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Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                           --------->HSFC1(2)
       --------->REM1(1)   <---------HSFC1(2)
    --------->TOE1(3)      <---------HSFB2a(1)                --------->CCA1(2)
    --------->TOE2(3)      --------->HSFB2a(1)             ----------->GT1                         <
------->AtMYB61          <------ZmHOX2a(1)        --------->LBD16 --------->ANAC46           <------
------->YAB1       ----------->RAV1(2)           <---------HSFB2a(2)                    <----------DOF2
-->NtERF2     <----------DOF2   <----------DOF2  --------->HSFB2a(2)                ------>ZmHOX2a(1)
 
accataaccttcatcttctttagcctgaggagcttctttctcttgcatactcccagaaaaaatggatacaagggacacatttgtgtcctgactttccttt  29053300
                                                                                 ----------->RAV1(2)
                                                                            --------->AtMYB61     --
                           --------->WOX13(1)                       <---------At4g35610         <---
      --------->ZAT2   ----------->GT1                <----------DOF2      --------->MYB46(3)   ----
      <---------ZAT2  --------->ZAT6       <---------AHL20(2)       ----------->RAV1(2)  ------>ZmHOX2a(1)
---------ATHB12    <-----------GT1         --------->AHL20(2)       --------->At4g35610----------->RAV1(2)
----DOF2   ---------->ID1 ---------->DOF2 --------->AHL20(2)   <---------At4g35610  <---------ZAT2<-
 
ccatcatccagcttgttgcaatttaccagtaaatcagtatcacaaattaattcttgactttgttcaagctcacctgaaaccactccctgctcctgagtgt  29053400
                                                                             <---------At4g35610
                          <---------ICU4                                     --------->At4g35610
                          --------->YAB1                            --------->ARR14(2)
          <---------MYB52(2)                                        <---------ARR14(2)
          --------->MYB46(3)<---------YAB1                         <---------CCA1(2)
     ----------->GT1     <---------YAB1                           --------->LBD16
------->At4g35610      --------->YAB1                            --------->ANAC55(2)
------bZIP60(1)       <------ZmHOX2a(2)                <---------YAB1     <---------At4g35610
----->bZIP60(1)      --------->ARR11(3)   <---------ARR11(3)     --------->ANAC46
--------At4g35610    <---------ARR11(3)  <---------GLK1(2)      <---------LBD16           ----------
 
catcagcattgtaacaaacatatagatcatcatcagtgtttccagcatcttcttgactattactgttcccgtatcccatctgctcaatctctgtaaagca  29053500
                                            --------->ARR14(2)
                                            <---------ARR14(2)
                                            <---------GLK1(2)
                                           <------ZmHOX2a(1)
                              ---------->DOF2
                           --------->At4g35610
              --------->YAB1 <---------REM1(1)
 <----------DOF2 <---------TOE1(2)       <---------TOE2(3)                       --------->O2   <---
>DOF2---------->ID1        <---------At4g35610                   ------->TEIL    --------->ANAC46
 
cttcctttggccttcaatcgtatggtttacagatgaagcagtctgaggaatctccaaactactgactgaatctaaattttgcccacgagaactcaatttc  29053600
                                                                              <---------ALFIN1
                                                                             ------>MYB46(1)
                                                                             ------>MYB83
                                                                             -------->P
                                                                            ----------->RAV1(1)
         --------->ATHB12                                                  --------->AtMYB61
        <---------YAB1                    <---------ZAT6       <---------HSFB2a(2)
    --------->ARR11(3)             ------>NtERF2               --------->HSFB2a(2) <---------MYB52(1)
    <---------ARR11(3)       --------->CCA1(2)            <---------ZAT18 --------->MYB46(3)
   <---------GLK1(1)        --------->ARR14(2)        <---------ICU4  <-----------HVH21
------YAB1                  <---------ARR11(3)       <---------YAB1   <-----------TGA1   ------>ZmHOX2a(1)
 
tcatagaaatcttcattggtattcatcgcaagatttgaggccagagagttagcatcaatattgcacccagaagcgtcaccaacaccgttttccttacagt  29053700
                                                          <---------TOE2(3)
           <---------MYB59                              <---------AHL20(2)          --------->WOX13(1)
          ----------->RAV1(2)                 --------->DAG2                    ----------->GT1
         -------->P             <-----------GT1        <---------YAB1   --------->ANAC58           <
--------->YAB1    ---------->DOF2            ---------->DOF2            --------->ANAC58       -----
 
ccatcgtaatgctacctgattcaaagccaaacaaataacattctcaaaaaaagggatttttaatgaaaaatcagtaagctatttagtaaatcaaactatg  29053800
                                                                      --------->MYB52(1)
                                                                      ------>MYB83
                                                                      ------>MYB46(1)
                                                                    --------->AtMYB61
                        ------------>CBF                            <---------MYB59
                     --------->GLK1(2)                              ------->GAMYB
         <---------ARR11(3)                            ------>ZmHOX2a(2)
         --------->ARR11(3)                      --------->YAB1    --------->MYB46(3)
     ---------->DOF2<---------GLK1(2)--------->ZAT2  --------->ARR11(3)
<---------MYB46(3)  --------->ARR14(2)         <-----------GT1    -------->P
---------ATHB12     <---------ARR14(2)    --------->LBD16        --------->WOX13(1)
------->CBF <----------DOF2          <---------ZAT2  <---------ARR11(3)
 
caatggttcaaagacctttaacagattctcaatagaacccagccccgtattaacatgatctacaaaatcaaccaaacagagaccccaaaaaaaaaaaaaa  29053900
                                 --------->ANAC58
                           --------->MYB52(1)
                           ------>MYB83
                           ------>MYB46(1)
                         <---------MYB59                      --------->YAB1
                       <---------ARR11(3)                  <------------CBF
                       --------->ARR11(3)                <---------YAB1                         <---
                   ---------->DOF2                  --------->YAB1                      <---------YAB1
               <---------At4g35610                  <---------ICU4                    <---------At4g35610
               --------->At4g35610 ------------>CBF<---------ATHB12               ------>ZmHOX2a(2)
             <---------WRKY38(1) --------->ANAC58--------->WOX13(1)              --------->GLK1(1)
             <---------WRKY12--------->ZAT6    ------------>CBF                  <------ZmHOX2a(2)
 
aaaaaacttaagaaggtcaactcaaagacctaacacaagacaatggatggctcaatcatcaacattgatgacaaaaaccctccgatctcttctgatttta  29054000
         ------->GAMYB
      ----------->RAV1(1)
    <------NtERF2
    ------>NtERF2
    --------->LBD16
   --------->RAP2.3(3)
   --------->RRTF1(2)            <---------ARR11(3)
   --------->ANAC46              --------->ARR11(3)
   --------->DEAR3(1)         --------->AHL20(2)      <-----------GT1
   --------->RAP2.6(2)        <---------AHL20(2)      --------->MYB52(1)
   --------->RAP2.3(2)   --------->AHL20(2)    --------->LBD16
  --------->RAP2.3(1)    <---------AHL20(2)    ------>ZmHOX2a(1)             --------->YAB1
--------->ANAC46         --------->AHL20(1)  ----------->RAV1(2)           ------->TEIL
--------->ANAC58    --------->AHL20(2)    <---------At4g35610           <---------YAB1
--------->ANAC58    <---------AHL20(2)  <-----------GT1       --------->TOE1(3)
--------GT1         --------->AHL20(1)<-----------HVH21       --------->TOE2(3)--------->At4g35610 -
 
aacacgccgcaacagagactaaataaaataaaataaaatcttgtcacctcctgaaaataacgaaaccctaacctcatgaatcagaagcgattgagcgaat  29054100
      --------->TOE2(3)
     --------->ANAC58
     --------->ANAC58
     ----------->GT1
    ------->TEIL
   --------->MYB52(1)                                      <---------YAB1
  ------->GAMYB             ------->GAMYB        <------NtERF2
 <---------MYB55(2)        <---------ANAC46     --------->LBD16      --------->CCA1(2)
 <---------MYB52(2)       >>>>>>>>>MYB98       <---------ANAC46     <---------ARR14(2)
 --------->MYB46(3)      --------->MYB52(1)    <---------DEAR3(1)   --------->ARR11(3)         <----
-------->MYB52(1)       ----------->HVH21     <---------LBD16 <---------GLK1(1) <------ZmHOX2a(1)
 
gccaacgaacgtaaaactggagcacgagtaacggagaaaaccctagagaggcggagaagattacgatatcagatatagagagaggagaaggaatcggagg  29054200
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AGI:  At1g77300.1   
Description:  EFS (EARLY FLOWERING IN SHORT DAYS). Identical to Histone-lysine N-methyltransferase ASHH2 (ASHH2) [Arabidopsis Thaliana] (GB:Q2LAE1;GB:O80663;GB:Q56WW4); similar to ASHH1/SDG26 (ASH1-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G76710.1); similar to ASHH1/SDG26 (ASH1-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G76710.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61923.1); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain Zinc finger, CW-type; (InterPro:IPR011124); contains InterPro domain AWS (InterPro:IPR006560); contains InterPro domain SET; (InterPro:IPR001
Range:  from: 29044816    to: 29053704    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
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