Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------AHL20(2)                                                                                    --------->YAB1                                                                                   <---------YAB1                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                             <---------AHL20(1)                                                                            --------->AHL20(2)                                                                          --------->TOE2(3)  --------                                                                         --------->YAB1--------->ATHB12                                                                         <---------ICU4--------->ATHB51                                                                         --------->ATHB12   <--------                                             <-------TEIL               --------->ICU4<---------YAB1  --------->WRKY38(1)                       --------->CCA1(2)           <---------ATHB12   <---------LBD16 ------->ALFIN1                      --------->YAB1               ----------->GT1 --------->AHL20(2)   tgtgttgacttcaaaatttgtatgttatttgtttcacaaaaataagattcaaacttatggatttaagaaggaaaatcattaaatttttataattggggat  5300600                                                                      --------->YAB1               --------->ALFIN1             --------->ALFIN1          --------->ANAC55(2)   --------->TOE1(2)                ---------->DOF2                  <-------TEIL          --------->AtLEC2 --->GT1   <---------ZAT14      --------->AHL20(2)               <---------ATHB12  <----------DOF2 -ANAC46   --------->ZAT14 --------->MYB46(3)               --------->AtLEC2   <-----------GT1   aaaaacatgagactgaagtgttgttcttaaccaatataaaaagagggtcgagcaaactatccatccaaacatacataatattctcctttctccatccaaa  5300700                                             <-----------GT1                                      <---------ANAC46                                      <---------ANAC58                                  <------------CBF                                 <---------ICU4                                 --------->ATHB12                                 --------->MYB52(1)                                <---------YAB1     ------------>CBF              <---------ATHB12        --------->GLK1(2)      <----------DOF2<---------TOE2(3)              ------------>CBF-------- --------->YAB1        <-----------GT1<---------ANAC58<------------CBF  <----------DOF2   -----------   caaacataagtttctgagaggtttttctcaactctttattgcttattaaacgtttcaattgtgtttttgttctcctttctccaataactgatgacaatct  5300800                                      <---------AHL20(2)                                      --------->AHL20(2)                                 --------->YAB1                              --------->YAB1                         <---------YAB1<---------AHL20(2)                                   ---------                        <---------ARR11(3)           <-----------GT1                  ----------->GT1                        --------->ARR11(3)      --------->YAB1                      <---------AtLEC2    <-----------TGA1    --------->AHL20(1)     <---------YAB1                       <---------ANAC46    <-----------HVH21   <---------AHL20(1)    <-----------GT1                       <---------ANAC58 ->GLK1(2)             --------->RVE1(1)     <-----------GT1                        <---------ANAC58 ->CBF                 --------->CCA1(1)  <---------ICU4                    ---------->ID1  <--------   cgatatcgtcacggtgcaaaacaaaatatctttgatcatattaatttttatcattttcccatttctatttgatattttgtttttttgcatgtaaaaaaat  5300900                                                                                     ================                                                                                    <------ZmHOX2a(2)                                                                                    =================                                                                                   --------->ARR14(2)                                                                             --------->ATHB12                                                                            <---------YAB1                                                                            <---------ATHB12   ------                                                      <------MYB46(1)======================HOX2a_HOX2a                                                      <------MYB83   ------>ZmHOX2a(1)<---------ETT(1)                  <---------ANAC58                   <---------AtMYB61  ------------>CBF     <-------                  <---------ANAC58                <-----------RAV1(1)=======================HOX2a_HOX2a                  <---------ANAC46              <------------CBF    --------->TOE1(3)------>ZmHOX2a(2)     --------->ANAC46                       --------->ANAC46        --------->TOE2(3)--------->DEAR3(2) >AHL20(2)   <---------ICU4               <-----------GT1         <---------ATHB12 ------->TEIL<----- -AHL20(2)   --------->YAB1          <---------ARR14(2)       ------------>CBF     <---------ARR14(2)   gagttatacgtagaaacatgacttgttttatatgatgcagatttatactccattgttggtcttctccaatccttaacaatgaatggatccgacaatatca  5301000        --------->LBD16       <---------HSFB2a(2)       --------->HSFB2a(2)      <---------LBD16    ==============HOX2a_HOX2a                             --------------------->WRI1    ------>ZmHOX2a(1)                          ------>ZmHOX2a(1)                                  <-- ==========HOX2a_HOX2a                        <---------ALFIN1                               <------- ==========HOX2a_HOX2a                      ------>ZmHOX2a(1)                       --------->LBD16 --->ZAT6                                  <---------ALFIN1                        <---------ANAC58 --ARR11(3)                              ------>NtERF2  <------NtERF2              <---------ANAC58 ------GT1 <------ZmHOX2a(2)   <-----------HVH21       ------>NtERF2          <---------ICU4---------   ctactccttccggatcacggtctatgactcagccttcacttgcctcctcctccttgcccccattgagcccttcttcgtcaacattccgtcgcaattcatt  5301100                                <---------ANAC46                              --------->REM1(2)                             --------->ALFIN1                           ------>ZmHOX2a(1)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                      --------->At4g35610                           --------->TOE2(3)                      <---------ZAT2                             --------->ARR11(3)                      --------->ZAT2                             <---------ARR11(3)                      <---------At4g35610                    --------->AHL20(2)      <---------ANAC58                   <---------MYB52(1)                <---------TOE1(3)               <---------ANAC58                  <-----------TGA1   ----------->ARR10----------->GT1                <---------ANAC46                  <-----------HVH21<---------ZAT14   <---------TOE2(3)           <----------DOF2 -------YAB1     --------->ANAC46<xxxxxxxxxxxxxxxxsmallRNA(i)--------->YAB1   ------>NtERF2         - --ICU4 <------------------------ANAC81         --------------->AGL15  --------->ATHB12   <---------ZAT14 >AHL20(2)<----------DOF2----------->RAV1(2)   ----------------->AGL1------>ZmHOX2a(1)    --------->REM1(2)   accatcgatgagcttttctccgtcagctcctgtggagagtagagactcttccattaaggttaataaaaatccttcattgccccctttgggtgtgaagaga  5301200                                                                                              <------                 ------>NtERF2                                     <---------ANAC55(2)     --------->LBD16             --------->ANAC58                                      <---------ANAC58       <---------ANAC46             --------->ANAC58                                      <---------ANAC58  ------>ZmHOX2a(1)      ---------->DOF2                                       <-----------GT1       ------>NtERF2   --------->At4g35610                                --------->MYB52(2)        <---------ANAC58  <--  --------->RAP2.3(3)     <------ZmHOX2a(1)   --------->ATHB12     --------->ANAC55(2)   <---------LBD16 -------->At4g35610 <----------DOF2   <------ZmHOX2a(1)  <---------MYB46(3)     <---------ANAC58  <--   agagcagccaaaggcatggcacctttgaggagacattacaggactgtttcattggatagttgttacattacttactgaagttgcctccttctccgggtaa  5301300                                                   --------->MYB59                                        ------>ZmHOX2a(1)                                      ----------->RAV1(2)                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                   <---------ANAC58--------->MYB46(2)   --------->ICU4                                  <---------HSFB2a(1)          <---------YAB1                                  --------->HSFC1(2)<------MYB46(1)  --------->ICU4 ---------->ID1                   --------->HSFB2a(1)       --------->ICU4 <---------YAB1 xxxxxxxxxxx --P------>ZmHOX2a(1)             <---------HSFC1(2)<------MYB83   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -------DAG2    <-------GAMYB  <------ZmHOX2a(1)   --------->MYB111(1)  <---------YAB1<---------YAB1 --------DOF2   <---------At4g35610<---------ANAC58--------->MYB111(2)--------->YAB1  <---------TOE2(3)   cttttcctcttcaagttcagttgatggagaagaggatgcttcctggctcgagtttggtagcagtgattatactgatgatgaattgaataagattgcaaag  5301400             <---------AHL20(1)             --------->ARR11(3)             <---------ARR11(3)             --------->ARR14(3)             <---------ARR14(3)             --------->ARR14(2)                                                                   <--             <---------ARR14(2)                         ------>ZmHOX2a(1)                        <---             --------->AHL20(1)                        --------->TOE1(2)                       <-----    ------>MYB46(1)                                   ------>ZmHOX2a(2)                        ------    ------>MYB83               ------>MYB46(1) ------->TEIL ---------->DOF2  --------->ZAT14   ------  <---------MYB46(2)           ------>MYB83    <---------ARR14(2)            <---------ZAT18  <------  <---------MYB111(1)        <---------MYB59  <---------CCA1(2)              --------->ZAT18  -------  <---------MYB59            <---------MYB111(1)<---------At4g35610          <---------ZAT14  ------- xxxxx>smallRNA(i)           <---------MYB46(2)--------->ARR14(2)       <--------P            <------   agtaccaaacttcaagatattgcaaagagtaccaaacttcaagagattgtatctgatcctaagaaagtcagaaggtaagtgaacttgtatgactaaatta  5301500  Previous    Next  AGI:  At2g12900.1    Description:  DNA binding / transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT2G13150.1); similar to bZIP transcription factor bZIP28 [Glycine max] (GB:ABI34675.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 5300979    to: 5302562    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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