Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->ANAC58                                               --------->TOE2(3)                                               <---------MYB59                                               --------->TOE1(3)                                        --------->AHL20(1)                                        <---------AHL20(2)                                        <---------AHL20(1)                        --------->CCA1(2)     <---------ANAC55(2)        <---------AHL20(1)                       --------->ARR11(3)   <-----------GT1              --------->AHL20(1)                  --------->TOE2(3)     --------->AHL20(2)          --------->AHL20(2)                  --------->TOE1(3)    --------->AHL20(2)          <---------ATHB12                 -               <-----------GT1      --------->YAB1   --------->ANAC58    --------->ARR11(3)         -         --------->TOE2(3)         <---------YAB1---------->DOF2 --------->WOX13(1)                <-   tcaatagcaaaacttaatcaccttagatatataagttttcattatattacctaaaacgcacagagttcaatcaaatattttgacttcaaaatttgtatgt  5443700                                                                    ----------->GT1            --------->YAB1                                         <---------TOE2(3) <---------AHL20(2)                                           <---------AHL20(2) <---------AHL20(1)                             --------->YAB1--------->AHL20(2) --------->AHL20(1)                       <------ZmHOX2a(1)  --------->AHL20(2) -------->YAB1                   <---------GLK1(1)  <---------AHL20(2) -------->AHL20(2)  <-------TEIL --------->GLK1(1) --------->AHL20(2)<------ZmHOX2a(1)    <---------- --------YAB1      --------->CCA1(2)     ----------->GT1  <---------YAB1      --------->TOE1(2)    --   tattatattgacaaaaataagattcaaacttatggatttcataaggaaaatcataaaattctaataaatgaggataaaaacatgagacttatttgttgtt  5443800                                               --------->AtLEC2                                          <-----------GT1                                     ----------->TBP                                     <---------AHL20(2)                                     --------->AHL20(2)        --------->YAB1                       <                                   --------->AHL20(2)       --------->GLK1(1)                      <-                                   <---------AHL20(2)    ------->GAMYB                             --       --------->AHL20(2)        <---------AHL20(2)   --------->MYB52(1)                 <-----------GT1 -RAV1(1)  ---------->DOF2       --------->AHL20(2)--------->ANAC46               ----------->GT1 <-- ---->ZmHOX2a(1)      --------->AtLEC2 ----------->TBP----------->RAV1(1) --------->GLK1(2)      <---   cctaaacaatataaaaagagggtaatgcaaactatatatatatatatccatccaaacaacagaaatcatatttcagtttctgagaggtttttttcaactc  5443900                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                  <--         ------------>CBF                                                                  <---------YAB1    <---------ANAC58                                                                      --------->AHL20(1)    <---------ANAC58                                                                      --------->ARR11(3) ------------CBF                                                                          <---------ARR11(3) --------ICU4                                                           <-----------GT1   <---------AHL20(1) ------->ATHB12                 ---------->ID1             --------->GLK1(2)             --------->CCA1(1) -------YAB1        <------------CBF      ------------>CBF<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   ----- -------DOF2     ------------>CBF     <---------CCA1(2) ----------->ARR10 <---------YAB1 --------->RVE1(1)   tttattgcttactcaatgtttcaattgtgtttttgttctcatttctcaataaactgatgagaacctcgttgttgtcacgattcaaaacaaaatatctttg  5444000      <------------CBF    <---------YAB1   --------->AHL20(2)   <---------AHL20(1)   <---------AHL20(2)  --------->YAB1 <---------YAB1                                                              <---------ANAC58 --------ICU4                             <---------AtLEC2                   <---------ANAC58 -------HAHB4                        <-----------GT1                         <---------ANAC46 ------->YAB1    <-----------GT1  <---------AHL20(2)                    <---------ICU4 -------YAB1--------->MYB52(2)   --------->AHL20(2)                     --------->YAB1          <---- ---->YAB1<---------MYB52(1)     <---------AHL20(2)             --------->ANAC46        <---------YAB1   atcattataattgttagtttttccatatttctaaatttttttctgcatgtaagaaaaatgagttatacgtagaaacatgacttgttttttatgatgcaga  5444100                                                                           <xxxxxxxxxxxxxxxxsmallRNA(s)                                              ----------->RAV1(1)         <---------ETT(2)                                            --------->DEAR3(2)      <---------ALFIN1                                           ========================HOX2a_HOX2a                                           <------ZmHOX2a(2)       --------->MYB46(3)                                          ------->TEIL     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            ======================HOX2a_HOX2a    ------>NtERF2                            ------>ZmHOX2a(1)<---------ETT(1)   --------->LBD16           <---------ANAC58 =======================HOX2a_HOX2a  <---------ETT(1)           <---------ANAC58--------->TOE2(3)=======================HOX2a_HOX2a       <------------CBF    --------->TOE1(3)------>ZmHOX2a(2)  --------->HSFB2a(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    --------->ARR14(2)   <---------HSFB2a(2)              <xxxx <-----------GT1     ------------>CBF     <---------ARR14(2)------>ZmHOX2a(1)          <-----------HVH21 -----ARR14(2) ---------->ID1       --------->ATHB12    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <xxxxx   tttatactcgattgtttgtcttcttcaatccttaaaaatgaatggatccgacaatagcactccttcccgaccacggtcgataactcagccttcacttgcc  5444200              --------------------->WRI1                                               ----------->ARR10            <------NtERF2                                                            <---------ZAT14           ------>NtERF2               --------->ANAC46                            <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------ANAC58           <-----------HVH21               ------->TEIL      <---------ANAC46     <---------ANAC58  ------>ZmHOX2a(1)                   --------->YAB1       --------->REM1(2) xxxxxxxxxxxxxxxxxsmallRNA(si3)<---------ETT(2)       <---------YAB1         <---------ANAC46       < xxxxxxxxxxxxxxxxxxsmallRNA(fl3)<-----------TGA1--------->AHL20(2)      <---------At4g35610      ----   ttctcttccttgcccccattgagtccttctccgtcgtcatcccgtcgcaattcaataccattgatgaacccgtctgcttctgtggagagtagagactctt  5444300                               <----------DOF2                            ------>NtERF2                          <---------ANAC58                          <---------ANAC58                   --------->ANAC58                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->ANAC58                <---------ARR11(3)                    --------->MYB46(3)                --------->ARR11(3)                --------->ZAT18               <---------GLK1(1)                  <---------ZAT18               --------->GLK1(1)        --------->REM1(2)    <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------ZAT6   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)    --------->ANAC46                   <----   <---------TOE2(3) <---------ICU4<---------ANAC58  --------->ANAC58 ------->TEIL         <------ZmHOX2a(1)   <---------TOE1(3) --------->ATHB12   <---------ZAT14 ---------->DOF2                 <-----------RAV1(2) ---------MYB52(1)  <---------YAB1 <---------ANAC46  <xxxxxxxxxxxxxxxxsmallRNA(s)      --------->ZAT14 ------------->AGL1<----------DOF2 <---------ANAC58  --------->ANAC58<-----------GT1   <---------ZAT14   ccattagggttaagaagaaatctttattgcctcctttgtgtgtgaagagaagagcacccaaagacgacattgaacctttcaagagacactacaggagtct  5444400                                                                     <---------MYB46(3)                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                                                          ------>ZmHOX2a(1)                                                          =================HOX2a_HOX2a                                                      --------->ARR14(2)                                                      <---------ARR14(2)<---------MYB46(3)      <----                                                  <---------TOE2(3) ------>ZmHOX2a(2)           -----                                                 <-----------GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                 <---------WOX13(1)          --------->LBD16      <---------ARR11(3)          -------                <---------ANAC58       ====================================HOX2a_HOX2a       <-------       --------->MYB52(2)              ------>ZmHOX2a(1)  ================HOX2a_HOX2a        <-------   <---------MYB46(3)                  ===================================HOX2a_HOX2a    <---------ANAC58 ------DOF2     <---------ANAC58    ------>NtERF2--------->MYB52(1)<------ZmHOX2a(2)     <---------ANAC58   ttcagtggatagttgtttgagtgacttactaaaactgcctccttctccgaataacgtttcctcttcaagatcggttgatggagaacaaaatgcttccgag  5444500                                                                                       <------ZmHOX2a(1)                                                                                     <---------TOE2(3)                                                                                   ------>ZmHOX2a(1)                                                            --------->TOE2(3)    =============HOX2a_HOX2a                          --------->ICU4                <---------MYB59          ------>ZmHOX2a(2) -----ZAT2                <---------YAB1                <---------MYB111(1)     ==============HOX2a_HOX2a ---->ZAT2              --------->YAB1  <---------TOE2(3) ------>MYB83          <------ZmHOX2a(2) -->LBD16              --------->ICU4   <---------YAB1  <---------MYB46(2)     <---------ARR14(2) --ANAC58            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ------>MYB46(1)  <---------At4g35610     <- --ANAC58>>>>>>>>>>>>>>>>>LFY<---------YAB1    ---------->DOF2 ---------->DOF2 --------->ARR14(2)----   cttgagtttgataccagtgtttatactgatgatgaattgaataagatagcaaagagtaccaaacttaaagaggttgcatcggatcctaaggaagtcagaa  5444600  Previous    Next  AGI:  At2g13150.1    Description:  transcription factor. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT2G12900.1); similar to bZIP transcription factor bZIP28 [Glycine max] (GB:ABI34675.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 5444138    to: 5445541    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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