Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
<-----------
HVH21
<-------
GAMYB
<-------
PIF5
--------->
MYB55(2)
------->
PIF5
<-------
GAMYB
--------->
bZIP60(2)
<---------
ANAC46
--------->
O2
<---------
ANAC58
<---------
O2
<---------
ANAC58
<---------
TGA1a
--------->
MYB52(2)
--------->
ANAC58
--------->
MYB55(2)
--------->
ANAC58
<------
MYB46(1)
--------->
TGA1a
<---------
MYB46(3)
====================
bZIP_DOF
<------
MYB83
<---------
ALFIN1
<---------
TOE1(3)
------->
ATERF1(1)
--------->
ANAC58
<---------
MYB46(3)
-----
NtERF2
--------->
HSFB2a(2)
--------->
ANAC58
--------->
MYB111(2)
-------
ATERF1(1)
--------->
LBD16
<---------
ALFIN1
<---------
AtMYB61
-------
DEAR3(2)
------>
ZmHOX2a(1)
--------->
ANAC58
--------->
MYB111(1)
------
DEAR3(1)
<---------
LBD16
<------
ZmHOX2a(1)
<---------
TOE2(3)
-----
ORA47(1)
----------->
RAV1(2)
--------->
ANAC58
<--------
P
<-------
--
AtMYB61
<----------
DOF2
<---------
TOE2(1)
--------->
DAG2
<--------
-
DOF2
------>
ZmHOX2a(1)
<---------
TOE1(1)
--------->
YAB1
<---------
MYB52(1)
cggccacgtcctcgctttcctggaccagtactaggaccagcactcgcatcataaggttggttgttgaattgatcaaatggtcttctgttttgtagtggtg
10538600
<------
NtERF2
<---------
ANAC46
<---------
ANAC58
<---------
ANAC55(1)
<---------
REM1(1)
<-----------
RAV1(1)
<---------
WOX13(1)
<---------
At4g35610
--------->
ATHB12
--------->
At4g35610
<---------
YAB1
--------->
ALFIN1
<---------
ANAC58
--------->
HSFB2a(2)
--------->
ALFIN1
<---------
DEAR3(1)
<---------
ANAC58
--------->
DREB2C(2)
<---------
DEAR3(1)
<---------
ANAC58
<---------
ANAC58
<------
ZmHOX2a(1)
--
MYB46(3)
<------
ZmHOX2a(1)
--------->
ALFIN1
<---------
HSFC1(2)
<---------
TOE1(1)
--
-
ZAT6
<---------
ANAC55(2)
<---------
ANAC58
--------->
HSFC1(2)
<---------
TOE2(1)
<---
agaccattacatgaggaggtgctgatgttgcgtgggcgtcttcattgacttcatgagatgcttctcggtctattggactagtactaggaccggcatctcg
10538700
<-------
TEIL
<------
NtERF2
<---------
ORA47(2)
<---------
DEAR3(2)
<---------
MYB46(3)
<---------
DEAR3(1)
<---------
DREB2C(2)
<---------
ANAC58
<---------
ANAC58
<---------
ANAC46
<---------
ANAC46
<---------
ANAC58
<---------
ABI4(1)
<---------
ANAC58
----
--------->
MYB52(2)
<---------
ANAC55(1)
<---
<-----------
RAV1(1)
<-----------
RAV1(1)
-----
------>
ZmHOX2a(1)
--------->
ALFIN1
<---------
TOE2(3)
<-----
------->
YAB1
<---------
AtMYB61
<------
ZmHOX2a(1)
------->
GAMYB
--------
HVH21
---------->
DOF2
--------->
At5g28300
<---------
REM1(1)
--------->
TOE2(3)
gtcataagagtcctcaatgttgaagttatctaatagccaaagggtttgtggcggtgcatgaggaggtattgatgttgcgtgggcttcttcattaacagca
10538800
<-
<---
<----
<----
<----
<-----
<-----
<----------
DOF2
<-----
------>
ZmHOX2a(2)
<-----
===================================
HOX2a_HOX2a
<-----
--------->
ARR11(3)
<---------
GLK1(2)
<------
<---------
ARR11(3)
--------->
ANAC58
--------->
ALFIN1
----->
At4g35610
<---------
TOE1(1)
--------->
YAB1
<----------
------
At4g35610
<---------
TOE2(1)
<-----------
HVH21
--------->
MYB52(2)
---->
GLK1(2)
<---------
ZAT14
--------->
ANAC58
<---------
AtMYB61
----
GLK1(2)
--------->
ZAT14
<------
ZmHOX2a(1)
------>
ZmHOX2a(1)
---------->
DOF2
----
tctgatctttctctgtggactggaccagtactaggaccagcatctcggtcataagagtcctcaatgttgaagttatctaatagccaaagggtttgtggcg
10538900
<---------------
AtSPL3
<------
ZmHOX2a(1)
------
TEIL
---
NtERF2
-----
DEAR3(2)
-----
ORA47(2)
-----
MYB46(3)
----
ANAC46
<---------
ANAC58
--------->
GLK1(1)
----
ANAC58
<---------
ANAC46
--------->
At4g35610
----
DEAR3(1)
<---------
ANAC58
<---------
GLK1(2)
----
ANAC58
<---------
ANAC55(1)
--------->
ZAT14
--------->
ANAC58
----
DREB2C(2)
<-----------
RAV1(1)
--------->
ARR11(3)
<---------
TOE1(1)
---
ABI4(1)
<---------
TOE2(3)
<---------
GLK1(2)
<---------
TOE2(1)
--------
-
RAV1(1)
--------->
ICU4
------->
GAMYB
<---------
ZAT14
--------->
ANAC58
----->
At5g28300
<---------
REM1(1)
--------->
TOE2(3)
<---------
ZAT18
<------
ZmHOX2a(1)
gtgcatgaggaggtactgatgttgcgtgggcttcttcattaacagcatcagatttttctcggtggactaaaccagtactaggaccagcatctccatcatc
10539000
<------
MYB46(1)
<------
MYB83
--------->
MYB111(2)
<---------
AtMYB61
--------->
YAB1
--------->
ALFIN1
<------------
CBF
<---------
ATHB12
<--------
P
<---------
YAB1
<---------
ANAC46
<-------
GAMYB
----------->
GT1
<---------
REM1(1)
--------->
WOX13(1)
--------->
TOE2(3)
--------->
ZAT14
--------->
ARR11(3)
------------>
CBF
->
YAB1
--------->
YAB1
--------->
ALFIN1
<---------
ZAT14
<---------
ARR11(3)
--------->
WRKY38(1)
---
aaatagcattaatagggttggaggtgttgagaccat
tactgtagttaatattgtctactaaatcttgttgtaactggtgttgactcaatcagaatagact
10539100
<---------
AHL20(2)
--------->
AHL20(2)
<---------
ICU4
<--------
HAHB4
---------->
DOF2
--------->
ATHB51
----------->
TBP
--------->
ICU4
<---------
YAB1
<---------
YAB1
--------->
YAB1
--------->
YAB1
<---------
ICU4
<---------
ICU4
<---
--------->
YAB1
--------->
WOX13(1)
<-----
<--------
HAHB4
------------>
CBF
--------->
AHL20(2)
<-----
<---------
YAB1
--------->
GLK1(1)
<---------
AHL20(2)
<------
--------->
GLK1(1)
--------->
ARR11(3)
<---------
RVE1(1)
<---------
ICU4
<---------
GLK1(1)
---------->
DOF2
<---------
ATHB12
<---------
CCA1(1)
<---------
YAB1
---------->
DOF2
<---------
YAB1
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ICU4
<---------
MYB46(3)
<---------
ATHB12
--------->
At4g35610
<---------
ARR14(2)
--------->
YAB1
------>
MYB52(1)
------>
ZmHOX2a(1)
<---------
At4g35610
<---------
ARR11(3)
<---------
YAB1
tatcggttgcaaaagaaatcctatcattataaaaagaaaagtcagatatcaatcataattaaacaagaagatatttaaaaactattttgtgataattaac
10539200
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
ARR14(2)
<---------
AGP1
--------->
AGP1
<---------
ARR14(2)
<------------
CBF
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
-------
--------->
YAB1
--------->
AHL20(1)
--------->
WOX13(1)
-
<---------
YAB1
<---------
AHL20(1)
--------->
WRKY18(1)
<
<---------
YAB1
--------->
AHL20(2)
<---------
ANAC58
--------->
ANAC58
------------>
CBF
--------->
AHL20(2)
--------->
ARR11(3)
<---------
ANAC46
------------>
CBF
----
---------
CBF
<---------
AHL20(2)
<---------
ARR11(3)
<---------
ANAC58
--------->
ANAC58
<----
----
YAB1
<---------
ARR11(3)
<---------
AHL20(2)
<---------
ANAC55(2)
--------->
ANAC58
----
TOE2(3)
----------->
RAV1(1)
------------>
CBF
<---------
AHL20(2)
--------->
ANAC58
-----
-----
GT1
--------->
ANAC46
--------->
AHL20(2)
<---------
CCA1(2)
--------->
TOE2(3)
--------->
ANAC46
attgtgacaatattcaaacaacatattattataaaattgcataacaatatattcagatctaaattacttgaaacattagtcaagcaatttacgcaaaaat
10539300
<-----------
TBP
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<-----------
TBP
<---------
AHL20(2)
--------->
AHL20(2)
<-----------
TBP
<---------
AHL20(2)
---
--------->
AHL20(2)
--------->
ANAC58
<------
--------->
AHL20(2)
<-----------
TBP
--------->
ANAC58
-------
-->
YAB1
<-----------
TBP
--------->
ANAC58
--------->
ARR11(3)
<-------
-------->
AHL20(2)
--------->
AHL20(2)
--------->
TOE1(3)
--------->
ANAC58
--------->
YAB1
---------
AHL20(2)
<---------
AHL20(2)
--------->
TOE2(3)
--------->
DAG2
--------->
ANAC58
----->
AHL20(2)
<-----------
TBP
<-----------
GT1
---------->
DOF2
--------->
ANAC58
-----
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
ANAC55(2)
--------->
MYB52(1)
---
---->
AHL20(2)
<---------
AHL20(2)
<-----------
TBP
<-------
TEIL
--------->
AHL20(2)
<---------
ATHB12
aaataaataacatatatatatatatatatacacatatatatacctcaacacgaacgatacataaagcaataacatattgaaacaacgaatcaagcatata
10539400
<---------
GLK1(2)
<---------
ARR14(2)
<------
ZmHOX2a(2)
<------
ZmHOX2a(1)
=============
HOX2a_HOX2a
---------->
DOF2
<---------
ZAT6
<-
------>
TOE1(3)
<---------
ARR14(2)
---------->
DOF2
<---------
ANAC46
---
ARR14(2)
--------->
ARR14(2)
--------->
ANAC58
--------->
ARR11(3)
----
-->
ARR14(2)
---------->
DOF2
----------->
GT1
--------->
ANAC58
<---------
ARR11(3)
<-----
---
TaMYB80
--------->
AHL20(2)
------>
ZmHOX2a(2)
--------->
ANAC58
--------->
YAB1
<---------
TOE2(3)
------>
TOE2(3)
<---------
ATHB12
<------
ZmHOX2a(1)
--------->
ANAC58
<---------
YAB1
<---------
TOE1(3)
ccttaaaactgaaattcaataaagaagacggatcgaaggagaagagaaaattggaagcaagaaagaaaggattctatgatattgtagagtgaaggttatc
10539500
Previous
Next
AGI:
At2g24740.1
Description:
SDG21 (SET DOMAIN GROUP 21). Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH8 (SUVH8) [Arabidopsis Thaliana] (GB:Q9C5P0;GB:Q9TP24); similar to SUVH7 (SU(VAR)3-9 HOMOLOG 7), histone-lysine N-methyltransferase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G17770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46198.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SRA-YDG (InterPro:IPR003105); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637);
Range:
from: 10536769
to: 10539036
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version