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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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      <----------DOF2 --------->ANAC58
      ------>ZmHOX2a(1)
      <---------------AGL15
     --------->TOE2(3)--------->ANAC58
    <-----------------AGL2                                                <---------CCA1(2)<--------
    ----------------->AGL3    --------------->AtSPL3                   <----------DOF2  ----------->GT1
    <-----------------AGL3    --------------->AtSPL8                <-----------GT1  --------->WRKY18(1)
------>ZAT18      --------->ANAC58                              <----------DOF2   <---------TOE1(3)
-------ZAT18      --------->ANAC58                           <-----------GT1      <---------TOE2(3)
-->DOF2         <-----------RAV1(2)             ------->TEIL<-----------GT1   <----------DOF2 <-----
 
cccactatcctttaatgggccaggcatgctatttctgtacaatacaagatggacctgaatgttttaacttttaacttttatctttaaggtcaagttaatt  652200
                                                                        <---------AHL20(2)
                                                                        <---------YAB1
                                                                       --------->YAB1     <<<<<<<<<MYB98
                                                                       --------->TOE2(3) -----------
                                                                      <---------------AGL15
                                                                     <-----------------AGL3
          ------>MYB83                    <---------ANAC46       --------->ANAC55(2)    ----------->GT1
-AHL20(2) ------>MYB46(1)            --------->At4g35610         --------->YAB1      ------->TEIL
----WOX13(1)        <------ZmHOX2a(2)<---------At4g35610        ---------->ID1    --------->ICU4
 
gaaaacaaaaaccaaatttgtggatcaatttggatgcctcagcctacgtataaaaacatgtttttttttcgtaatattaatggaaatgaatatgttaaaa  652300
                                                              >>>>>>>>>>WRKY18
                                                              <---------WRKY18(1)
                                                   <---------AHL20(2)
                                                   --------->AHL20(2)   --------->AHL20(2)
                                               --------->AHL20(2)      --------->YAB1
                                          <---------AHL20(2)  >>>>>>>>>>WRKY40
                                         <---------AHL20(1)   >>>>>>>>>>WRKY62
                                         --------->AHL20(2)  --------->WRKY38(1)
                                    --------->AHL20(1)       --------->WRKY12
                                 --------->YAB1<---------AHL20(2)     --------->AHL20(2)
                          <----------DOF2--------->AHL20(1)  --------->WRKY45  ----------->GT1
                       <---------ALFIN1  <---------AHL20(2)<----------DOF2    <---------TOE2(3)
--------->AHL20(2)  --------->ETT(2)<---------AHL20(2)  --------->ARR11(3) --------->AHL20(1)
>GT1 <-------TEIL   <---------ETT(2)--------->AHL20(2)  <---------ARR11(3)--------->YAB1      ------
 
aaaaaaaatacatgtttttttcgtcgacacttttaaaaataaaataaaatttaaataaatgtctttgaccaaaataaaaataatgtaaaatttgggagtg  652400
                                          <---------AHL20(2)
                                         --------->AHL20(2)   <---------ANAC55(2) ------------>CBF
                                      --------->AHL20(2)<---------AHL20(2)       --------->ANAC46
         ----------->GT1              <---------AHL20(2)<---------YAB1     <---------AHL20(1)
       <---------LBD16               --------->ICU4     --------->AHL20(2) --------->AHL20(2)
     <---------ZAT2           <---------ARR14(2)   <---------AHL20(2)      --------->AHL20(1)      <
     --------->ZAT2           --------->ARR14(2)--------->ARR11(3)         <---------AHL20(2)      -
    ------->TEIL              <---------AGP1    <---------ARR11(3)      --------->YAB1            --
--->ALFIN1    --------->AHL20(2)------>ZmHOX2a(2) --------->AHL20(2)   <---------ATHB51      <------
 
gggaatgtagctcggaaaaaaatagggtatgtagatcggaattaataaatagattttatattattacataaacaataataaaatacacaatgttgtcttt  652500
               --------->YAB1
             --------->AHL20(1)                <-----------GT1
             --------->AHL20(2)            <---------TOE2(3)
   <---------ICU4 --------->AHL20(1)       <---------YAB1
   --------->AHL20(2)                     <---------AHL20(2)                  <---------DEAR3(2)
   <---------AHL20(2)    ------------>CBF --------->AHL20(2)      --------->AHL20(2)         <------
---------AHL20(2) <---------AHL20(1)      --------->YAB1          <---------AHL20(2)        <-------
-------->AHL20(2) <---------AHL20(2)    <---------YAB1           --------->AHL20(2) <----------DOF2
------->AHL20(2)  --------->AHL20(2) --------->ICU4       ----------->RAV1(1) *TSS <---------DAG2 <-
----DOF2    --------->YAB1          <----------DOF2     --------->At4g35610  ------>ZmHOX2a(2)------
 
atttaattaatacaaaaataataaaatagacaatgttgtctttattaatattacttctcagccccaaaattaatctttgatcggtcccttttgttttatc  652600
  <---------TOE1(3)
  <---------TOE2(3)        <-----------GT1
-----GT1               <------------------------ANAC81
----GT1               <----------DOF2              <---------AHL20(2)          <-----------GT1
---------DOF2   <----------DOF2   <-----------GT1  --------->AHL20(2)<-----------HVH21             <
---->ID1   <---------At4g35610<----------DOF2--------->LBD16        <----------DOF2                -
 
gttttagggtttgtagctcctttctctttttttcttttctcaatttcccccaaattaaaaaaaaactctctctttcagagatttacaaatttcatttctc  652700
                                                  --------->LBD16
                                                 <---------LBD16                              ------
                    <---------ARR11(3)          <---------ANAC46                   --------->LBD16
           ---------->DOF2                      <---------ANAC58                 <---------LBD16
     <---------ARR14(2)  ---------->ID1         <---------ANAC58               <---------WRKY18(1) <
     --------->ARR14(2) <-----------GT1         <---------AtLEC2        <---------YAB1        <-----
  --------->ANAC46  --------->ARR11(3)      <---------ANAC58        <---------ARR14(2)        <-----
---------ARR14(2)   --------->AHL20(1)      <---------ANAC58        <---------GLK1(2)      ---------
-------->ARR14(2)   <---------AHL20(1) <----------DOF2              --------->ARR11(3)--------->ZAT14
 
caaatccgaaaccccaaagtgaatatttttccttctgggtttcttttgtttgcctggaaacatttgtctcagattttgattttgaccggagtactcatat  652800
                 <------NtERF2
                ----------->RAV1(1)
               ----------->HVH21
               <---------ETT(2)
             ------>NtERF2
 --------->LBD16------>NtERF2
 ------>NtERF2 --------->DEAR3(1)                                                             ------
<---------DEAR3(1)                                                       --------->ARR11(3)   <-----
--->ARR14(2) --------->LBD16                                             <---------ARR11(3)   <-----
---------LBD16--------->RAP2.3(1)                              <---------ZAT6                 <-----
----GLK1(2)  <---------ATERF1(1)                               <-----------RAV1(1)    <---------ZAT14
----ARR14(2)<---------DEAR3(1)            <-----------GT1 --------->TOE2(1)          <-----------HVH21
>YAB1      <---------LBD16         <---------ANAC46       --------->TOE1(1) <----------DOF2   <-----
 
tctccggcgatttctccggcgacatcgtttgtgaaatggagggaattactcatccaatacctcgtactgttgaagaggtctttagcgacttcagaggtcg  652900
                                                                               <---------ARR14(2)
                                                                            --------->ANAC55(2)
                                                                            <---------ANAC55(2)
--------->ZAT2                                                          --------->YAB1
<---------ZAT2                                                         <---------YAB1
--->ETT(2)                                                        --------->YAB1
----DEAR3(1)                                                    --------->GLK1(2)           <-------
----WRKY12  ---------->DOF2                 <---------YAB1   <---------ANAC58  --------->ARR11(3)
----ETT(2)<---------YAB1--------->MYB52(1) <---------GLK1(2) <---------ANAC58  --------->ARR14(2) <-
----WRKY38(1)       --------->ZAT6  <---------AtMYB61    <---------TGA1a--------->ATHB12  <---------
 
acgagctggtcttattaaagctctcactaatggtcagttttggtctgattcttgtttctcacttgcgaatcagaatgataagtatctacagagttacgat  653000
                                                                          --------->GLK1(2)
                                           <---------AHL20(2)            <---------GLK1(2)
    <----------DOF2                  <----------DOF2                  <---------TOE2(3)
---------->ID1                    --------->ARR11(3)                 <-----------GT1
--YAB1                            <---------ARR11(3)                ----------->HVH21
----------RAV1(1)          ---------->DOF2<---------AHL20(2)      --------->CCA1(2) <---------ANAC46
--GT1               ----------->GT1  <---------DAG2     <----------DOF2  <---------ARR14(2)
 
tttgtggcatttgggtttttcatttgttaaaaaagaagaactttttttattttgggtttcttttgtgagatttgacgattctgggttttgtgttttgttt  653100
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AGI:  At2g02470.1   
Description:  PHD finger family protein. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT1G14510.1); similar to PHD5 [Glycine max] (GB:ABI97244.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011)
Range:  from: 652579    to: 654914    Orientation: Forward
Links:  TAIR  MIPS 
 
 
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