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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                       <---------ANAC58
                                       <---------ANAC58                                   <-------TEIL
                               --------->ZAT2                                            --------->ARR14(1)
                               <---------ZAT2                                           <---------GLK1(2)
                              --------->ANAC58                                          <---------ARR14(2)
                              --------->ANAC58                                          --------->ARR11(1)
                              --------->ANAC46                                          --------->ARR14(2)
                  ---------->DOF2  <---------HSFB2a(1)                    --------->HSFB2a(2)
                  <---------AHL20(2)  <-------TEIL      <---------At4g35610    --------->ZAT6
                 --------->AHL20(2)--------->HSFB2a(1)  <-------GAMYB     <---------HSFB2a(2)<------
 
aaatagggtttaagagcccattaaatcagagcccagcaacgttcgtgtttgttttgttcagttgatatagaaccagtctcgaactctagtagattcgttg  9962300
                                                                   --------->ANAC58
                                                                   --------->O2
                                                                   --------->ANAC46
                                                                   ================================bZIP_DOF
                                                                   --------->ANAC58
                                                                   --------->bZIP60(2)
               <---------LBD16 --------->LBD16                     <---------TGA1a      <----------DOF2
             --------->GLK1(2)--------->DEAR3(1)                   --------->TGA1a      <---------DAG2
          <---------ARR11(3) <---------LBD16                       <---------O2       ------>MYB83
      --------->ANAC55(2)    --------->ATERF1(1)                 <---------ALFIN1     ------>MYB46(1)
      --------->O2          ------>NtERF2----------->GT1       <-----------HVH21    <---------ALFIN1
      <---------O2          <---------ATERF1(1)                ------>NtERF2        <---------MYB111(2)
      <---------ANAC46     <---------DEAR3(1)                 >>>>>>>>>AtERF-4      --------->AtMYB61
      <---------ANAC55(2)  --------->DEAR3(1)                 >>>>>>>>>AtERF-3      --------->MYB46(3)
     <-------TEIL         --------->ATERF1(1)               --------->ZAT2          <---------MYB111(1)
  --------->ZAT2         <-----------HVH21                  <---------ZAT2   <-----------GT1       -
  <---------ZAT2 --------->LBD16<------NtERF2               --------->At4g35610    --------->MYB46(3)
---MYB52(1)<----------TaMYB80<------NtERF2                  <---------At4g35610  --------->ANAC46  <
 
tctcgagctacgtgatattccggtaaaccgtcgccggagatgtacagtagataattcaaatcgagctgccacgtcgctattttcccaccaactttttttt  9962400
                ----------------------->TaNAC69(2)
             --------->DAG2
            ---------->DOF2
    --------->ATHB51
    <---------ICU4                                                                                 -
    -------->HAHB4                                                                                 <
    --------->ATHB12               ------------>CBF                                               <-
    <--------ATHB1                ----------------->AGL1                   <---------AHL20(2)     --
   --------->AHL20(2)        --------->ANAC58                       --------->ANAC58              --
   <---------ATHB51          --------->ANAC46                ----------->GT1                      <-
   <---------AHL20(2)        --------->ANAC58              ---------->DOF2<---------AHL20(2)      --
-------->AHL20(2)          <-----------GT1             <----------DOF2    --------->AHL20(2)  ------
---------AHL20(2)        <-----------GT1      ------------>CBF      --------->ANAC58        --------
 
ttttaaataattggaaaaagtttctaatttacacgcttcccaattcgtaaacaatgttctttaaaagtaaaacgaaattttttttggatttgaagataaa  9962500
                                                                                                 ---
                                                                                                <---
                                                                                               <----
                                                                                               -----
                                                                                               <----
                                                                                               -----
                                                                                               <----
                                                                                               <----
                                                  --------->LBD16                              <----
                                                  ------>NtERF2                               <-----
      --------->AHL20(2)                         --------->ANAC58                             <-----
-------->CCA1(2)                                 --------->ANAC58                            -------
------ZmHOX2a(2)                                 --------->ANAC46                        ------>NtERF2
--------ARR14(2)                                <---------MYB55(2)                     ----------->HVH21
------->ARR14(2)                                --------->MYB46(3)                    <---------HSFB2a(2)
------->AGP1                                 ------->GAMYB                        --------->GLK1(1)
--------ARR11(3)                          <-----------GT1              ----------->RAV1(1) <--------
------->ARR11(3)                  <---------TOE1(3)>>>>>>>>>E2Fd    ================================
---->DOF2                --------->AHL20(2) --------->MYB46(3)      ================================
->CCA1(2)       <------------CBF  <---------TOE2(3)>>>>>>>>>E2Fc    ------>ZmHOX2a(1) --------->HSFB2a(2)
 
agatccaaaataaaaacaaaattgaagataaatttttagggtttataacgacccgccaaattccttctctcctccaacatttcagatttcgcgacccgga  9962600
          --------->ANAC58
       <---------TCP15(1)
       <---------ARR14(2)
       --------->ARR14(2)
       <---------TCP20                                   <---------HSFB2a(1)
     --------->LBD16                                     --------->HSFB2a(1)                    ----
    --------->ANAC46                                     <---------HSFC1(2)                   ------
   <---------LBD16                                       --------->HSFC1(2)                   <-----
--->ZmHOX2a(2)                                      <-----------RAV1(2)                      -------
---ZmHOX2a(2)                                      <------NtERF2                             -------
-------ARR10                                      <-----------HVH21                         ------>NtERF2
---->ARR14(2)                                     <-----------TGA1                         <--------
-----ARR14(2)                                    <---------bZIP60(1)                      --------->ATERF1(1)
---->ARR11(3)                                    --------->bZIP60(1)                      --------->MYB46(3)
-----AGP1 --------->ANAC58               <<<<<<<<<<<<<<<<<LFY                            <---------ATERF1(1)
-----ARR11(3)                         <---------ANAC58  <-----------ARR10                ------>NtERF2
-----ARR11(1)                  ------>ZmHOX2a(2) --------->TGA2(1)                   ------>ZmHOX2a(2)
----ARR14(1)                  <------ZmHOX2a(2)  <---------ANAC46                   <------ZmHOX2a(2)
----CCA1(2)--------->LBD16   --------->ARR14(2)  <---------ANAC58             ----------->RAV1(1)
-->LBD16 <---------LBD16     <---------ARR14(2)  <---------ANAC58             ------>NtERF2---------
-LBD16 --------->PCF2   <---------ARR14(2)      <-----------------------TaNAC69(2) <---------ARR14(2)
====HOX2a_HOX2a         --------->ARR14(2)------------>CBF           <<<<<<<<<TBF1 --------->ARR14(2)
===HOX2a_HOX2a     <-----------GT1    <---------ANAC58<---------At4g35610  ------>NtERF2--------->PCF2
 
tcttaacccggacccgcatttgtttcggttccgatctggtttcttgacaatggcgtcagaagcttcgccttcttcttcggccaccagatcggagccaccc  9962700
                                           <---------------AGL15
                 <---------ATHB12          --------->HSFB2a(2)
           <---------ANAC58                <---------HSFB2a(2)
           <---------ANAC46                --------------->AGL15
        <---------MYB52(1)                ----------------->AG<----------DOF2
     <---------LBD16<---------MYB52(1)    <-----------------AGL1
------>DOF2<---------ANAC58               ----------------->AGL2
--->MYB46(3)   --------->WOX13(1)         ----------------->AGL3
----MYB55(2)<-----------HVH21             <-----------------AGL2                              <-----
-->ANAC58 <-------TEIL                    <-----------------AGL3                             <------
-->ANAC58 --------->SPL7               <----------DOF2     <-----------GT1             --------->ATHB12
-ALFIN1--------->LBD16              <-----------GT1    <----------DOF2              <----------DOF2
>DEAR3(1)--------->ALFIN1       <-----------GT1        <---------DAG2     <---------TOE2(3)  <------
 
aaagactctccggtgcgtcaatcgttttttttttttttcttactttctaaaaatggaacttttttctttgtgctattgaggcattgactttgatttgctt  9962800
                                                                        <---------ANAC58
                                                                        <---------ANAC58
      <---------ZAT14       <----------DOF2                   ------>ZmHOX2a(2)
      --------->ZAT14      <---------ANAC46                  <------ZmHOX2a(2)
   <---------ANAC46        <---------ANAC58                 <---------AGP1
-----DOF2                  <---------ANAC58                 <---------ARR11(3)       --------->CCA1(2)
---ANAC58     --------->ANAC58                              --------->AGP1          --------->ARR11(3)
---ANAC58     --------->ANAC58      <---------At4g35610     --------->ARR11(3)      <---------ARR11(3)
 
tagtttgagtgaagagaacgaaactcgatggcttgtttgagcttctctatatgctcgtttttagatctagagattgctggattgtgagatatgaagttgt  9962900
                                                                                           <------ZmHOX2a(1)
                                                                                        <------NtERF2
                                                                                        --------->ATERF1(1)
                                                                                      <---------DEAR3(1)
            <------ZmHOX2a(1)                                   --------->ARR14(2)    --------->ALFIN1
     --------->MYB52(2)                                    ---------->DOF2      <-----------HVH21
    <-------TEIL                     XXXXXXXXXXXXXXXXXXXX>MIR413<---------ARR14(2)<-----------RAV1(2)
 <---------ANAC58      --------->At4g35610               --------->REM1(2)  <---------TOE2(3)
 <---------ANAC58      <---------At4g35610         --------->ZAT6  --------->TOE2(3) <---------LBD16
 
ttttgggttcgtttaggaaccatttttgctgcaattgatagtttctctcattgaacactgtgtaaaggaacctcattttgatgtttcaggcggaggagag  9963000
                                                             <------MYB46(1)
                                                             <------MYB83
                                                        ----------->HVH21
                                                      <---------At4g35610
                                                      <---------ZAT2
                                                      --------->ZAT2
          <---------TOE2(3)                     <---------ANAC58                     <---------YAB1
    <---------GLK1(2)                          <---------HSFC1(2)              <--------P
   <---------At4g35610                         --------->HSFC1(2)           <---------TOE2(3)
   <---------ZAT2  --------->YAB1     ---------->DOF2 --------->At4g35610 ---------->DOF2
<-------TEIL<------ZmHOX2a(1)  <---------GLK1(2)<---------ANAC58         <---------ATHB12
 
aggtccagcttctaaggaagtatcagaagtaatagaatcgctaaagaagaagcttgcagctgataggtgtatatcaataaaggttgctatttttgtttag  9963100
                                  <---------MYB46(3)
                                 <---------WOX13(1)
                              <---------YAB1                         <---------WOX13(1)
                           ------->TEIL                            <------ZmHOX2a(1)
                           <---------ARR14(2)                  ---------->DOF2
                           --------->GLK1(2)              ----------------->AGL3       --------->GLK1(2)
                           --------->ARR14(2)           <-----------GT1            --------->YAB1
 
ttttttttttgtatgttttatgtgtttctgaatctgattgttagaaattgatgtgtttgtaaccagaaaaggattgatgaaaacaagaagaatttgtttg  9963200
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AGI:  At2g23380.1   
Description:  CLF (CURLY LEAF); transcription factor. Identical to Polycomb group protein CURLY LEAF (CLF) [Arabidopsis Thaliana] (GB:P93831;GB:O80455); similar to EZA1 (SWINGER), transcription factor [Arabidopsis thaliana] (TAIR:AT4G02020.1); similar to PHCLF2 [Petunia x hybrida] (GB:BAC84951.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71880.1); similar to PHCLF1 [Petunia x hybrida] (GB:BAC84950.1); contains InterPro domain SET; (InterPro:IPR001214)
Range:  from: 9962650    to: 9967439    Orientation: Forward
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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