Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        ----------->HVH21                            <---------PCF2                                       <------ZmHOX2a(1)                            <---------ATERF1(1)                              --------->O2                         --------->ALFIN1                               --------->ANAC46                         <-----------RAV1(1)                            --------->ANAC58                    ------->TEIL                             --------->ANAC46<---------O2                    --------->GLK1(2)                     <---------ZAT18   ------>NtERF2   <--------        ---------->DOF2<-----------RAV1(1)          --------->YAB1      --------->ANAC58    --------- --------->YAB1    --------->ARR11(3)             --------->AtLEC2<---------MYB52(1)--------->ATERF1(1)   tattcaaaatgaaagttttaagaacctgtggggctccatggatgcagtattcatgcataatccactccgttctctcgccacgaggagcccgaccgatatg  11688600                                                                                                  <--                                                                                                <----                                                                                               ------                                                                                              -------                                                                                              <------                                                                                           <---------DEAR3(1)                                                                                         <---------ANAC58                                                <---------ZAT18                          <---------ANAC58                                              --------->ANAC46                      <---------ANAC46                                      --------->ARR14(2)                            --------->ALFIN1                                      <---------ARR14(2)                        <---------ZAT2-------                                    --------->LBD16                       <---------ARR14(2) --------                                   --------->LBD16                <----------DOF2   <-----------RAV1(1)                                  <---------LBD16 <---------At4g35610     --------->ARR14(2) --------                                  --------->HSFB2a(2)   <-----------GT1   <---------ARR11(3) <-------                                  <---------HSFB2a(2) <----------DOF2     --------->ARR11(3)<-------- -ARR14(2)             --------->MYB46(3)   --------->ZAT6   <---------MYB52(1) --------->ZAT2<------ >ARR14(2)             <---------MYB111(2)<-----------GT1    <-----------HVH21------>ZmHOX2a(1)------   aaatacaagcgttctcttggttccaacaacttggttcccggatttaacactccgctctttaccggtcgctttccaatatcctagctgtgtggctcgccgg  11688700     ----------------->AGL1     <-----------------AGL1  ----------->HVH21 --------DOF2 --NtERF2 --->LBD16 -->DEAR3(1)            <---------ALFIN1 ---DEAR3(1)--------->LBD16 -->ATERF1(2)         ------>ZmHOX2a(1) ->DEAR4(2)<---------ANAC58 ->ATERF1(1)<---------------AtSPL3           --------->AtMYB61 --LBD16   <---------ANAC46               <-----------GT1 -ATERF1(1)<---------ANAC58          ----------->GT1 ---ATERF1(2) <---------MYB52(1)--------->LBD16                            ------>ZmHOX2a(1) >NtERF2 --------->ALFIN1  <---------ALFIN1 --------->MYB46(3)         --------->ARR14(2)   ctttgtgacccgtgcgggtacttcctccccctcgcgcagaagtaaaaccactcgttctccgatttcagtttcgattcctctgttttataggcacaaacat  11688800                                                              --------->O2                                                              --------->TGA1a                                                              --------->ANAC58                                                              --------->ANAC46                                                              --------->ANAC58                 ------                                                             <---------LBD16                  <------                    --------->YAB1                     --------->ANAC58                     ---------                    <---------------AGL15              --------->ANAC58  ----------->GT1  --------->At4g35610            ---------->DOF2  ---------->DOF2    ----------->RAV1(2)    --------------------->WRI1          --------->MYB46(3) ===========================================bZIP_DOF          <---------At4g35610       <---------ZAT18 =================================================bZIP_DOF      --------->AtMYB61       --------->ZAT18 ---------->DOF2   ----------->GT1    <---------ALFIN1  --------->ARR11(3)   tcaaattagtgaaccaaagtaaacataaagagaaagaaaaccgaagtaaaacctggcaagtcccacggctcgaacttgtaaatctcgacctcagcaatca  11688900                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              <------       --------->GLK1(1)              <---------------AtSPL8                                  >>>>>>>    ------->GAMYB                     <---------------AtSPL3                     <---------LBD16 <--- ----------->RAV1(1)                 --------->ARR11(3)                 --------->GLK1(2)     >>>>>>> --->YAB1                            <---------ARR11(3)   --------->TOE2(3)      --------->TOE1(2)--- ---ATHB12                   <----------ID1<---------TOE1(1)           <---------GLK1(2) ---------->DOF2 >WOX13(1)                 <-----------GT1 <---------TOE2(1)      <------ZmHOX2a(1)--------->ANAC46   cagcaacagagttctcatcaccatcgattttacgacgaagatagtacgagataagttcaacatcagtaggagagaatctaaaaccagggaacaaagccga  11689000      --------->ETT(2)      <---------ETT(2)     <------ZmHOX2a(2) --------->LBD16 >NtERF2 ----RAP2.6(3) ----ATERF1(1) ------HVH21 -->RAP2.6(2) -->DEAR3(1)                                       <------ZmHOX2a(1) ---->HVH21                                     <-----------RAV1(2) ---ETT(1)           <----------DOF2   <----------DOF2                <----------DOF2 >>>DREB1A       <---------GLK1(2)    ====================HOX2a_HOX2a<---------ANAC58 ------ALFIN1   <---------At4g35610   ------>ZmHOX2a(2)              <---------ANAC58        <------- >>>DREB2A      --------->At4g35610 --------->ARR11(3)           <----------DOF2             -------- --->NtERF2     <---------ZAT2      <---------ARR11(3)  ----------->GT1                  <---------ANAC46   caccgcgatcgacatctcagcttctttagacattgtttgatctttttggctcaggaactcgaaaatactttgctttagatgaagaaacatgccttataaa  11689100                                                                 <----------ID1    ------------>CBF                                                            <-----------RAV1(2) --------->ALFIN1                                                          <-----------HVH21   <---------ANAC58                                                        <------NtERF2         <---------bZIP60(2)                                                        --------->At4g35610   <---------TGA1a                                                        --------->ATERF1(1)   <---------ANAC46                       <---------HSFB2a(2)             <---------ERF1         --------->O2                   <---------ANAC58                    <---------RAP2.3(1)    <---------O2                   <---------ANAC58                    ------>NtERF2 ===================bZIP_DOF               <----------DOF2                         <---------ATERF1(1)    <---------ANAC58          --------->At4g35610      <---------ANAC46   <---------DEAR3(1)     ----------->bZIP911(1)          <---------ZAT2     <---------TOE2(3)        <---------RAP2.3(2)    ----------->STF1       <---------At4g35610 ---------->DOF2            <---------RAP2.3(3)   <---------TGA2(2)      --------->ALFIN1 --------->HSFB2a(2)            <---------RAP2.6(2)  ----------->HVH21     --------->ZAT18 <---------LBD16                  <---------ANAC46     ----------->TGA1 --YAB1<---------ZAT14<---------ANAC46               --------->RAP2.6(3) <------ZmHOX2a(1)        <-- --->TBP  <---------At4g35610<---------TOE1(3)       <---------LBD16 ---------->DOF2            -----   tggcaagtgtgcagctactttgcttcgggtaaaggttttgtgttttttgatatttggcggcttcagagggaaaaaggatgacgtggacaatgactgtaag  11689200                                                                 <------------CBF                                                                --------->ATHB12                                                                --------->ATHB51                                                   <---------ANAC58                                                   <---------ANAC58                                              --------->YAB1    -------->ATHB1                 ------                                             <---------YAB1    <---------YAB1                  <-----                                           --------->YAB1  <---------ANAC55(2)        <---------At4g35610         --------->MYB52(1)          <------ZmHOX2a(1)     --------->ANAC55(2)        --------->At4g35610 ----------CBF      <---------ZAT14 <----------ID1 <---------bZIP60(2)                --------->ZAT2 ---->ICU4       ----------->GT1 ---------->DOF2   <---------ANAC46                   <---------ZAT2   aattgggcgaataacagaagagtgtaatgagatagtaaaggacaaaaatgataacgtggttatgtattattggacagaactcaaacccagctctgaagtt  11689300                                                  <---------ARR11(3)                                                  --------->ARR14(2)                                                  --------->ARR11(3)                                                 <---------GLK1(1)                                                 <---------CCA1(2)       --------->LBD16                                        ------->MYC2                    --------->ANAC58                                        <-------MYC3                    --------->ANAC58                                        <-------MYC4                    --------->ANAC46                                        ------->MYC3                   --------->ANAC46                                        ------->MYC4                   <---------LBD16                                        <-------MYC2                 --------->ANAC46                                       --------->ANAC55(2)          ------->TEIL                                       --------->TGA1a             <-----------GT1   <---------WOX13(1)                  <---------O2            ----------------------->TaNAC69(2)  <------------CBF                     <---------TGA1a        <---------MYB46(3)  <---------ATHB12 --->ARR11(3)        <---------CCA1(2) <---------ANAC55(2)<---------DEAR3(1)--------->ANAC58 ----ARR11(3)  <---------AHL20(2)      --------->O2      ------>ZmHOX2a(1)  --------->ANAC58      ---   ctctcattgatgcttaataaatcgtctcttcatttttaaacacgtgtttcgatatcttcctcggtgtttgtaccccgcatgccaataagtttttgttttt  11689400                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                                                      --------->ARR11(3)                                                                                 <---------AHL20(1)                                                  --------->YAB1                 --------->AHL20(2)                                                 <---------ATHB12             --------->AHL20(1)                                                --------->ANAC58             <---------ICU4                                                --------->ANAC58             --------->ATHB51       <                     --------->YAB1            --------->WOX13(1)            --------->AHL20(2)     <                    <---------YAB1           <------NtERF2                   <---------AHL20(2)    <-        ----------->GT1                     ------>NtERF2    --------->AHL20(2)  --------->AHL20(1)--      <---------ANAC58                     <---------ATERF1(2)              --------->ICU4       ----      <---------ANAC58                     --------->ATERF1(2)       <----------DOF2  <---------ARR11(3)      <---------ANAC46                  ----------->HVH21 ------->TEIL      <---------YAB1   ------>NtERF2 ------->ID1  <-----------GT1------->TEIL --------->RAP2.6(3)<---------AHL20(2)  <---------AHL20(2)<-   gtttttttgggtgtaataacttatcaaaatgaatttttgtttttgacggcaatcaaaatgaatttaaatcactttgtaattattttattatcttgcgcca  11689500  Previous    Next  AGI:  At2g27300.1    Description:  ANAC040/NTL8 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40); transcription factor. similar to ANAC060 (Arabidopsis NAC domain containing protein 60), transcription factor [Arabidopsis thaliana] (TAIR:AT3G44290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48692.1); contains InterPro domain No apical meristem (NAM) protein; (InterPro:IPR003441) Range:  from: 11687495    to: 11689033    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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