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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
---------->
DOF2
--------->
TOE1(3)
<---------
MYB59
<-----------
GT1
<---------
AHL20(1)
--------->
AHL20(1)
<---------
AHL20(2)
--------->
GLK1(1)
--------->
AHL20(2)
--------->
ANAC58
<-------
TEIL
-------->
YAB1
--------->
TOE2(3)
--------->
WRKY38(1)
--------->
CCA1(2)
---------
GT1
<---------
ANAC55(2)
--------->
ALFIN1
--------->
YAB1
tttcattatatatattacctaaaacgcacagagttccatcaaatgtgttgacttcaaaatttgtatgttattttgttgacaaaaataagattcaaactta
5324200
--------->
TOE2(2)
--------->
AHL20(2)
----------->
GT1
--------->
YAB1
----------->
GT1
<------
ZmHOX2a(1)
--------->
AHL20(2)
----------->
GT1
<---------
AHL20(2)
---------->
ID1
--------->
AtLEC2
<---------
TOE2(3)
--------->
AHL20(2)
<---------
MYB46(3)
<-------
TEIL
<---------
AHL20(2)
<---------
YAB1
--------->
TOE1(2)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
At5g28300
<-----------
RAV1(1)
---------->
DOF2
tggatttaataaggaaaatcataaaattctaataaatgagggtaaaaacatgggactcatttgttgttcttaaacaatataaaaagagattcatgcaaac
5324300
--------->
TOE2(3)
<---------
ANAC58
----------->
RAV1(1)
<---------
ICU4
--------->
ANAC46
--------->
ATHB12
--------->
AtLEC2
<----------
DOF2
--------->
ARR14(2)
<-----------
GT1
<-----------
GT1
<---------
ANAC58
<---------
ARR14(2)
--------->
YAB1
----------->
GT1
<---------
YAB1
<--
tatacatatccatccaaacaacataaatcatatttctgtttctgagaggttttttcaactctttattgcttactcaacgtttcaatttgtttttgttctc
5324400
<---------
YAB1
<---------
AHL20(2)
<---------
ICU4
--------->
YAB1
--------->
ARR11(3)
<---------
ARR11(3)
--------->
GLK1(1)
<---------
GLK1(1)
<---------
RVE1(1)
---------->
ID1
--------->
RVE1(1)
<-----------
GT1
--------->
CCA1(1)
<-----------
GT1
<---------
CCA1(1)
<---------
YAB1
<---------
ARR11(3)
<---------
YAB1
<-
--------->
ANAC58
<---------
AHL20(2)
<------
--------->
ANAC58
--------->
AHL20(2)
<--------
--------
DOF2
<-----------
GT1
--------->
ARR11(3)
<------------
CBF
<-----------
GT1
ctttctctataaactgatgacaacctcgttgttgtcacaattcaagacaagatatctttgatcattttaattgttatttttcccatttttctattttttc
5324500
<------
MYB83
<
<------
MYB46(1)
--
<---------
ANAC58
<---------
AtMYB61
--------
<---------
ANAC58
--------->
ANAC46
<--------
--------
AtLEC2
<---------
ANAC46
<-----------
GT1
<----------
DOF2
--
-----
GT1
--------->
YAB1
*
TSS
<-----------
RAV1(1)
<--------
-
AHL20(2)
<---------
ICU4
<---------
ARR14(2)
<---------
ATHB12
<-
tgcatgtaagaaaaatgagttatacatagaaacatgacttgttttatatgatgcag
atttatactccattgttggtcttcttcaatctttaaca
atgaat
5324600
<---------
ETT(1)
--------->
DEAR3(2)
------>
ZmHOX2a(2)
------>
NtERF2
------
ZmHOX2a(2)
<---------
ETT(1)
----->
TEIL
--------->
HSFB2a(2)
->
ATHB12
--------->
DEAR3(2)
-----
-
ATHB12
--------->
SPL7
--------------------->
WRI1
------->
ARR14(2)
<---------
SPL7
<------
NtERF2
<-----------
HVH21
-
YAB1
--------->
AtMYB61
<xxxxxxxxxxxxxxxx
smallRNA(s)
------>
ZmHOX2a(1)
<-----------
TGA1
--------
ARR14(2)
<-----------
HVH21
<-----------
HVH21
------>
NtERF2
<---------
ETT(2)
ggatccgacaataccactccgtcccgaccatggtcgataactcagccttcacttgccttctcctccttgcccccattgagcccttctccgtcgtcatccc
5324700
<---------
MYB52(1)
<----------
DOF2
<---------
WRKY12
------>
NtERF2
--------->
ARR14(2)
<---------
ANAC58
------->
TEIL
--------->
ATHB12
<---------
YAB1
<---------
MYB52(1)
<---------
ICU4
<--------
<---------
ICU4
<---------
ARR14(2)
----------->
ARR10
<---------
YAB1
<--------
--------->
AHL20(2)
<-----------
HVH21
<---------
ZAT14
<---------
TOE2(3)
<---------
ANAC58
--
---->
ANAC46
--------->
YAB1
<xxxxxxxxxxxxxxxx
smallRNA(i)
<----------
DOF2
<--------
gtcgcaattcattaccattgatgaatccgtcaacttctatggagagtagagactcttccatgaggtttaagaaaaactctttattgcctcctttgggtgt
5324800
--------->
CCA1(2)
--------->
ARR11(3)
<---------
ARR11(3)
--
--------->
AHL20(1)
--------->
ALFIN1
<---------
At4g35610
---------->
DOF2
<-----------
RAV1(2)
<-----------------------
TaNAC69(2)
-
ANAC58
--------->
MYB46(3)
<---------
ZAT14
<---------
WOX13(1)
<--
-
ANAC46
--------->
ANAC58
--------->
ZAT14
--------->
MYB52(2)
--------->
At4g35610
--------->
GT1
--------->
YAB1
---------->
DOF2
<------
ZmHOX2a(1)
<---------
ANAC58
<---
-
ANAC58
--------->
ANAC58
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
ANAC58
------>
ZmHOX2a(1)
gaagaaaatagcacccaaagatattggacccctaaagagacactacaggagtgtttcaatggatagttgtttgagtgacttactgaagctaactccttct
5324900
<---------
YAB1
--------->
ICU4
--------->
YAB1
--------->
ICU4
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
--------->
ANAC58
<---------
MYB46(3)
<---------
YAB1
--------->
ANAC58
<--------
P
--------->
ATHB12
--------->
ANAC46
<---------
WOX13(1)
<---------
ICU4
--------->
ZAT6
<------
MYB46(1)
<--------
ATHB1
<---------
ALFIN1
<------
MYB83
--------->
YAB1
------->
LBD16
<---------
MYB46(3)
--------->
ANAC46
--------->
ICU4
<------
-------
ANAC46
--------->
ATHB12
--------->
LBD16
<---------
ATHB12
<------
------
LBD16
<---------
YAB1
--------->
HSFB2a(2)
<---------
YAB1
<---------
YAB1
ccgggtaacactccatcttcaagattggttgatggagaccagaatgcttccaggctagagtttgatgccaatgattatactgatgatgaattgaataaga
5325000
<---------
DAG2
<---------
AHL20(2)
<---------
YAB1
<---------
ICU4
--------->
ICU4
<------
ZmHOX2a(1)
<---------
AHL20(2)
<---------
TOE2(3)
--------->
AHL20(2)
------>
ZmHOX2a(1)
--------->
AHL20(1)
<---------
MYB52(2)
------>
ZmHOX2a(2)
<---------
YAB1
--------->
MYB46(3)
=============
HOX2a_HOX2a
----------->
HVH21
---------->
ID1
----------->
GT1
==============
HOX2a_HOX2a
--------->
ALFIN1
--------------->
AtSPL8
---------->
DOF2
---------->
DOF2
<------
ZmHOX2a(2)
<-------
MYC3
-------->
ATHB1
---
YAB1
<------------
MYB.PH3(2)
<---------
ARR14(2)
<--------
P
------->
MYC3
--------->
YAB1
---
TOE2(3)
--------->
TOE2(3)
--------->
ARR14(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<----------
DOF2
tagcaaagagtaacaaacttaaagaggttgcattggatcctaaggaagtcagaag
gtaagtgaacatgtgtgacaaaattattatttgtgcttttttttt
5325100
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AGI:
At2g12940.1
Description:
UNE4 (unfertilized embryo sac 4); transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT2G13150.1); similar to bZIP transcription factor bZIP28 [Glycine max] (GB:ABI34675.1); contains InterPro domain Eukaryotic transcription factor, Skn-1-like, DNA-binding; (InterPro:IPR008917); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700)
Range:
from: 5324557
to: 5325483
Orientation: Forward
Links:
TAIR
MIPS
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publications
when using AthaMap.
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