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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
----------->
RAV1(1)
<---------
ARR11(3)
--------->
AtMYB61
<---------
AHL20(1)
--------->
ANAC46
--------->
AHL20(1)
<-----------
GT1
<---
---------->
DOF2
<---------
YAB1
--------->
DAG2
<---------
YAB1
--------->
ARR11(3)
--------->
AHL20(2)
---------->
DOF2
----------
GT1
<----------
DOF2
--------->
AHL20(2)
--------->
TOE2(3)
--------->
AtMYB61
----
ttaacttggtttttctcttacttttattttagcaaagttcaaaaaatattcgaaaattgtcaacttcaatattatacaccaccaaaaaaaaagttttcta
2342100
--
<------
MYB46(1)
<-----------------
AGL1
<------
MYB83
<---------
ARR11(3)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ARR11(3)
<----------
DOF2
--------->
TOE2(3)
<--
<---------
MYB52(1)
<----------
DOF2
--------->
YAB1
--------->
YAB1
--------
<---------
ZAT2
<---------
DAG2
<-----------
GT1
<-----------
GT1
--------
<---------
At4g35610
<---------
ANAC58
<---------
AHL20(2)
--------->
ANAC55(2)
--------
------
STY1(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
ANAC55(2)
<--------
P
----->
STY1(2)
---------->
ID1
<---------
AHL20(2)
--------->
ICU4
--------->
AHL20(2)
gccagccgttttcaatatctcttggctttttctaacttttaatttataacaattttggcattctctgaaatgagtatgtaaccatattaaaatggtaggt
2342200
====================
HOX2a_HOX2a
------>
ZmHOX2a(1)
<---------
MYB59
------>
ZmHOX2a(1)
<------
MYB46(1)
<-----------
GT1
<------
MYB83
<-----------
GT1
>>>>>>>>>
MYB98
<---------
AtMYB61
<---------
ATHB12
---->
ZmHOX2a(1)
--------->
MYB59
------>
ZmHOX2a(2)
--------->
WOX13(1)
-------
MYB59
--------->
ALFIN1
--------->
ARR11(3)
------------>
CBF
->
MYB111(1)
<---------
REM1(1)
<---------
ARR11(3)
<---------
ICU4
--------->
ARR11(3)
->
MYB59
<---------
AHL20(2)
<--------
P
<----------
DOF2
--------->
AHL20(2)
--------->
YAB1
->
MYB46(2)
---------->
DOF2
<---------
DAG2
<---------
AHL20(2)
<---------
ICU4
cctaacttatttttttttggtttaaaagtgtaggtcctaacttttttgatcttcttgtgtcatttaaaaatcacaaaccaattatctccttccatgtgaa
2342300
<----------
DOF2
<---------
ARR11(3)
--------------->
AtSPL8
--------->
GLK1(2)
<---------
YAB1
--------------->
AtSPL3
<-----------
ARR10
--------->
ICU4
--------->
ZAT6
<----------
DOF2
--------->
ARR11(3)
<---------
ICU4
--------->
TOE2(3)
<---------
CCA1(2)
--------->
DAG2
--------->
YAB1
--------->
TOE1(3)
--------->
TOE1(3)
---------->
DOF2
<---------
ATHB12
<-----------
GT1
<---------
At5g28300
------->
TEIL
--------->
ARR11(3)
--------->
ANAC46
<---------
MYB46(3)
<-----------
GT1
--------->
TOE2(3)
<---------
ARR11(3)
------>
ZmHOX2a(1)
tacatttgttaccttaactctgagttactgtacattcaaccttgaatcttttgttcttgagattttaaaaagtatcttttcctccactaaatcatgattc
2342400
<---------
ALFIN1
--------->
ZAT18
<---------
ZAT14
<---------
ZAT18
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
AHL20(2)
--------->
AtMYB61
<---------
AHL20(2)
--------->
MYB46(3)
<---------
ATHB12
<----
<---------
AHL20(2)
<----------
DOF2
--------->
ZAT14
<---------
ANAC46
----------->
GT1
-------
tatttagtttagtttagttttgttttcttttttattttgtagtgctctcaaccactctgacttgaaaacaaatcaaaccgaaaaaaaaaaaaaaaaaaac
2342500
<---------
GLK1(1)
---------->
DOF2
<---------
ATHB12
--------->
ANAC58
<-------
TEIL
--------->
ICU4
--------->
ANAC58
--------->
GLK1(2)
--------->
ANAC58
--------->
ANAC58
<---------
ARR11(3)
--------->
ANAC58
------------------------>
ANAC81
<---------
ARR14(2)
-------
--------->
GLK1(2)
--------->
ANAC58
--------->
ARR14(2)
<------
------
ID1
------------>
CBF
--------->
CCA1(2)
--------->
DAG2
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
-->
MYB52(1)
<xxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<----------
DOF2
------>
ZmHOX2a(1)
gactaagaagctagcaatgagttcccaagag
atgaagaagcaagaaaaaggaaacgaagttgtcactttcgaagaaaatcctagcacttatgttcatcat
2342600
---------->
DOF2
-----
--------->
ANAC58
-------
--------->
ANAC58
<---------
TOE2(3)
--------->
ICU4
----------->
GT1
-------
--------->
ANAC46
--------->
ANAC58
----------->
GT1
<---------
YAB1
--------->
AHL20(2)
-->
YAB1
--------->
ZAT18
--------->
KAN4(2)
<------
ZmHOX2a(1)
----------->
GT1
---
ICU4
--------->
TOE2(3)
--------->
ANAC58
---------->
DOF2
<---------
AHL20(2)
-------
cacacgaaaaaagcctcaatggttttaagtgagcaagaaatagaggttattctacaaagtaataaggagacatataatgaaaaattagaaaaaaatacga
2342700
--------->
AtLEC2
<
--------->
ANAC58
--------->
ATHB12
--------->
ANAC46
--------->
ANAC58
<---------
ANAC55(2)
--------->
DAG2
<-
--------->
ANAC55(2)
<xxxxxxxxxxxxxxxxx
--------->
ANAC58
---------->
DOF2
<--
<------
ZmHOX2a(2)
<xxxxxxxxxxxxxxxxxxx
smallRNA(si3)
----->
DOF2
--------->
ARR11(3)
--------->
At4g35610
---
-->
ANAC46
<------
MYB46(1)
--------->
YAB1
<---------
ALFIN1
--------->
ANAC58
-->
ANAC58
<------
MYB83
---------->
DOF2
------->
TEIL
<---------
At4g35610
<-----
-->
ANAC58
---------->
DOF2
<-------
TEIL
<---------
ARR11(3)
<---------
REM1(2)
<---------
YAB1
aagagaatgctgagaaagttggtattgaagaaggaaatggttcatcttcaaagatcacgccatgcattttctacacatctgatgaaaaggcacgattgag
2342800
--------->
AtMYB61
<---------
MYB52(1)
--------->
TOE2(3)
--------->
ANAC58
------>
MYB83
------>
MYB83
--------->
ANAC58
--------->
MYB52(1)
<---------
AHL20(2)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
------>
MYB46(1)
------>
MYB46(1)
--------->
WRKY18(1)
----------->
HVH21
--------->
AHL20(2)
-----------
HVH21
<----------
DOF2
<---------
MYB59
<---------
MYB59
<-------
--------
MYB46(3)
<---------
ANAC58
<xxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
--------->
ICU4
xxxx
smallRNA(si3)
<---------
ANAC58
<---------
MYB111(1)
<---------
AHL20(2)
<---------
ICU4
-------
AtMYB61
--------->
ATHB12
----------->
GT1
------->
TEIL
<-----------
GT1
<---------
YAB1
------>
ALFIN1
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<---------
MYB46(2)
--------->
AHL20(2)
<--------
HAHB4
----
TOE2(3)
<---------
YAB1
<---------
ANAC46
<---------
TCP16(2)
--------->
TOE2(3)
<---------
YAB1
gtggtcaagcgaccttcacgattgctttgttaatgctgtggaaaaacttggtggacctaaca
gttagtaacctaattaaattcttaattccgattattag
2342900
<---------
AtLEC2
<---------
ANAC46
--------->
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
<---------
ICU4
--------->
AHL20(2)
--------->
TOE2(3)
--------->
YAB1
<----------
DOF2
<---------
YAB1
<
<---------
ANAC58
<-----------
GT1
--------->
WOX13(1)
<-----------
GT1
<---------
ANAC58
<---------
WOX13(1)
<<<<<<<<<
GATA-1
<-----------
GT1
<---
--
YAB1
--------->
ATHB12
<---------
ANAC58
--------->
AHL20(2)
-------
tttatatttcttgagtttcttcaatatttcttcacttatattgatttactttaaacattgcatgttttatctatcataaaattatacatttctccatatt
2343000
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AGI:
At2g06020.1
Description:
myb family transcription factor. similar to UNE16 (unfertilized embryo sac 16) [Arabidopsis thaliana] (TAIR:AT4G13640.2); similar to UNE16 (unfertilized embryo sac 16), transcription factor [Arabidopsis thaliana] (TAIR:AT4G13640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23688.1); similar to Homeodomain-related [Medicago truncatula] (GB:ABN08846.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR0
Range:
from: 2342532
to: 2346204
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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