Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->AHL12(1)                                           <---------AHL12(1)                                           --------->KAN1                                          --------->AHL12(1)                                          <---------AHL12(1)                                          <---------AHL12(2)                                          <---------AHL20(3)                                          --------->AHL20(1)                                          <---------AHL20(1)                                          --------->AHL25(2)                                          --------->ARR11(3)                 ----------->RAV1(1)                                          <---------AHL25(2)                --------->AtMYB61                                          <---------ARR11(3)             --------->ANAC46                                          --------->AHL20(3)           <-----------GT1                                         <---------AHL12(3)         <---------AHL12(2)                                         --------->AHL12(2)         <---------YAB1                                         <---------AHL12(2)        <---------AHL20(3)                                         --------->AHL12(3)        --------->AHL25(2)                              ---------->DOF2                      <---------AHL25(2)            <---                       <---------YAB1    --------->AHL25(2)        --------->AHL20(2)  --------->DAG2                    --------->AHL25(3)   <---------AHL25(2)        --------->AHL20(3) ---------->DOF2 ----------GT1    <----------DOF2      --------->AHL20(2)    --------->TOE2(3) --------->AtMYB61 ----   ttaacttggtttttctcttacttttattttagcaaagttcaaaaaatattcgaaaattgtcaacttcaatattatacaccaccaaaaaaaaagttttcta  2342100                                                                                                   --                                                                                              <------MYB46(1)                                             <-----------------AGL1                           <------MYB83                                        --------->AHL20(2)                           <---------AHL25(1)                        <---------DOF5.7(1) --------->YAB1                           <---------AHL20(3)                       <----------DOF2  <---------AHL20(2)                           <---------AHL25(3)             --------->RVE1(2)      --------->AHL20(2)                               --------->AHL20(2)             --------->ARR11(3)     <---------AHL20(2)                         --------->TOE2(3)  <--             <---------ARR11(3)  <----------DOF2                               --------->YAB1--------     <---------MYB52(1)<---------DAG2 --------->WOX13(2)                    <-----------GT1  -------- <---------ZAT2        <---------DOF5.7(1)  <-----------GT1              --------->ANAC55(2) -------- <---------At4g35610  <---------ANAC58<---------WOX13(2)                 <---------ANAC55(2)<--------P ------STY1(2)        <---------ANAC58--------->AHL12(2)            --------->YAB5   --------->AHL20(3) ----->STY1(2)       ---------->ID1 --------->AHL25(3)             --------->ICU4    <---------AHL20(2)   gccagccgttttcaatatctcttggctttttctaacttttaatttataacaattttggcattctctgaaatgagtatgtaaccatattaaaatggtaggt  2342200        <---------AHL25(2)        <---------AHL20(3)        <---------AHL25(1)        ====================HOX2a_HOX2a        <---------AHL20(2)        ------>ZmHOX2a(1)                               <-----------GT1        --------->AHL12(3)       <---------MYB59                                --------->ARR11(3)        --------->AHL20(3)   <------MYB83                                     <---------ATHB12      --------->AHL12(2)     <------MYB46(1)   ------>ZmHOX2a(2)            --------->WOX13(1) >>>>>>>>>MYB98             --------->MYB59  <---------ARR11(3)           ------------>CBF ---->ZmHOX2a(1)            <---------AtMYB61--------->GATA12<---------AHL20(2) <-----------GT1 -------MYB59            <---------REM1(1)   --------->ARR11(3)   --------->RVE1(2)   ------>ZmHOX2a(1) ->MYB59<---------AHL12(3) <--------P <----------DOF2        --------->AHL20(2)<---------ICU4 ->MYB46(2)              --------->ALFIN1    <---------RVE1(2)   <---------ICU4--------->YAB1 ->MYB111(1)         ---------->DOF2  <---------DAG2       <---------WOX13(2)--------->WOX13(2) <----   cctaacttatttttttttggtttaaaagtgtaggtcctaacttttttgatcttcttgtgtcatttaaaaatcacaaaccaattatctccttccatgtgaa  2342300                                                                         <----------DOF2                                                                        <---------DOF5.7(1) ---------                                                                      --------->ARR11(3)   <---------YAB5                                             <----------DOF2          --------->GLK1(2)    --------->ICU4                        --------------->AtSPL8                        <---------ARR11(3)   <---------YAB1                        --------------->AtSPL3                        <-----------ARR10  --------->YAB5         --------->TOE1(3)                  <---------DOF5.7(1)   --------->DAG2         <---------ICU4         --------->TOE2(3)               <---------CCA1(2)       ---------->DOF2         --------->YAB1      <-----------GT1  <---------At5g28300------->TEIL    <---------RVE1(2)             <---------ATHB12   <---------MYB46(3) <-----------GT1--------->TOE1(3)    --------->ARR11(3)       --------->ANAC46 -----ARR11(2)--------->ZAT6         --------->TOE2(3)    <---------ARR11(3)   ------>ZmHOX2a(1)   tacatttgttaccttaactctgagttactgtacattcaaccttgaatcttttgttcttgagattttaaaaagtatcttttcctccactaaatcatgattc  2342400                                        <---------ZAT18                                        --------->ZAT14                                        <---------ZAT14        <---------WOX13(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                      ----   --------->WOX13(2)        <---------AHL20(2)  <---------ALFIN1                               <----   <---------WOX13(2)       <---------AHL20(2)   --------->AtMYB61   <---------ATHB12         ------- <---------AHL20(2)     <----------DOF2 --------->ZAT18  <---------ANAC46  ----------->GT1   -------- >YAB5  --------->WOX13(2)  --------->AHL25(3)  --------->MYB46(3)  --------->RVE1(2)      <---------AHL12(2)   tatttagtttagtttagttttgttttcttttttattttgtagtgctctcaaccactctgacttgaaaacaaatcaaaccgaaaaaaaaaaaaaaaaaaac  2342500                                                --------->ARR11(2)                                            --------->DOF5.7(1)                                           --------->DOF5.7(1)                 <---------GLK1(1)         ---------->DOF2                                <-------TEIL         --------->ANAC58              --------->ANAC58                   --------->GLK1(2)         --------->ANAC58              --------->ANAC58                   <---------ARR11(3)     --------->GLK1(2)             --------->ANAC58                       --------->ARR14(2)  ------- ----->YAB5   <---------ATHB12     --------->ANAC58                       <---------ARR14(2)  <------ ------ID1------------>CBF --------->CCA1(2)--------->DAG2     <----------DOF2------>ZmHOX2a(1) -->MYB52(1)  --------->ICU4       ------------------------>ANAC81        --------->RVE1(2)  <------- ->DOF5.7(1)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ARR11(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   gactaagaagctagcaatgagttcccaagagatgaagaagcaagaaaaaggaaacgaagttgtcactttcgaagaaaatcctagcacttatgttcatcat  2342600                                                                                              -------                                                                                        --------->AHL25(1)                                                                                        <---------AHL12(3)      --------->DOF5.7(1)                                                               <---------AHL20(3)      ---------->DOF2                                                                   --------->AHL20(2) --------->ANAC58                                                             --------->AHL12(1) --------->ANAC46                            --------->KAN4(2)                <---------AHL12(1)----- --------->ANAC58                       <---------TOE2(3)      <------ZmHOX2a(1)   ----------->GT1--- -->YAB1                        --------->ANAC58      ----------->GT1     <---------YAB1--------->AHL20(3) ---ICU4                   --------->ZAT18  --------->KAN1 --------->ICU4 ----------->GT1     ------- --YAB5    --------->TOE2(3)    --------->ANAC58    ---------->DOF2    <---------AHL20(2)     -------   cacacgaaaaaagcctcaatggttttaagtgagcaagaaatagaggttattctacaaagtaataaggagacatataatgaaaaattagaaaaaaatacga  2342700                                                                                                    <                                                                                    --------->DOF5.7(1)                                                           --------->AtLEC2         --------->DAG2 <-                                                      --------->ANAC55(2)          --------->DOF5.7(1)                                                      --------->ANAC58             <xxxxxxxxxxxxxxxxx                                                      --------->ANAC46            ---------->DOF2 <--                                                      --------->ANAC58          <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                      <---------ANAC55(2)    --------->At4g35610  --- -->ANAC58                                         <------ZmHOX2a(2)     <---------GATA12 --------->ATHB12 ----->DOF2                                       --------->ARR11(3)     --------->GATA12--------->ANAC58 ------>DOF5.7(1)<------MYB46(1)                 --------->YAB1       <---------ALFIN1   <---------YAB1 -->ANAC58       <------MYB83                 ---------->DOF2 ------->TEIL<---------At4g35610  <----- -->ANAC46 ---------->DOF2            <-------TEIL<---------ARR11(3) <---------REM1(2)   --------->ANAC58   aagagaatgctgagaaagttggtattgaagaaggaaatggttcatcttcaaagatcacgccatgcattttctacacatctgatgaaaaggcacgattgag  2342800                                                                          <---------AHL25(3)                                                                          --------->AHL25(2)                                                                          <---------AHL25(2)                                                                          --------->AHL20(2)                                                                          <---------AHL25(1)                                                                          <---------AHL20(2)                                                                          --------->AHL20(3)                                                                          --------->AHL25(1)                                                                          <---------AHL20(3)                                                                         --------->AHL12(1)                                                                         --------->AHL20(2)                                                                         <---------AHL12(1)                                                                         <---------AHL20(2)                                                                         <---------AHL25(2)                                                                         <---------AHL25(1)                                                                         <---------AHL25(3)                                                                         <---------AHL12(3)                                                                         --------->AHL25(3)          --------->AtMYB61                                 <---------MYB52(1) --------->TOE2(3)    --------->ANAC58                                   --------->MYB52(1)--------->AHL12(3)         -    --------->ANAC58                                   ------>MYB46(1)------>MYB46(1)        <-------   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  ------>MYB83   ------>MYB83         <---------ICU4 --------->WRKY18(1)                                  ----------->HVH21<---------WOX13(2)  <--------HAHB4 -----------HVH21     <----------DOF2                <---------MYB111(1) --------->AHL25(1)<---------KAN1 --------MYB46(3)    <---------ANAC58                <---------MYB46(2)--------->WOX13(2) --------->ICU4 xxxxsmallRNA(si3)   <---------ANAC58                <---------MYB59<---------MYB59--------->WOX13(2) -------AtMYB61 --------->ATHB12    ----------->GT1------->TEIL  <-----------GT1   <---------WOX13(2) ------>ALFIN1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------YAB1 ----TOE2(3)   <---------YAB1    <---------ANAC46 <---------TCP16(2)--------->TOE2(3)  <---------YAB1   gtggtcaagcgaccttcacgattgctttgttaatgctgtggaaaaacttggtggacctaacagttagtaacctaattaaattcttaattccgattattag  2342900                                                                               --------->AHL20(2)                                                                             <---------AHL20(3)                                                                             <---------AHL25(2)                                                                             --------->AHL25(2)                                                                             --------->AHL20(3)                                                                            --------->AHL12(2)                                                                            <---------AHL12(2)                                                         <---------ANAC46  --------->AHL25(1)                                                         <---------ANAC58  --------->AHL20(3)                                                   <---------YAB5          <---------AHL20(3)                                              --------->TOE2(3)            --------->AHL20(2)                                              <----------DOF2          --------->YAB1                                           <-----------GT1            <---------YAB1      <---------ANAC58                   <---------WOX13(1)         --------->WOX13(1)  <-----------GT1      <---------ANAC58                  <---------RVE1(2)<---------ANAC58  <---------AHL20(2)       < -------->AHL12(2)                     --------->ATHB12  <---------AtLEC2 --------->AHL20(2)  ------- --YAB1                               <---------YAB5<---------ICU4<<<<<<<<<GATA-1<-----------GT1 <---   tttatatttcttgagtttcttcaatatttcttcacttatattgatttactttaaacattgcatgttttatctatcataaaattatacatttctccatatt  2343000  Previous    Next  AGI:  At2g06020.1    Description:  myb family transcription factor. similar to UNE16 (unfertilized embryo sac 16) [Arabidopsis thaliana] (TAIR:AT4G13640.2); similar to UNE16 (unfertilized embryo sac 16), transcription factor [Arabidopsis thaliana] (TAIR:AT4G13640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23688.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABN08846.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR0 Range:  from: 2342532    to: 2346204    Orientation: Forward Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.
	printer-friendly version