Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->bZIP60(1)                                                    ------>NtERF2      <---------O2                                        <---------MYB52(1)--------->bZIP60(1)      <---------bZIP60(1)                           <---------At4g35610     <---------bZIP60(1)   ----------->TGA1                                 <---------GLK1(1)       <---------TGA2(1)   ----------->HVH21            --------->MYB46(3)  --------->ZAT2          --------->TGA2(1) ---------DEAR3(1)            <-----------GT1       <---------ZAT2          --------->ANAC58 ------DEAR3(1)            --------->YAB1      <---------ANAC58             --------->ANAC58 ------->HVH21             <---------ICU4      <---------ANAC58             --------->ANAC46       -- ----->DEAR3(1)           <---------YAB1     <---------ARR11(3) <---------At4g35610               --- ----->ETT(2)             --------->ICU4     --------->ARR11(3) --------->At4g35610              ---- -->MYB52(2)         ----------->GT1 <-----------HVH21   --------->LBD16  <---------TGA2(2)   ------- ->SPL7            <---------ANAC46 --------->DEAR3(1) <---------LBD16   ----------->HVH21    ------- -MYB52(1)      ----------->HVH21<---------ALFIN1   --------->At4g35610  ----------->TGA1 <----------   cgacggtgacgacggagtccgacgggttattattaccaccgtcggaagagcttgagctccggtatgtgctgctagatgacgccattgatttttaacaaga  7905900                                                                           --------->AHL20(2)                                                                           --------->AHL20(1)                                                                           <---------AHL20(2)                                                                          --------->AHL20(2)                                                                       --------->AHL20(2) --------->GT1                                                         <---------AHL20(2) ------>DAG2                                                 ------>ZmHOX2a(2) ------>DOF2         <------ZmHOX2a(1)                     --------->ARR11(3) -->ANAC58          <----------ID1           <------MYB83  <---------ARR11(3) -->ANAC58       ---------->DOF2             <------MYB46(1)--------->At4g35610 -GT1    <----------ID1                 <---------YAB1   <---------YAB1--------->ICU4   aaagttacaagaagacaaaaaaaggacagagttttatgttttatgtttggtttttttttatgatctgtctgaaaaaattaattagagtttgtagcaattc  7906000                                                                                 <---------MYB52(1)                                                                                <-----------HVH21                                                                              -------->ZAP1                                                                           --------->WRKY38(1)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                      ----------->ARR10            <-                                                                    <---------At4g35610            --                                      --------->ATHB12          <------NtERF2<---------At5g28300  <--                            --------->MYB52(1)             --------->ANAC46--------->WRKY12       ---      ----------->GT1 <------ZmHOX2a(1)                   <---------LBD16  ----------->HVH21     <---   atgaaacgttgtaaaaccagtagaggaagacgacggagaaagattgaacgagatgggttctacggcagagagcagatttgaccgtgagcccagagagcag  7906100                                                                                    --------->ARR11(3)                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               <-----------HVH21         --------->MYB52(1)                                                   --------->bZIP60(1) --------GLK1(1)                     ---------->DOF2                          --------->TGA2(1) ------->GLK1(1)                --------->YAB1                                <---------TGA2(1) -------ARR14(2)               <---------ATHB12                               <---------bZIP60(1) ------>ARR14(2)               <------ZmHOX2a(2)                           <---------YAB1 ---ZmHOX2a(1)           --------->ARR14(2)       <---------AHL20(2)    <---------AHL20(2)      -----   gatttcgcagagaacgggagtcatcagtttccgatcatcaaaagactcaaatttttatgttttctcggtctgaatttatgatgtcagaacttgaaaacaa  7906200                                                                                              -------                                                                                        <------ZmHOX2a(1)                                                                                      <---------TOE2(3)                                                                                      <---------TOE1(3)                                                                                <---------RVE1(1)                                                                               <---------GLK1(2)<----                                                                               --------->ARR11(3)                                                              ---------->DOF2  <---------ARR11(3)   <------ZmHOX2a(1)                            --------->GLK1(1)       --------->At4g35610   <------ xxx>smallRNA(le3)                              --------->At4g35610     <---------At4g35610   ------- ---->MYB52(1)             --------->ATHB12   <------ZmHOX2a(1)        ----------->RAV1(1)  ---------   acagaggaagagtttttttttttttttggttattggagaagaaacagaggagctctaaatataaaaaagaaaacagcagaagatttttaaggagataagg  7906300                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               <----- -->ANAC58                                                      ------>MYB46(1)                ------ --ZmHOX2a(1)                                      --------->AHL20(2)  --------->ANAC58    <---------AHL20(2) ---TOE2(3)                                   <---------TOE2(3) ------>MYB83 <---------ALFIN1  <----- -->ANAC58                      <---------REM1(1)  <-----------TBP     --------->ANAC58    --------->AHL20(2) >CCA1(2)         ---------->DOF2      --------->ALFIN1         <---------CCA1(2)      <----------DOF2   aagagaagatgagtgaatgggaaagaggtttttgatgaagggtgtgttatggattatatagaaaccaaatctcaagcatccacttgtgtctttttaattt  7906400                                  --------->At4g35610                                              <-                            <------NtERF2                                                         <--                           <---------MYB46(3)                 <-----------GT1                     ---                          --------->ALFIN1          <------NtERF2                                 <--    <---------------AGL15 <---------ANAC46         ------>NtERF2       <---------AHL20(2)        ---- <---------YAB1         <------MYB46(1)           --------->ANAC46    <---------YAB1            <---- ---->AHL20(2)          <------MYB83            <---------ANAC58     --------->AHL20(2)       ------- -----AHL20(2)          <---------MYB46(3)   <---------ARR14(2)    --------->ICU4         -------->HAHB4 --->AHL20(2)          <---------AtMYB61     --------->ARR14(2)    <---------YAB1         --------->ATHB12 ----AHL20(1)    --------->MYB52(1)         --------->DOF5.7(2)<-----------GT1           <---------YAB1 --->AHL20(1)   --------->ICU4 ---------->DOF2  --------->ANAC46 --------->YAB1          --------->ICU4 ----AHL20(2)   <---------ATHB51  <---------ZAT2<---------ANAC58<---------YAB1<-----------GT1<-------TEIL   attttgattttttgggaaataatggatggtggggaaagctggaatcgtttacgcgcccattgttttatcatttttattttttactaacaaaatgattcat  7906500         --------->AHL20(2)                <---------DAG2         <---------AHL20(2)               <---------ANAC58       <---------YAB1             <---------MYB46(3)    --------->AHL20(1)           --------->ALFIN1    <---------AHL20(2)         <------MYB46(1)      <---------AHL20(2)          <---------WOX13(1)    --------->AHL20(2)        --------->MYB111(2) --------------->AGL15        >>>>>>>>>ARR2   <---------AHL20(2)         --------->MYB46(2)  <---------------AGL15       --------->ATHB12   --------->AHL20(2)         --------->MYB111(1)<-----------------AG        <---------YAB1 --------YAB1                 <---------MYB46(3) ==================================================== -------AHL20(1)              --------->MYB55(2)<---------AHL20(2)       <---------DAG2 ------>AHL20(2)       <------MYB46(1)    <---------ANAC46               <----------DOF2 -------AHL20(2)       <------MYB83       <---------ANAC58            <-----------GT1 ----->YAB1           --------->MYB59<-----------RAV1(1)             --------->ZAT14 -----YAB1   --------->AHL20(2)<------MYB83<----------DOF2          <----------DOF2 -->YAB1--------->AHL20(2)   <---------MYB55(1)<---------AHL20(2)   <---------DAG2                ---   tataattttattaaaaaaaatatgtaggtcagtaggtggatgttgcttttttatttttttggtaatgacactttactttttgattgtttttttggtattc  7906600                                                                                              <------                                                                                             --------                                                                                        ---------->DOF2                                                                                     --------->At5g28300                                                                                 <------MYB83--------                                                                                 <------MYB46(1)                <--------P                 <---------ANAC46                     <---------AtMYB61         <---------YAB1                    <---------ANAC58                     --------->MYB111(1)         <---------AHL20(2)                <---------ANAC58                     --------->MYB111(2)        --------->TOE2(3)          <----------DOF2                              --------->MYB46(2)       <---------------AGL15     ----------->GT1                                --------->MYB55(2)      --------->AHL20(1)      <---------ANAC46                                  <---------MYB46(3)      <---------AHL20(1)      <-----------RAV1(1)    --------->YAB1             --------->MYB59   >>>>>>>>>>GT-3b            <---------ANAC58     <---------TOE2(3)           <---------MYB55(1)   < ======================MADS_MADS<---------AtMYB61 --------->YAB1               <--------P    -------- ------->DOF2 --------->YAB1  <---------ANAC58  <---------YAB1   <------ZmHOX2a(1)  ----------->GT1 -   aaaagaaaaatattaatggtaagtatagatttgtgtggtttaatggtgtgattaatgatatgtagtaggatagacaaataggtaggtggtaaaagttgac  7906700                                                        <---------AtLEC2      <---------YAB1                                    <---------ANAC58      --------->ICU4                                    <---------ANAC46 --------->GLK1(1)                                      <---------ANAC58 ---WRKY18(1)                                  ----------->GT1                                     <- ->WRKY12        ----------->GT1             <---------ANAC46                                  <----- ->WRKY38(1) ---------->DOF2                 <---------ANAC58                       --------->GLK1(2) ---------ARR11(3)                           <---------ANAC58                       --------->ARR11(3) ->WRKY45 --------->AHL20(2)               <---------ARR11(3)                       <---------ARR11(3) -------->ARR14(2)                         --------->ARR11(3)           <------ZmHOX2a(1) --------->YAB1   cagatatcaagattaaaaagagtgaaaactattgaaaatagtcaatgtcttgaaaattgcatgtagtcaatgtaggaattacagaaaatctttgataatt  7906800  Previous    Next  AGI:  At2g18160.1    Description:  ATBZIP2/GBF5 (G-BOX BINDING FACTOR 5); DNA binding / protein heterodimerization/ transcription factor. similar to ATBZIP44 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 44), DNA binding / protein heterodimerization/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G75390.1); similar to bZIP transcription factor bZIP124 [Glycine max] (GB:ABI34666.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 7905094    to: 7906324    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g18162.1    Description:  CPuORF1 (Conserved peptide upstream open reading frame 1). similar to CPuORF5 (Conserved peptide upstream open reading frame 5) [Arabidopsis thaliana] (TAIR:AT1G75388.1) Range:  from: 7905094    to: 7906324    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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