Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->CCA1(2)                                  <---------ARR11(3)                                --------->ANAC58                                --------->ANAC58                            ------>MYB46(1)                            ------>MYB83                         --------->ZAT2                         ----------->RAV1(2)                         --------->At4g35610                         <---------At4g35610                       --------->ANAC46                       <---------ALFIN1                     <---------ALFIN1                              --------->AHL20(2)                    ------>ZmHOX2a(2)                             --------->AHL20(2)                   <------ZmHOX2a(2)                  --------->ANAC46                     --------->MYB46(3)                  <---------ARR14(2)                 ------->GAMYB<---------ATHB12 ---------->DOF2                  --------->ARR14(2)<-------TEIL    <---------ALFIN1   --------->YAB1   --------->ZAT18   ctcacagagtatagactttggatccacacctgccaagatacatcaccaaaaacaacacaccgtattcaataaataataccgaaaccaaagtgaacaaacc  8749000                                       <----------DOF2                                    <---------ARR11(3)                               ------>MYB46(1)                               ------>MYB83 <---------At4g35610                               --------->MYB52(1)           --------->TOE2(3)                <-------                               -------->P   --------->At4g35610   --------->MYB46(3)         <-------                       <-------TEIL<------ZmHOX2a(1)      -------->P              ------>ZmHOX2a(1)   agagaaacagtatcaacattcaacatacatacctacaggaactttgggctgactaatagctaccttgaacaactcattcaattcctgttctctcgctttc  8749100                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                           --------->ANAC46                                                    <---------CCA1(2)                 --------->GLK1(2)     <----------DOF2                          <---------ARR11(3)                      <---------ARR11(3)   ------>ZmHOX2a(1)                 <---------ANAC58                                 --------->ARR11(3) --DAG2             ------>ZmHOX2a(1)<---------ANAC58      --------->ZAT6             <-----------ARR10 ---DOF2 <----------DOF2   <-----------GT1    --------->ARR11(3)                     --------->RVE1(1)   tcttcctctttctttttctgtcctcaaaaaaaccatttttcttggtaagaacttatctctcacactaactcattagacatattcaaaaaatctactccac  8749200                                                            --------->ZAT2                                                            <---------ZAT2                                                            --------->At4g35610                                                        --------->TOE2(3)                                                        --------->TOE1(3)                                                      ------->TEIL                                                     <---------CCA1(2)                                                   --------->ALFIN1                                                 --------->TGA1a                                                 <---------ANAC55(1)                                                 <---------ANAC46                                                 --------->O2                                                 <---------ANAC55(2)                                                 <---------O2          --------->MYB52(2)                                                 <---------TGA1a    <----------DOF2     ------>ZmHOX2a(1)                           ==============================bZIP_DOF ->ZAT14                                         <---------ANAC58 <---------At4g35610 ->ZAT18                                         <---------ANAC58 --------->At4g35610 --ZAT18                               --------->At4g35610  <---------At4g35610                   <-- --ZAT14        <-------TEIL           <---------At4g35610 --------->MYB52(2)         <---------TOE2(3)   tagcctcctaacttcaaattcatgaagaaaactcaaaactcatctcaagagacgtgtaccttagctgcagctttagttgcatcgggtttaggctgaacag  8749300        --------->GLK1(2) <---------ANAC58                                                                     <----------DOF2 <---------ANAC46                                         --------->LBD16           <---------At4g35610 <---------ANAC58           --------->KAN4(2)        --------->WOX13(1)           xxxxxxxxxxxxxxxx>smallRNA(i) -------WOX13(1)           <---------KAN4(1)      <-----------GT1        <---------ALFIN1  --------->ANAC46   attgcttgagactctgaacatacttctgaacattcttgctcttgttcttgtttttcaatccgaaagttttgtcttccacttgtttctgcttcttcgccaa  8749400                --------------------->WRI1                <----------DOF2                                                           ------>ZmHOX2a(2)               <---------ANAC58                                                         <---------ARR14(2)               <---------ANAC58                                                      --------->ANAC55(1)               <---------ANAC46                                                      --------->ANAC55(2)           <-------GAMYB                                                             --------->ANAC46          --------->MYB111(2)                                                        --------->ANAC58          --------->MYB111(1)                                                       <---------LBD16--          <---------MYB46(3)                                                  <---------------AtSPL8          --------->MYB55(2)                                                 <------------CBF      <-          --------->MYB52(2)               <---------ATHB12                <---------AHL20(2)      <-        <---------ANAC58               <-------TEIL             --------->ANAC58  <---------REM1(2)<-        <-------GAMYB                  ------------>CBF         --------->ANAC46  --------->ZAT14  <-        <---------ANAC58             <-------MYC3    <------ZmHOX2a(1)     <---------YAB1<------ZmHOX2a(2)       <---------MYB46(3)            <-------MYC2   ----------->GT1     ----------------------->TaNAC69(2)      <---------AtMYB61              ------->MYC2  <---------TOE2(3)   <---------DAG2--------->ANAC58     <---------MYB52(1)   --------->At4g35610  <----------DOF2  --------->ANAC58  <---------ZAT14  --    <----------DOF2    <------NtERF2 ------->MYC3  <---------TOE1(3)   <----------DOF2  --------->ARR14(2)   atcagcctttggttgttgctttggaggcatcttcaaacacgttcaatcgatttaaggaaaaaaaaaacgcaaacttttttattgtacacggatccgatgg  8749500                                                                                           --------->GLK1(2)       ---------->DOF2                     <---------YAB1                                 <---------GLK1(1) ------->HSFB2a(1)                      --------->GLK1(2)                --------->At5g28300 --------HSFC1(2)           <---------TOE1(3)                           ----------->GT1--------->LBD16 -----MYB83                 <---------TOE2(3)                          ------>ZmHOX2a(2)  --------->GLK1(1) --------HSFB2a(1)  --------->YAB1   <---------TOE1(2)      <---------MYB59           <---------HSFB2a(2) -----MYB46(1)<---------TOE2(3)      <---------TOE1(3)      --------->TOE2(3)         --------->HSFB2a(2) ------->HSFC1(2) ------->TEIL       <---------TOE2(3)      --------->TOE1(3)  --------->AHL20(2)<---   aaggttctctaaagctaatgtatcaaaattagggtttctaaggttctgagtgaaaacgaaaacctaaatttgatcggtaaaaaaaatcccagaaatctgt  8749600                     ----------->GT1                            <---------At5g28300                --------->At4g35610                            <-----------GT1              <------NtERF2                            ----------->GT1                    <----------ID1            <---------DEAR3(1)                       <---------ATHB12            ---------->DOF2            <---------ANAC46                         --------->ICU4           <------ZmHOX2a(1)     <           <---------LBD16<---------ARR14(2)    --------------->AGL15      --------->CCA1(2)  -------       --------->MYB52(1) --------->ARR14(2)    <---------------AGL15================HOX2a_HOX2a<---- ---------CBF--------->LBD16                   ----------------->AGL1<------ZmHOX2a(2)--------->CCA1(2)   attgaagcaaaacggcggagatgaagaaaatttgcccagaaacagagagaccctaatgagtaaaattaccgatcgagataggagaaagagatgagacaaa  8749700                                        <---------ANAC55(2)                                        --------->ANAC55(2)          <---------ANAC58              --------->ANAC46                        <---------YAB1          <---------AtLEC2              --------->ANAC58                 --------->TOE2(3)  ----------->RAV1(1)          --------->ZAT14                        <---------ALFIN1         <----- --------->REM1(1)             <---------ZAT14               <-----------RAV1(1)<---------AHL20(2) -------TEIL                   <---------REM1(2)    <----------DOF2<---------At4g35610   <---------MYB59 --->DOF2 <---------ANAC58   --------->ETT(2)--------->ZAT6 <---------YAB1      --------->AHL20(2) -----------AtSPL8 <-----------GT1      --------->ANAC58 <---------YAB1 --------->At4g35610   -------   ggtacaacatttgcctggtattagccatttgtctacactgatacgaaacactagcttttactattgttgggctcacctcaatataaatgggcctaaattt  8749800                                                                                ----------->GT1                                                                                <----------ID1                                                                               ----------->GT1    <--                                                                        --------------->AGL15     ---                                                                        <---------------AGL15  <-----                                                                       ----------------->AGL2  ------                                                                       ==============================                                      <---------AHL20(2)               ----------------->AGL3 -------  <-----------------AGL1<---------ZAT18                                ----------------->AGL1 <------ ----AHL20(2)          <-----------HVH21       --------->ANAC46       ------>NtERF2       ------->TEIL -->AHL20(2)         --------->MYB59 --------->AHL20(2)   ----------->GT1    ---------->DOF2---------   atagtccatttaaggcccagttttaggtcactcatcttataaaatttccaaaccagaagaatgaaaaaatgctgccaaaaaaaggaaaaatgaatcataa  8749900  Previous    Next  AGI:  At2g20280.1    Description:  zinc finger (CCCH-type) family protein. similar to putative uncharacterized hypothalamus protein HT010 [Oryza sativa (japonica cultivar-group)] (GB:BAD73384.1); similar to Os01g0834700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001044722.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571) Range:  from: 8746992    to: 8749430    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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