Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->AHL20(1)                                        <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                                      <---------AHL20(2)                                   --------->AHL20(2)                                   <---------AHL20(2)                                  --------->AHL20(2)                              <---------YAB1                            ----------->GT1                            --------->YAB1                           ----------->GT1                                                   <-------                 <---------TOE2(3)<---------AHL20(2)                           --------->ARR11(3)                 <---------TOE1(3)<---------AHL20(1)     <---------ZAT6        <-----------ARR10 -------->YAB1  ---------->DOF2--------->YAB1   ----------->GT1          ----------->GT1 ---------->DOF2 ---HVH21   <---------ZAT6 <---------YAB1   <---------YAB1     ----------->GT1 <---------ARR11(3)  --   aaacatgaaaactagttttaaagtttagaatgataataaaattattttgatggtttatagtgttttagtaaaatacagtaatatctacgtttaaagtgtt  8805900                                                                                                  <--                                                                                               ------                              --------->ANAC58                                                 ------                              --------->ANAC46                                         <-----------GT1                        --------->GLK1(1)                                           <---------MYB46(3)           --------->AHL20(2) --------->ANAC58                                      ----------->GT1<-  <----------DOF2   <-----------GT1                       --------->LBD16--------->AHL20(2)    <----- --ZAT6    <---------AHL20(2)--------->LBD16             <XXXXXXXXXXXXXXXXXXXXXMIR864-3P       <----- ------->ZAT6    --------->RVE1(1)                    <-----------GT1    <---------AHL20(2)   <------   aacactttgaaaattaaaaatatcacatttccacgaaaaaaacaatacaggttttttttccaggtataaatgattttaaatacgagttgttactaaatat  8806000                                      <---------ARR11(1) -------AHL20(2)                      --------->ARR11(3) --->AHL20(1)                        <---------CCA1(2) --->ARR11(3)             --------->LBD16             ----------->GT1 ----------->GT1 --------YAB1            <---------HSFB2a(2)   --------->ATHB12  <---------ICU4 ----AHL20(1)            --------->HSFB2a(2)   <---------ICU4   <---------YAB1 ----ARR11(3)            <---------ANAC46     <---------YAB1  --------->YAB1 ---AHL20(2)            <---------LBD16     --------->YAB1    <---------ICU4 <---------AHL20(2)<-----   ttttattcccatgagatttgttatcttccggataaattcaaatctttgatcattgttagtaaaatcatcattttgttatataaaaaaaaaacaattagtg  8806100                                                                                              -------                                                                                             <------NtERF2                                                                                            ------>NtERF2                                                                     <------ZmHOX2a(1)     --------->ANAC46                                                                --------->ANAC46          ------->MYC2                                                                <---------O2              ------->PIF5                                                          --------->KAN4(2)               <-------PIF5                                                         --------->HSFC1(2)               <-------MYC2                                                         <---------HSFC1(2)               <-------PIF4                                                         --------->HSFB2a(1)              ------->PIF4                                                         <---------KAN4(1)                <---------ABI4(2)                                                         --------->KAN4(1)                <-------MYC3                             --------->ZAT2              <---------HSFB2a(1)              ------->MYC3                            ----------->RAV1(1)         <---------KAN4(2)                --------->ANAC58     <----------DOF2 --------->DAG2                 --------->YAB1 <---------TOE2(2)     --------->ANAC46 ----ZAT6           ---------->DOF2          <-----------GT1    --------->O2             --------->ANAC58   agaaacactttgggctatttgaaaaagccccagcatacaaaatttgttaaccattcagaacattccacgtaggaaaattagtggcatttgcacgcgccgt  8806200                                                        --------->HSFB2a(2)                                                        <---------HSFB2a(2)                                                 --------->AtMYB61                  <---------YAB1                --------->MYB46(3)                <---------ICU4             --------->ANAC46                --------->YAB1             --------->ANAC58                               <----------      --------->LBD16                      --------->ANAC58         *TSS ---------->DOF2 <---------ANAC58     <---------ANAC46       <---------CCA1(2)--------->MYB46(3)    <------ZmHOX2a(1)     <---------ANAC58    <---------LBD16  <---------WOX13(1)  --------->DEAR3(1)      <---------TOE2(3)   ---------->DOF2 -->DEAR3(1)   --------->ICU4   <----------DOF2------>NtERF2--------->ANAC46     <----------ID1   tctactcgcgggagagaatgatgactgatcatctcttttaacaccgagccaccatcgtctcgacgctaaggagggaaaagaagagaacaaagcgtgagag  8806300                                   --------->RAP2.6(2)                                   --------->DEAR3(1)                         <---------LBD16                      --------->ARR14(2)                      <---------GLK1(1)                          <---------ZAT18                      <---------ARR14(2)                   <---------DAG2                     <---------GLK1(2)              --------->ARR11(3)                  >>>>>>>ZML2      --------->ANAC46 <---------GLK1(2)                  <---------HSFC1(1)               --------->HSFC1(2)                  --------->HSFB2a(2)              --------->HSFB2a(1)               --------->ARR14(2)  ------->GAMYB   <---------HSFB2a(1)               <---------ARR14(2) --------->MYB46(3)<---------ARR14(2)             --------->LBD16     <---------At5g28300--------->ARR14(2)           <---------LBD16--------->LBD16          <---------HSFC1(2)         <---------ARR14(2)     <-----------GT1   ----------->ARR10                     ------>ZmHOX2a(1)   ----------->GT1<---------HSFB2a(2)    --------->MYB52(1)<----------DOF2  <----------DOF2   <---------ZAT6 --------->HSFC1(1)   <---------SPL7--------->GLK1(2)    <---------At4g35610 -HVH21  --------->ARR14(2)--------->LBD16    --------->ALFIN1   --------->ZAT14<<<<<<<<<TBF1   <----   agatagagataaatccggttctagaatcccggtttaaccgccataccggtggaagattctgctttactacgctctccgcttcttcttctcctcgattcga  8806400                                                                                                   <-                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                             --------                                                                                         <------MYB46(1)                                                                                        --------->MYB59                                                                                    <---------ANAC58                                                                              --------->ATHB12<------MYB83                                                                              --------->ATHB51<------MYB46(1)                                                                             <---------YAB1  <-------                                                                             --------->ICU4  <-------                          <---------TOE2(3)                                --------->YAB1<------MYB83                 <---------YAB1                                        <------MYB46(1) <---------MYB55(1)               --------->YAB1                                          <------MYB83 <---------ANAC58<   ------>ZmHOX2a(1)------->TEIL                                      --------->ALFIN1<---------MYB52(1) -----GLK1(2) <---------YAB1                        <---------YAB1   <--------P     <---------ANAC46<   ttctcctcatgggtttatcatgaatttttaggtgagaatttcgatttttgtaatttgatagtcttctctaggttggagcataattggcgttaggtttggt  8806500      >>>>>>>>>GATA-4      --------->ARR14(2)      <---------ARR14(2)      >>>>>>>>>GATA-1      >>>>>>>>>GATA-2      >>>>>>>>>GATA-3 <------MYB46(1) <------MYB83 --------WOX13(1) ------MYB46(3) ----->ATHB12                                          <---------GLK1(2) -----YAB1                 --------->YAB1  <----------DOF2 ->MYB46(2)   <<<<<<<<<<<<<<<<<LFY        <---------ANAC58                           --------->ALFIN1 --AtMYB61    >>>>>>>>>>>>>>>>>LFY   --------->At4g35610                           <---------ANAC58 --MYB46(3)<XXXXXXXXXXXXXXXXXXXXMIR841B   <---------ANAC58    <----------DOF2      <---------ANAC46 ---------MYB46(3)        <---------YAB1------>NtERF2<---------ATHB12     --------->TOE2(3)     <---- ---------AtMYB61 <---------MYB52(1) <---------At4g35610      <---------DAG2       <---------ANAC58   gattggtggattcagtttccattggtttttgataatttgtgctggcttttggccattgattctgctttttcagttttcttaatttgtgtgtggattattt  8806600                         --------->ANAC58                         --------->ANAC58                         --------->ANAC46                    --------->ZAT14                    <---------At4g35610                 ------>ZmHOX2a(1)                    --------->YAB1    <---------TOE2(2)   ----------->HVH21--------->At4g35610         <-----------GT1         <---------TOE2(3) -------GT1  <-----------GT1              <------ZmHOX2a(1)------->TEIL <---------TOE1(2) <---------GLK1(2)   gctatctgacagtattatcctctgctctcgcaatttggacttgaggaattttacattgatgaatttgattttcttaggttttgagtaattcagaaactcg  8806700                     <---------YAB1                   --------->YAB1                  <---------YAB1                  --------->ICU4               <---------YAB1               --------->ICU4             --------->YAB1            <---------ATHB12                                <---------YAB1                         <-            --------->ICU4                                --------->YAB1                         ----        --------->LBD16                                  --------->ICU4                         -----       --------->HSFB2a(2)                               <---------YAB1                         <----      ------>ZmHOX2a(2)                                --------->YAB1                         -------    --------->ARR11(3)                                --------->ICU4                         --------  <---------YAB1--------->YAB1--------->GLK1(2)  <---------MYB52(1)  --------->GLK1(2)  <---------MYB52(1)   agtgatgatcccgaatgatgatgatgatgcaaattctatgaagaattatccgttaaatgatgatgatgcaaattctatgaagaattatccgttaaatgat  8806800  Previous    Next  AGI:  At2g20400.1    Description:  myb family transcription factor. similar to PHR1 (PHOSPHATE STARVATION RESPONSE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT4G28610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40570.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 8806268    to: 8809054    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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