Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ATHB12                                         ------->MYC3                                         <-------PIF5          ====================================MYC_MYB                                         ------->MYC2         --------->MYB52(2)                                         ------->PIF5         <---------MYB46(3)                                         <-------MYC2         --------->MYB55(2)                                         <-------MYC3--------->CCA1(2)                          -----                                        --------->bZIP60(2)  <---------AtMYB61                  <----                                        --------->ANAC58     --------->ALFIN1                   -----                                        <---------ANAC55(2) <------NtERF2                <---------ANAC55(1)                                        --------->ANAC46    =======================================MYC_MYB                                        --------->O2 --------->ARR14(1)                  <---------ANAC58                                        --------->ANAC55(2) <-------GAMYB                --------->O2                                        ============================MYC_MYB              <---------ANAC46                                        ============================MYC_MYB              <---------ANAC58                                        <---------TGA1a    <---------MYB46(3)            <---------TGA1a                                        --------->ANAC58  <---------DREB2C(2)            --------->TGA1a                                        <---------O2--------->ARR14(2)                   <---------O2                                      <-----------RAV1(2) --------->ALFIN1            ----------->HVH21                               --------->ALFIN1     --------->ARR11(1)  <------MYB46(1) ----------->STF1                              <-----------HVH21     <---------ARR14(2)  <------MYB83  ----------->TGA1                             <---------ANAC58      <------ZmHOX2a(1)   <---------DEAR3(1)<---------bZIP60(2) ------>HSFB2a(2)            <---------ANAC58<---------WOX13(1)<-------GAMYB      =================bZIP_DOF -------HSFB2a(2)     <---------MYB52(1)--------->TGA1a   <---------DEAR3(1)      ---------->DOF2 >ARR14(2)           <-------GAMYB    <---------ALFIN1--------->SPL7   <---------DREB2C(2)      <---- -ARR14(2)           =============================MYC_MYB<---------ABI4(1)--------->ALFIN1 --------->ALFIN1   ctcgaagcgaaacgaggggagaccgttgagagcgtgagggccacgtgattggaggatacggcggtggttgtagtcggtgttgacgaaagtgacgtggaag  29457000                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----             --------->ZAT2                                                                      ----            <-----------ARR10                                            <---------ANAC58        ----           <------ZmHOX2a(1)                                             <---------ANAC55(1)     ----      --------->ALFIN1                                                   <---------ANAC46       -----    <---------ANAC58                                                     <---------ANAC55(2)    -----    <---------ANAC46                                               ------->TEIL               -------    <---------ANAC58                    <---------bZIP60(2)   --------->CCA1(2)               <<<<<<<ZML2 ---->HSFB2a(1)                         <-----------RAV1(1)<---------TOE1(3)             --------->At4g35610 -----HSFB2a(1)                         <---------REM1(1)  <---------TOE2(3)           <---------ZAT18 ---->HSFC1(2)<---------ANAC58      <--------P             --------->DAG2<---------ANAC58<---------At4g35610 -----HSFC1(2)<---------ANAC58     <-------GAMYB     <---------ANAC46    --------->ANAC55(2)  <------   cctctagcgtggaggagcttggctagtttcagcattgggttgatgtggccttgtgctggataaggtatgcacattgcgtgaggtttctgtgagctagaac  29457100                                                                                        <---------ICU4                                                                                        --------->ATHB12                                                                                        --------->ATHB51                                                 --------->ANAC46                      --------->ICU4                                       <---------YAB1                                  <---------YAB1 ----->DREB2C(2)                       --------->ICU4                                  <---------ATHB12 --->GAMYB                          --------->ICU4                            <---------ARR14(2) ----->ANAC58                       <---------YAB1--------->LBD16             --------->ARR14(2) ----->ANAC46                     --------->YAB1 --------->ANAC58        <---------ANAC58 ----->ANAC58                    --------->ICU4  --------->ANAC58        <---------ANAC46 ----->RAP2.6(2)               --------->YAB1    <---------ANAC55(2)     <---------ANAC58 <---------WOX13(1) ----->DEAR3(1)               --------->ICU4     --------->ANAC55(2) --------------------->WRI1 ---->DEAR3(2)              <XXXXXXXXXXXXXXXXXXXXMIR414         --------->ANAC46       <---------ATHB51 ---->MYB46(3)          ----------->TGA1  <---------WOX13(1)    --------->ANAC58<---------ANAC58 -->ARR14(2)        <---------TOE2(3)--------->YAB1             --------->ANAC58<---------ANAC58 ---ARR14(2)   ------>ZmHOX2a(1) <---------YAB1 <---------LBD16--------->WOX13(1)   ------------>ATHB5   cgccatgttgttccatccttttgacgatgacgatgatgatgatgatggattccgcaacgttgagtcactcaacttgagtgtatcgtcccataattgatag  29457200                                                                                             --------                                                                                        ------>NtERF2                                                                                        <---------RAP2.6(3)                                                                                       --------->RAP2.6(2)                                                                                       --------->RAP2.3(2)                                                                                       >>>>>>>>>AtERF-5                                                                                       --------->ANAC46                                                                                       --------->DEAR3(1)                                                                                       >>>>>>>>>AtERF-2                                                                                       >>>>>>>>>AtERF-1                                                                                       >>>>>>>>>AtERF-4                                                                                 --------->YAB1                                                                           <---------YAB1<------NtERF2                                                                    <---------MYB52(1) >>>>>>>>>AtERF-3                                                                  <---------DEAR3(2)   --------->RAP2.3(3)                                                                ---------->ID1  <---------YAB1                                                            <---------ANAC55(2) <---------AHL20(2)                                                            <---------ANAC58   --------->AHL20(2) <--                                                            <---------ANAC58--------->AHL20(2)-------                       --------->ARR14(2)           <------ZmHOX2a(1)   <---------YAB1--------->ERF1          ----------->GT1                        <------ZmHOX2a(1)<---------MYB46(3)  --------->RAP2.3(1)   tggaagaagagagagtgatactttggaacctcttggtatagttttggatgaggaggaagaatacttgtcggtttgtgattatataatagccgccataagg  29457300                                           <------------CBF                                 ---------->DOF2                              <----------DOF2                              <---------DAG2                             <------NtERF2--------->ATHB12                            <---------RAP2.6(3)        <---------ANAC58                            ------>NtERF2 --------->ATHB51  <---------ANAC46                           --------->DEAR3(1)          <---------ANAC46                           --------->RAP2.6(2)         <---------ANAC58<---------At4g35610                          <---------RAP2.6(2)          <---------ANAC55(2)                --------->ATHB51                      <------------CBF    <---------ICU4    <---------ANAC58     --------->SPL7                    --------->AHL20(1)   <---------ATHB12   <---------ANAC58     ---------->DOF2 -->DOF2            <---------AHL20(2)   <---------YAB1--------->O2    --------->At4g35610--------->AHL20(2) -----TEIL          --------->AHL20(2)   --------->ICU4--------->ANAC55(2)     <---------SPL7 -->DAG2  *TSS     --------->AHL20(2)    <---------ATHB51  ---------->ID1     <---------ANAC46   ctcgtttcaaaaaaaaaaaaaaaaaattgccgccttaaggcccataattgaaagactacgtgtcgttttagttatctgcgtcgtaaggcccataatttag  29457400                                                                          <---------At4g35610                           --------->LBD16        ---------->ID1          --------->At4g35610                          --------->LBD16        <-----------GT1         --------->ANAC58                         --------->HSFB2a(2)    <-----------GT1          --------->ANAC58                      <---------ARR14(2)        *TSS                 <---------ANAC46                   <---------TOE2(3)        <----------DOF2          --------->ANAC55(2)          ---               <------------CBF       --------->ARR14(2)             <---------ANAC55(2)         ----              --------->ATHB12     <---------ANAC46     <---------HSFB2a(2)                      <---              <---------AHL20(2)   <---------ANAC58  <----------DOF2 <---------ANAC58         -------             <---------AHL20(2)    <---------ANAC58  ------>ZmHOX2a(1)  --------->SPL7  <-------TEIL    <------NtERF2  <---------TOE1(3)  <---------ARR14(2)--------->HSFB2a(2)     --------->ANAC46 <---  <---------DEAR3(1)  --------->ARR14(2)  ------>ZmHOX2a(1)          <---------ANAC58  <-----------ARR10   aacgtcgtcgttttatttattgaggttcccgagttttgcgtttcctctttttatccttttagaaacgatttgcgtaagctaaacgcgaggttcttatcag  29457500                                                                                   --------->bZIP60(1)                                                                                   <---------bZIP60(1)                                                       --------->ANAC58            --------->ANAC58                    <---------MYB52(1)                 --------->ANAC58            --------->ANAC58                   --------->At5g28300               --------->ALFIN1           ----------->HVH21                  ----------->GT1                   <-------MYC2         <---------ALFIN1                  --------->RAP2.6(2)               ------->MYC2        --------->ZAT18                 --------->RAP2.3(1)                ------->MYC3        <---------ZAT18             <                 <------NtERF2                      <-------MYC3       --------->ANAC58            -- ------>GLK1(2) ------>NtERF2                  --------->SPL7     --------->ARR14(2)           ------ ----->ARR14(2)<---------DEAR3(1)       <---------DOF5.7(2)       <---------ARR14(2)         <------- ------GLK1(2) --------->ANAC46       --------->DOF5.7(2)  ---------->DOF2      ----------->TGA1   <- -->YAB1   --------->DEAR3(2)        --------->TOE2(3)--------->SPL7   --------->ANAC46     <------ZmHOX2a(1) ------ARR14(2)--------->DEAR3(1)    --------->TOE1(3)--------->ZAT18  --------->ANAC58     =========   attctatcgttgaaacgacgccgtaacttaattcgatatcgttaacgcgtacaacgtgcgccaaagcatttacgcgcactcggtgacgaaacgaggactc  29457600                   ----------->GT1              --------->DEAR3(1)             <------NtERF2            --------->ABI4(1)            ------>NtERF2           --------->DEAR3(1)          <------NtERF2          <---------ABI4(2)          ----------->HVH21          --------->ATERF1(1)         ------>NtERF2         <-----------HVH21         <---------ATERF1(1)        --------->ANAC58        --------->ANAC58        --------->ANAC46      --------->ANAC46      --------->ANAC58      --------->ANAC55(2)      <---------ANAC55(2) --------->DAG2                               ------>ZmHOX2a(2)      --------->ANAC58   ---------->DOF2                         <---------ATHB12 --------->YAB1 <---------ANAC46                            --------->ANAC58 ------ZmHOX2a(2)  --------->REM1(2)                        --------->ANAC58 ------->ARR14(2)<-------MYC3                              --------->DAG2 ----------------->TaNAC69(2)                             ---------->DOF2 --ARR14(2)<---------ALFIN1                         ----------->GT1   <------ZmHOX2a(2) --------ARR14(2)------->MYC3                   --------->LBD16--------->WOX13(1)         --------->GLK1(1) ======HOX2a_HOX2a--------->ALFIN1             <-----------RAV1(2)--------->YAB1   --------->GLK1(1)   ggatcatcacgcgccaccgcgtggagaaaaagcttgagttttcaaaattccaggtagtaaaaaagcaatcagatcgcagagagagaaatcgaaattccat  29457700                                        ------>NtERF2                                        --------->ORA47(1)                         =================HOX2a_HOX2a                         ==================HOX2a_HOX2a                         <------ZmHOX2a(1)    <---------GLK1(2)                        <----------ID1 ----------->HVH21                     <---------MYB52(1)--------->DEAR3(1)              --------->YAB1---------->DOF2   --------->ARR14(2)       -------->P                <---             ----------->TGA1          <---------ETT(1)           <---------ZAT14                ----             ----------->HVH21      ------>ZmHOX2a(2)             --------->ZAT14      --------------             <---------ATHB12      <------ZmHOX2a(2)   <---------MYB52(1)  --------->At4g35610   ----   tgaagcttatagccaatgacgacgttaggacaaagagatcgccgaccagatgctctcggtagtctcagtgttctaccagatgagaccatctgtgttcttc  29457800              --------->LBD16             --------->At4g35610              --------->ANAC46   <---------ANAC46     <---------ANAC58            <---------ANAC58     <---------ANAC58       --------->ZAT2<---------At4g35610   --------->ARR11(3)       --------->O2  <---------ZAT2                                        ----- ------HSFB2a(2)  <---------ARR11(3)      --------->ZAT2          ------>ZmHOX2a(1)          -------- ----->HSFB2a(2)  --------->ARR11(3)  <-----------HVH21--------->YAB1               ------>ZmHOX2a(2) ------->WRI1--------->LBD16<---------O2<-----------RAV1(2)       =========================HOX2a_HOX2a ----->HSFC1(1)--------->LBD16   <---------ANAC58     <---------YAB1     <-----------GT1  <----------   tcgaataccttgctccccgagatattgctcacctcgcttgtgtcagcaggttttctataattctcttcctaagattaacttattgatcgaattaacatca  29457900  Previous    Next  AGI:  At1g78270.1    Description:  ATUGT85A4 (UDP-GLUCOSYL TRANSFERASE 85A4); UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring hexosyl groups. similar to ATUGT85A1/UGT85A1 (UDP-GLUCOSYL TRANSFERASE 85A1), UDP-glycosyltransferase/ glucuronosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT1G22400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61708.1); similar to glycosyltransferase [Nicotiana tabacum] (GB:BAD93690.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 29455456    to: 29457310    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g78265.1    Description:  other RNA Range:  from: 29455665    to: 29457198    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g78280.1    Description:  transcription factor jumonji (jmjC) domain-containing protein. Identical to F-box protein At1g78280 [Arabidopsis Thaliana] (GB:Q9M9E8); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06550.1); similar to hypothetical protein OsI_011531 [Oryza sativa (indica cultivar-group)] (GB:EAY90298.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61686.1); similar to hypothetical protein OsJ_010658 [Oryza sativa (japonica cultivar-group)] (GB:EAZ27175.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Protein k Range:  from: 29457448    to: 29462266    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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