaaattat
13826100
<---------
AHL20(2)
<---------
YAB1
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
At5g28300
-------->
ZAT18
--------->
ARR11(3)
<---------
DAG2
---------
ZAT14
<---------
ARR11(3)
<----------
DOF2
------>
At4g35610
<-----------
GT1
<---------
TOE2(3)
-------
At4g35610
--------->
YAB1
<---------
TOE1(3)
-->
YAB1
--------->
AHL20(2)
--------->
ZAT6
--------->
AtLEC2
<---
agctcactgtaatataattctcaattaacatcttacacttgtctgtggataagataacttcatacaaattaagctttttctctggtcagaatacagattt
13826200
<---------
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------->
YAB1
<---------
AHL20(1)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
AHL20(2)
<-----------
GT1
--------->
AHL20(2)
<---------
AHL20(2)
<---------
YAB1
--------->
ICU4
--------->
AHL20(2)
--------------->
AGL15
--------->
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
<---------
ICU4
--------->
YAB1
<---------
AHL20(2)
<---------------
AGL15
<----------
DOF2
--------->
AHL20(2)
--------->
MYB46(3)
<---------
AHL20(2)
<--------
HAHB4
-
--------->
YAB1
--------->
AHL20(2)
--------->
AHL20(2)
<----------
DOF2
<---------
DAG2
<
--------->
ZAT6
--------->
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
<---------
YAB1
<
------
TOE2(3)
--------->
AHL20(1)
----------->
RAV1(1)
--------->
AHL20(2)
--------->
ICU4
-------
agatttctaacacaaaaataatatttaattaaaatccaacaaataaataaataaattaatttttctttctttggaagtattattactttttcacattgac
13826300
<---------
ZAT18
<------------
CBF
--------->
ARR11(3)
<---------
REM1(2)
------------>
CBF
<-------
TEIL
--------->
ZAT6
--------->
ETT(2)
--------->
YAB1
<---------
ZAT14
<-----------
GT1
<---------
ARR11(3)
<-----------
GT1
<---------
ANAC58
-------->
AHL20(2)
<-----------
GT1
--------->
ARR11(3)
<---------
ANAC46
<---------
ANAC58
---------
ICU4
<----------
DOF2
--------->
MYB59
<---------
ANAC58
<---------
ANAC46
---------
AHL20(2)
<---------
AHL20(2)
<---------
ETT(2)
<---------
ANAC58
---------->
DOF2
--------
-->
YAB1
<----------
DOF2
<-----------------
AGL1
<----------
DOF2
--------->
YAB1
--------->
ZAT18
aattaatactatcttttctttatatttaacttaacaaataaggtctacatagggtactttcgtctaatcacaattttaaagccatgcgtgcattgcctta
13826400
------>
MYB83
<---------
ARR14(2)
------>
MYB46(1)
--------->
ARR14(2)
--------->
WOX13(1)
--------->
GLK1(2)
<---------
ETT(1)
<---------
GLK1(2)
<-----------
GT1
---------->
DOF2
<---------
GLK1(2)
--------->
ZAT14
<---------
ARR11(3)
<--
<---------
ZAT14
--------->
ARR11(3)
<---------
ANAC46
----------->
RAV1(1)
*
TSS
<---------
RVE1(1)
<-----------
HVH21
---
--------->
bZIP60(2)
----------->
RAV1(1)
--------->
AtMYB61
---
----------->
RAV1(1)
--------->
TOE1(2)
----------->
HVH21
-------
<-----------
GT1
<---------
ATHB12
<---------
ALFIN1
----------->
HVH21
------>
NtERF2
--------->
ETT(1)
->
TOE2(3)
<---------
ALFIN1
--------->
ANAC46
--------->
TOE2(2)
--------->
DEAR3(1)
--------
gtctatataacttattctcccactcatcgactgccacaacactcgtaaagaatct
gcgacagagattttctccgaccaatcc
atgtcggaaaacatggtg
13826500
--------->
ARR14(2)
<---------
ARR14(2)
------>
NtERF2
<---------
GLK1(2)
--------->
DEAR3(1)
--------->
LBD16
------>
ZmHOX2a(1)
<---------
LBD16
<---------
ZAT14
<---------
ATERF1(1)
--------->
MYB52(1)
<---------
ZAT18
<---------
ALFIN1
-------->
P
--------->
ZAT14
<---------
At4g35610
-------
ARR14(2)
--------->
ZAT14
--------->
ZAT2
<----
------>
ARR14(2)
<---------
ZAT14
<---------
ZAT2
<------
---->
TEIL
<------
ZmHOX2a(1)
--------->
MYB46(3)
--------->
At4g35610
-------
-->
At5g28300
<---------
TOE2(1)
<-----------
GT1
------>
ZmHOX2a(1)
---------
--->
GT1
<---------
TOE1(1)
--------->
WRKY12
------>
ZmHOX2a(1)
<-----------
RAV1(2)
aatctaccggattctttgtacgaggactacagtaaactcaagttgacttcaccctccaacgcttcttcatcctcctcagctcctccgcccaggctcagcg
13826600
<------
MYB46(1)
--------->
MYB52(1)
<------
MYB83
<---------
At4g35610
<---------
YAB1
--------->
YAB1
-------
HVH21
<---------
YAB1
<-------
TEIL
---
At4g35610
--------->
ICU4
<---------
DEAR3(1)
-->
At4g35610
------->
GAMYB
<---------
MYB46(3)
--------->
At4g35610
->
CDC5
--------->
MYB46(3)
--------->
ALFIN1
<---------
At4g35610
tcgtagctcatccaacggtagagatgattatccagtgggtctgtgatattcataaaccgaagtcatacatgtctgattttgcgctgcataatctcgccta
13826700
<---------
YAB1
-
<---------
ARR14(2)
<---------
ANAC58
<--------
--------->
ARR14(2)
<---------
ANAC58
------>
ZmHOX2a(2)
--------->
MYB46(3)
<-----------
HVH21
==========
----------->
RAV1(1)
<-----------
RAV1(1)
<---------
ARR11(3)
<----------
ID1
------>
ZmHOX2a(2)
--------->
ARR11(3)
--------->
ZAT18
<---------
YAB1
<---------
At4g35610
<----------
DOF2
-
t
gtaagtgcaacaaatactcttcgatgctctctatgtttgatatggtttttgtttgatctgtcgtctctatgtttgattcaacatgcttttgatctttga
13826800
<---------
ANAC58
<---------
ANAC58
--------->
MYB52(2)
<---------
MYB52(1)
------>
ZmHOX2a(2)
<---------
YAB1
--------->
GLK1(1)
<---------------
AGL15
<------
ZmHOX2a(2)
<---------
YAB1
<---------
GLK1(1)
<---------
ATHB12
--------------->
AGL15
--------->
ARR14(2)
<---------
YAB1
<-----------------
AGL1
<---------
ARR14(2)
------>
ZmHOX2a(1)
<-----------------
AG
--------->
ARR14(3)
-------->
TOE2(2)
<-----------------
AGL2
<---------
ARR11(3)
--
DOF2
--------->
TOE2(3)
<-----------------
AGL3
--------->
ARR11(3)
<-----
=======
HOX2a_HOX2a
<------------------------
ANAC81
<---------
ARR14(3)
<---------
TOE2(2)
-------->
TOE1(2)
---------->
DOF2
<-----------
GT1
--------->
GLK1(2)
<---------
MYB46(3)
--------
atcctatgaatacattagtttttgagaaaagttttttttttttttttctgattatgggaaattcttgagatctccgtttgtttcttgctgcataggttaa
13826900
----------->
HVH21
<---------
WOX13(1)
<--------------
<-------
GAMYB
<---------
ANAC58
----
<---------
ARR11(3)
<---------
MYB46(3)
---
--------->
ARR11(3)
<------
MYB46(1)
----
<---------
WOX13(1)
--------->
TOE2(3)
<---
--------->
ATHB12
<-----------
ARR10
<---------
ANAC46
<---------
ATHB12
<---------
ARR11(1)
<---------
ANAC58
<---------
YAB1
<---------
ARR14(2)
<---------
ANAC58
<---------
ARR11(3)
<------
NtERF2
--------->
ARR14(2)
<---------
AtLEC2
--------->
AHL20(1)
<-----------
HVH21
------->
TEIL
<------
MYB83
<---
<----------
DOF2
--------->
ARR11(3)
------>
NtERF2
<---------
AHL20(2)
<---------
AtMYB61
<---
----
DOF5.7(2)
--------->
AHL20(2)
--------->
RAP2.3(3)
<---------
CCA1(2)
<---------
ANAC58
----
->
DOF5.7(2)
<---------
AHL20(1)
--------->
DEAR3(1)
<---------
ARR14(1)
<--------
P
<----
cgtctttatccctacaatataatatcatctactctcgttttcgccgtcaaatgatagattttattcgtatctatcttagatttggttgcttgacatggaa
13827000
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AGI:
At2g32550.1
Description:
rcd1-like cell differentiation family protein. similar to rcd1-like cell differentiation protein, putative [Arabidopsis thaliana] (TAIR:AT5G12980.1); similar to AGAP012050-PA [Anopheles gambiae str. PEST] (GB:XP_320477.4); contains InterPro domain Cell differentiation proteins, Rcd1-like (InterPro:IPR007216)
Range:
from: 13826456
to: 13829916
Orientation: Forward
Links:
TAIR
MIPS
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publications
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