Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <--------HAHB4                <---------ICU4                                          --------->AHL20(2)                --------->YAB1                                       ------>MYB46(1)                --------->ATHB12                                     ------>MYB83               <---------ATHB12                                    <---------MYB59    --------->AHL20(2)                                        -------->HAHB4                     ----    <---------AHL20(1)                                        <---------ICU4               --------->AHL20(2)    <---------AHL20(2)                                        --------->YAB1             --------->AHL20(2)    --------->AHL20(1)                                       <---------YAB1          --------->AHL20(2)   --------->AHL20(2) --------->YAB1      ------->TEIL     --------->YAB1          <----------DOF2 ------>GT1    --------->ICU4          <---------YAB1     <---------AHL20(2) <---------ICU4<---------AHL20(2) ----->GT1     <---------YAB1      <---------GLK1(2)     --------->AHL20(2)  --------->ARR14(2)  <---   ttaaattttatttagtaatcattagcataatcgaatagattatgaacatatttttgatatataataataccaaattcaatatttgctttaaatttatatt  8167400                    --------->AHL20(1)                    --------->AHL20(2)                    <---------AHL20(2)                   <---------AHL20(2)   --------->ATHB12                   --------->AHL20(2)   <---------ICU4          --------->ANAC58             <---------ATHB12                              <---------ICU4          --------->ANAC58    --------->ANAC46               <---------YAB1  <---------ICU4 ----->AHL20(2) --------->YAB1<-----------GT1 <---------MYB52(1)        --------->AHL20(2) ------AHL20(2) --------->AHL20(2)   --------->WOX13(1) <---------ICU4  <---------AHL20(2)         --   tatattttggaatcgcaataaaaaaattgtttacacaatccatcattcgttattttcaaaattattctacttattttattcatttcaaaattattcgaat  8167500                                                                               --------->AHL20(2)                                                               <---------AHL20(2)                                                               --------->AHL20(2)     <---------AHL20(2)          <---------YAB1   <---------AHL20(2)                 <---------AHL20(2)   <---------ICU4       ------->TEIL       <---------AHL20(1)               <---------AHL20(2)  <---------AHL20(2)   <---------TOE2(3)      <---------AHL20(2)              <---------YAB1   <---------DAG2          <-  --------->YAB1          --------->AHL20(2)             --------->AHL20(2)<----------DOF2      <---- ------->TOE2(3)    <-----------GT1              <---------AHL20(2)<---------AHL20(2)<---------YAB1--   acattaatgaacatcattcatttttcaatttttttttgttattcaacttatttattcatttttatttatttattcaactttttaatttttattttgttgt  8167600                                                                   --------->ALFIN1                                                                   <---------ANAC46                                                                  --------->ALFIN1                                                                  --------->ATERF1(1)                                                                 --------->ATERF1(1)                                                                 --------->ALFIN1                                                                --------->ATERF1(1)                                                               --------->ALFIN1                                                              --------->ALFIN1                                                              --------->ATERF1(1)                                                             --------->ALFIN1                                                             --------->ATERF1(1)                                                            --------->ALFIN1                                                            <xxxxxxxxxxxxxxxxsmallRNA(s)                                                            --------->ATERF1(1)                                                           --------->ALFIN1                                                          <---------ANAC46                                                         <---------ANAC46                                                        <---------MYB46(3)                                                        <------MYB83                                                        <------MYB46(1)                                                       <---------MYB46(3)                                                       --------->MYB55(2)                                                       --------->ALFIN1             ------->MYC2                             <--------P--------->ALFIN1             ------->MYC3                             --------->ALFIN1             <-------MYC2      --------->YAB1        <---------MYB52(1)                        <-----             <-------MYC3   <---------CCA1(2)        <-----------HVH21                         ------ --------At4g35610      ----------->GT1           ----------------->AGL1             --------->ATHB12 -----MYB52(1)          <---------ANAC46         <---------At5g28300         --------->At4g35610----- ------->At4g35610   <---------CCA1(2)          <-----------GT1--------->ATERF1(1)  <---------YAB1   tagcttccatttgcatatgcttcgtatcgtatatcatcacttccagttttttaccggttggggggggggggggggaagaagcagagatgattcgtcaaca  8167700                           --------->LBD16                         <---------LBD16                       ------>MYB83                       --------->MYB52(1)           --------->AHL20(2)           <---------AHL20(2)          --------->AHL20(1)          --------->AHL20(2)                                        <------------CBF          <---------AHL20(1)                                  --------->GLK1(2)        ------->TEIL   ------>MYB46(1)                   --------->LBD16                         <--- ----MYB52(2)        <---------MYB59                    --------->LBD16                     <-------- --->MYB46(3)        --------->AtMYB61                 <---------LBD16                      <-------- -->GAMYB <---------AHL20(2)     ------->TEIL         <---------LBD16                 <<<<<<<<<TBF1   aacaaaaacgaatttattttgaaccaaaccggatgtatattttaaaccgaaatcaaaccgggaaaacctgtattgacgagccctcttcttcttcagctag  8167800                    <---------ANAC58                    <---------ANAC58                <---------ANAC46                      --------->At4g35610                <---------ANAC58                      <---------At4g35610          <---------ALFIN1                            <---------ZAT2   --------->At4g35610                         <----------DOF2                            <----------DOF2 ------ZAT6     <---------ANAC58               <---------DAG2                        <----------DOF2 -ZAT2------>NtERF2<---------ZAT2          ---------->ID1                           <---------ANAC58 -At4g35610     *TSS<---------ANAC46      <-----------GT1           --------->YAB1  <---------ANAC58   tgagaggctgcctcacttgcttgctggtttgatactgccaagtttttcgctttctcagctcttccttcgatggtaatcttcaaattcctttcctttagac  8167900                                                                                        <------MYB83                                                                                        <------MYB46(1)                                                                                       <---------DEAR3(1)                                                                                       <---------AtMYB61                                                                                       --------->MYB55(2)                                                                                       --------->ALFIN1                                                                                       --------->MYB46(2)                                                                                   <---------TOE2(3)               <----------DOF2                        <---------ANAC58             <---------TOE1(3)<              <---------ANAC58                        <---------ANAC58            <XXXXXXXXXXXXXXXXXX              <---------ANAC58                    <---------SPL7         <---------MYB46(3)  <-------        <---------YAB1                           <---------ANAC58      <---------ANAC46--------->MYB111(2)       --------->TOE2(3)                         <---------ANAC58      <---------ANAC58<---------MYB46(3)       --------->YAB1                         <-----------RAV1(1) <-----------RAV1(1) <--------P    -  <---------YAB1                   <---------ANAC46   <---------ANAC46 <---------ANAC58--------->MYB111(1)   ccttattaatcttattgcttttgtaatagacttggtttagtgtgttttttgtcgtagcgagtttaatcttgttgctggttattgtaaggttggtgctttg  8168000                                       ---------->DOF2                                     <---------HSFB2a(2)                                 --------->HSFB2a(1)                                 <---------HSFB2a(1)     <-----------HVH21         <---------ARR11(3)      <-----------GT1 <-------TEIL         <-------- ---------ARR11(3)         --------->REM1(2)    ------>ZmHOX2a(2)   ----------->GT1       <---------At4g35610 XMIR3434*              <---------ANAC46  --------->YAB1         ---------->DOF2------>ZmHOX2a(1) ---DOF2       ----------->GT1 --------->ARR11(3)  <----------DOF2 --------->DAG2<---------ICU4 -------->ARR11(3)  <----------DOF2  --------->HSFB2a(2) <-----------GT1       <---------MYB59     <-   aatatcatgtcagagactggtgatttatgtgtagaacttcccaaagatgatcccttttatcaccacaaaaaggttcaatttcctaatttctctgctcttc  8168100                                                                                     <---------ZAT14                         <----------DOF2                        <-------MYC3     <---------ICU4               --------->ANAC58                        <---------GLK1(2)        --------->AHL20(1)               --------->ANAC46                        --------->ARR11(3)       <---------AHL20(1)               --------->ANAC58                    <------ZmHOX2a(2)            --------->AHL20(2)   --------->TOE2(3)     <---------DAG2           --------->ARR11(3)            <---------AHL20(2) --DOF2      ---------->DOF2     <-----------GT1  <---------ARR11(3) ---------->DOF2<-----------GT1 --------MYB52(1)   <---------MYB52(1)        ---------->DOF2   ------->MYC3 --------->AHL20(2)   tgttatctcaatactcaaagccattagctttttttttgccttatagtctaaagatcagatttttcatgtgccaaagtcttaaaatattacactgtttagt  8168200                                                                                          <---------TOE2(3)                                                                                         --------->DAG2                                                                                        ---------->DOF2                                 ------->TEIL                               <---------TOE2(3)                         --------->YAB1     --------->ARR11(3)--------->ARR11(3)     <---------ANAC58    <---------TOE1(2)   <---------YAB1    <---------YAB1      <---------ARR11(3)     <---------ANAC58   ttttctcatgttttgtttgagtttttatgaaaatgaattttcttatgattttgtgtctgtagaagttcttgagttgcaaaggtttatgcgtaaaggaaac  8168300  Previous    Next  AGI:  At2g18850.1    Description:  similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43237.1); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 8167816    to: 8170771    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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