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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
--------->
HSFC1(2)
--------->
REM1(1)
<---------
HSFC1(2)
--------->
TOE1(3)
<---------
HSFB2a(1)
--------->
CCA1(2)
--------->
TOE2(3)
--------->
HSFB2a(1)
----------->
GT1
<
------->
AtMYB61
<------
ZmHOX2a(1)
--------->
LBD16
--------->
ANAC46
<------
------->
YAB1
----------->
RAV1(2)
<---------
HSFB2a(2)
<----------
DOF2
-->
NtERF2
<----------
DOF2
<----------
DOF2
--------->
HSFB2a(2)
------>
ZmHOX2a(1)
accataaccttcatcttctttagcctgaggagcttctttctcttgcatactcccagaaaaaatggatacaagggacacatttgtgtcctgactttccttt
29053300
----------->
RAV1(2)
--------->
AtMYB61
--
--------->
WOX13(1)
<---------
At4g35610
<---
--------->
ZAT2
----------->
GT1
<----------
DOF2
--------->
MYB46(3)
----
<---------
ZAT2
--------->
ZAT6
<---------
AHL20(2)
----------->
RAV1(2)
------>
ZmHOX2a(1)
---------
ATHB12
<-----------
GT1
--------->
AHL20(2)
--------->
At4g35610
----------->
RAV1(2)
----
DOF2
---------->
ID1
---------->
DOF2
--------->
AHL20(2)
<---------
At4g35610
<---------
ZAT2
<-
ccatcatccagcttgttgcaatttaccagtaaatcagtatcacaaattaattcttgactttgttcaagctcacctgaaaccactccctgctcctgagtgt
29053400
<---------
At4g35610
<---------
ICU4
--------->
At4g35610
--------->
YAB1
--------->
ARR14(2)
<---------
MYB52(2)
<---------
ARR14(2)
--------->
MYB46(3)
<---------
YAB1
<---------
CCA1(2)
----------->
GT1
<---------
YAB1
--------->
LBD16
------->
At4g35610
--------->
YAB1
--------->
ANAC55(2)
------
bZIP60(1)
<------
ZmHOX2a(2)
<---------
YAB1
<---------
At4g35610
----->
bZIP60(1)
--------->
ARR11(3)
<---------
ARR11(3)
--------->
ANAC46
--------
At4g35610
<---------
ARR11(3)
<---------
GLK1(2)
<---------
LBD16
----------
catcagcattgtaacaaacatatagatcatcatcagtgtttccagcatcttcttgactattactgttcccgtatcccatctgctcaatctctgtaaagca
29053500
--------->
ARR14(2)
<---------
ARR14(2)
<---------
GLK1(2)
<------
ZmHOX2a(1)
---------->
DOF2
--------->
At4g35610
--------->
YAB1
<---------
REM1(1)
<----------
DOF2
<---------
TOE1(2)
<---------
TOE2(3)
--------->
O2
<---
>
DOF2
---------->
ID1
<---------
At4g35610
------->
TEIL
--------->
ANAC46
cttcctttggccttcaatcgtatggtttacagatgaagcagtctgaggaatctccaaactactgactgaatctaaattttgcccacgagaactcaatttc
29053600
<---------
ALFIN1
------>
MYB46(1)
------>
MYB83
-------->
P
----------->
RAV1(1)
--------->
ATHB12
--------->
AtMYB61
<---------
YAB1
<---------
ZAT6
<---------
HSFB2a(2)
--------->
ARR11(3)
------>
NtERF2
--------->
HSFB2a(2)
<---------
MYB52(1)
<---------
ARR11(3)
--------->
CCA1(2)
<---------
ZAT18
--------->
MYB46(3)
<---------
GLK1(1)
--------->
ARR14(2)
<---------
ICU4
<-----------
HVH21
------
YAB1
<---------
ARR11(3)
<---------
YAB1
<-----------
TGA1
------>
ZmHOX2a(1)
tcatagaaatcttcattggtattcatcgcaagatttgaggccagagagttagcatcaatattgcacccagaagcgtcaccaacaccgttttccttacagt
29053700
<---------
TOE2(3)
<---------
MYB59
<---------
AHL20(2)
--------->
WOX13(1)
----------->
RAV1(2)
--------->
DAG2
----------->
GT1
-------->
P
<-----------
GT1
<---------
YAB1
--------->
ANAC58
<
--------->
YAB1
---------->
DOF2
---------->
DOF2
--------->
ANAC58
-----
ccat
cgtaatgctacctgattcaaagccaaacaaataacattctcaaaaaaagggatttttaatgaaaaatcagtaagctatttagtaaatcaaactatg
29053800
--------->
MYB52(1)
------>
MYB83
------>
MYB46(1)
--------->
AtMYB61
------------>
CBF
<---------
MYB59
--------->
GLK1(2)
------->
GAMYB
<---------
ARR11(3)
------>
ZmHOX2a(2)
--------->
ARR11(3)
--------->
YAB1
--------->
MYB46(3)
---------->
DOF2
<---------
GLK1(2)
--------->
ZAT2
--------->
ARR11(3)
<---------
MYB46(3)
--------->
ARR14(2)
<-----------
GT1
-------->
P
---------
ATHB12
<---------
ARR14(2)
--------->
LBD16
--------->
WOX13(1)
------->
CBF
<----------
DOF2
<---------
ZAT2
<---------
ARR11(3)
caatggttcaaagacctttaacagattctcaatagaacccagccccgtattaacatgatctacaaaatcaaccaaacagagaccccaaaaaaaaaaaaaa
29053900
--------->
ANAC58
--------->
MYB52(1)
------>
MYB83
------>
MYB46(1)
<---------
MYB59
--------->
YAB1
<---------
ARR11(3)
<------------
CBF
--------->
ARR11(3)
<---------
YAB1
<---
---------->
DOF2
--------->
YAB1
<---------
YAB1
<---------
At4g35610
<---------
ICU4
<---------
At4g35610
--------->
At4g35610
------------>
CBF
<---------
ATHB12
------>
ZmHOX2a(2)
<---------
WRKY38(1)
--------->
ANAC58
--------->
WOX13(1)
--------->
GLK1(1)
<---------
WRKY12
--------->
ZAT6
------------>
CBF
<------
ZmHOX2a(2)
aaaaaacttaagaaggtcaactcaaagacctaacacaagacaatggatggctcaatcatcaacattgatgacaaaaaccctccgatctcttctgatttta
29054000
------->
GAMYB
----------->
RAV1(1)
<------
NtERF2
------>
NtERF2
--------->
LBD16
--------->
RAP2.3(3)
--------->
RRTF1(2)
<---------
ARR11(3)
--------->
ANAC46
--------->
ARR11(3)
--------->
DEAR3(1)
--------->
AHL20(2)
<-----------
GT1
--------->
RAP2.6(2)
<---------
AHL20(2)
--------->
MYB52(1)
--------->
RAP2.3(2)
--------->
AHL20(2)
--------->
LBD16
--------->
RAP2.3(1)
<---------
AHL20(2)
------>
ZmHOX2a(1)
--------->
YAB1
--------->
ANAC46
--------->
AHL20(1)
----------->
RAV1(2)
------->
TEIL
--------->
ANAC58
--------->
AHL20(2)
<---------
At4g35610
<---------
YAB1
--------->
ANAC58
<---------
AHL20(2)
<-----------
GT1
--------->
TOE1(3)
--------
GT1
--------->
AHL20(1)
<-----------
HVH21
--------->
TOE2(3)
--------->
At4g35610
-
aacacgccgcaacagagactaaataaaataaaataaaatcttgtcacctcctgaaaataacgaaaccctaacctcatgaatcagaagcgattgagcgaat
29054100
--------->
TOE2(3)
--------->
ANAC58
--------->
ANAC58
----------->
GT1
------->
TEIL
--------->
MYB52(1)
<---------
YAB1
------->
GAMYB
------->
GAMYB
<------
NtERF2
<---------
MYB55(2)
<---------
ANAC46
--------->
LBD16
--------->
CCA1(2)
<---------
MYB52(2)
>>>>>>>>>
MYB98
<---------
ANAC46
<---------
ARR14(2)
--------->
MYB46(3)
--------->
MYB52(1)
<---------
DEAR3(1)
--------->
ARR11(3)
<----
-------->
MYB52(1)
----------->
HVH21
<---------
LBD16
<---------
GLK1(1)
<------
ZmHOX2a(1)
gccaacgaacgtaaaactggagcacgagtaacggagaaaaccctagagaggcggagaagattacgatatcagatatagagagaggagaaggaatcggagg
29054200
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AGI:
At1g77300.1
Description:
EFS (EARLY FLOWERING IN SHORT DAYS). Identical to Histone-lysine N-methyltransferase ASHH2 (ASHH2) [Arabidopsis Thaliana] (GB:Q2LAE1;GB:O80663;GB:Q56WW4); similar to ASHH1/SDG26 (ASH1-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G76710.1); similar to ASHH1/SDG26 (ASH1-RELATED PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT1G76710.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61923.1); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain Zinc finger, CW-type; (InterPro:IPR011124); contains InterPro domain AWS (InterPro:IPR006560); contains InterPro domain SET; (InterPro:IPR001
Range:
from: 29044816
to: 29053704
Orientation: Reverse
Links:
TAIR
MIPS
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when using AthaMap.
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